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The map label for this gene is yhaM [C]

Identifier: 126209069

GI number: 126209069

Start: 1833350

End: 1834648

Strand: Reverse

Name: yhaM [C]

Synonym: APL_1605

Alternate gene names: 126209069

Gene position: 1834648-1833350 (Counterclockwise)

Preceding gene: 126209071

Following gene: 126209068

Centisome position: 80.66

GC content: 45.65

Gene sequence:

>1299_bases
ATGAAGTTTAAATCGGAATTAGAACAAGCGATTATTGCCACCGTACAACAAGAAGTTGTACCGGCACTGGGTTGTACCGA
ACCTGTTTCTTTGGCGTTAGCAGCGGCGGTTGCTCGTCAATATTTAGGCGCATTACCGGATCGGATCGAGGCTAAAGTTT
CGCCGAATTTGATGAAAAACGGTATGGGGGTAACCGTTCCCGGGACGGGTACGGTCGGTTTAACTATGGCAGCGGCAATC
GGGGCAATCGGCGGTGATCCGAATGGCGGATTGGAAGTGCTTAAACATATTACCAACGAGCAAGTGGCACTGGCGAAACA
AATGATCAACGATCATAAAATCGAAGTGAGTATTTCCGATACCGAACATATTCTCTATTCCGAAGCCACACTGTTTAATA
CCGATCAGCAAGTCAAAGTGCGTATCGCCGCTCATCATACCAATGTGATTTATATTGAGAAAAACGGCGAATTACTGTTT
TCCAAGCCTTGCGTAGTAGAAAGTGAAAATGCGGAAAATGTTTTCGCAAACTTAAATGCGAAAGATATTTATGATTTTTC
TTTAAATGTGGAGCTGGAGAAGATTCGCTTTATTCAACAGGCGGCAATTTTAAATAGTGCGCTTTCACAAGAAGGGCTGA
ATCAAGATTACGGTTTACATATCGGGCGTACCTTGCAAAAACAAATTGGTAAAGGATTAATTAGCGATGATTTGCTTAAT
CGTATCGTGATTGAAACTACCGCTGCCAGCGATGCACGCATGGGCGGCGCAAATTTACCGGCGATGAGTAATTCCGGCTC
GGGTAACCAAGGCATTACTGCGACAATGCCGGTAGTCGTGGTCGCTCGCCATGTAGCCGCCGGCGAAGAACAACTTATTC
GAGCTTTATTTCTTTCGCATTTAATGGCGATTTATATTCATAGCAAATTACCGAAACTCTCGGCGTTATGTGCGGTCACT
ACGGCGGCAATGGGCAGCTGTGCCGGCGTCGCATGGTTATTAACCGGTAAATTTGAAGCGATCAGTATGGCAATCAGCAG
TATGATCGGCGACATCAGCGGCATTATTTGTGACGGTGCGGCAAATAGCTGTGCGATGAAAGTTTCAACCAGTGTCAGTT
CGAGCTATAAATCGATTTTAATGGCGTTGGACGATACGCAAGTCACCGGCAACGAAGGGATTGTCGAACACCAAATCGAC
CGTTCGATCAACAACCTTTGTGCGATAGCTTCCCGCAGTATGCAATATACTGATCGCCAAGTGATTGAGATTATGGTGAG
CAAGCCGAAAAGCCTGTAA

Upstream 100 bases:

>100_bases
ATTAAACGGTGGCGTATAATACGGCTTTTTTAGTAAAATTTTATTTCGATAAATTTTTATAATAACAATATCACGCATTA
ATAATTAAGGATAACACTCA

Downstream 100 bases:

>100_bases
TTTAGGAATTTAAAAAGCGACAAGCGGTAGAATTTACCAAAAATTTAGTAAATTTTACCGCTTATTTTTTTATTTAGCCG
TCTAGACGTGTACATTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MKFKSELEQAIIATVQQEVVPALGCTEPVSLALAAAVARQYLGALPDRIEAKVSPNLMKNGMGVTVPGTGTVGLTMAAAI
GAIGGDPNGGLEVLKHITNEQVALAKQMINDHKIEVSISDTEHILYSEATLFNTDQQVKVRIAAHHTNVIYIEKNGELLF
SKPCVVESENAENVFANLNAKDIYDFSLNVELEKIRFIQQAAILNSALSQEGLNQDYGLHIGRTLQKQIGKGLISDDLLN
RIVIETTAASDARMGGANLPAMSNSGSGNQGITATMPVVVVARHVAAGEEQLIRALFLSHLMAIYIHSKLPKLSALCAVT
TAAMGSCAGVAWLLTGKFEAISMAISSMIGDISGIICDGAANSCAMKVSTSVSSSYKSILMALDDTQVTGNEGIVEHQID
RSINNLCAIASRSMQYTDRQVIEIMVSKPKSL

Sequences:

>Translated_432_residues
MKFKSELEQAIIATVQQEVVPALGCTEPVSLALAAAVARQYLGALPDRIEAKVSPNLMKNGMGVTVPGTGTVGLTMAAAI
GAIGGDPNGGLEVLKHITNEQVALAKQMINDHKIEVSISDTEHILYSEATLFNTDQQVKVRIAAHHTNVIYIEKNGELLF
SKPCVVESENAENVFANLNAKDIYDFSLNVELEKIRFIQQAAILNSALSQEGLNQDYGLHIGRTLQKQIGKGLISDDLLN
RIVIETTAASDARMGGANLPAMSNSGSGNQGITATMPVVVVARHVAAGEEQLIRALFLSHLMAIYIHSKLPKLSALCAVT
TAAMGSCAGVAWLLTGKFEAISMAISSMIGDISGIICDGAANSCAMKVSTSVSSSYKSILMALDDTQVTGNEGIVEHQID
RSINNLCAIASRSMQYTDRQVIEIMVSKPKSL
>Mature_432_residues
MKFKSELEQAIIATVQQEVVPALGCTEPVSLALAAAVARQYLGALPDRIEAKVSPNLMKNGMGVTVPGTGTVGLTMAAAI
GAIGGDPNGGLEVLKHITNEQVALAKQMINDHKIEVSISDTEHILYSEATLFNTDQQVKVRIAAHHTNVIYIEKNGELLF
SKPCVVESENAENVFANLNAKDIYDFSLNVELEKIRFIQQAAILNSALSQEGLNQDYGLHIGRTLQKQIGKGLISDDLLN
RIVIETTAASDARMGGANLPAMSNSGSGNQGITATMPVVVVARHVAAGEEQLIRALFLSHLMAIYIHSKLPKLSALCAVT
TAAMGSCAGVAWLLTGKFEAISMAISSMIGDISGIICDGAANSCAMKVSTSVSSSYKSILMALDDTQVTGNEGIVEHQID
RSINNLCAIASRSMQYTDRQVIEIMVSKPKSL

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family

Homologues:

Organism=Escherichia coli, GI48994923, Length=428, Percent_Identity=60.5140186915888, Blast_Score=468, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1605_ACTP2 (A3N2Q3)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001054294.1
- STRING:   A3N2Q3
- GeneID:   4849629
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_1605
- eggNOG:   COG3681
- HOGENOM:   HBG296671
- OMA:   LSGMICD
- PhylomeDB:   A3N2Q3
- ProtClustDB:   CLSK965649
- BioCyc:   APLE416269:APL_1605-MONOMER
- HAMAP:   MF_01845
- InterPro:   IPR005130
- InterPro:   IPR021144
- PIRSF:   PIRSF006054

Pfam domain/function: PF03313 SDH_alpha

EC number: NA

Molecular weight: Translated: 45937; Mature: 45937

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00104 EPSP_SYNTHASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKSELEQAIIATVQQEVVPALGCTEPVSLALAAAVARQYLGALPDRIEAKVSPNLMKN
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHC
GMGVTVPGTGTVGLTMAAAIGAIGGDPNGGLEVLKHITNEQVALAKQMINDHKIEVSISD
CCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECC
TEHILYSEATLFNTDQQVKVRIAAHHTNVIYIEKNGELLFSKPCVVESENAENVFANLNA
CCEEEEECCEEECCCCEEEEEEEEECCEEEEEECCCCEEEECCCEEECCCCCCEEEECCC
KDIYDFSLNVELEKIRFIQQAAILNSALSQEGLNQDYGLHIGRTLQKQIGKGLISDDLLN
CEEEEEEECEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
RIVIETTAASDARMGGANLPAMSNSGSGNQGITATMPVVVVARHVAAGEEQLIRALFLSH
HEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHH
LMAIYIHSKLPKLSALCAVTTAAMGSCAGVAWLLTGKFEAISMAISSMIGDISGIICDGA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCEEECCC
ANSCAMKVSTSVSSSYKSILMALDDTQVTGNEGIVEHQIDRSINNLCAIASRSMQYTDRQ
CCCEEEEEEHHHHHHHHHHHHEECCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
VIEIMVSKPKSL
HHHHHHCCCCCC
>Mature Secondary Structure
MKFKSELEQAIIATVQQEVVPALGCTEPVSLALAAAVARQYLGALPDRIEAKVSPNLMKN
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHC
GMGVTVPGTGTVGLTMAAAIGAIGGDPNGGLEVLKHITNEQVALAKQMINDHKIEVSISD
CCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECC
TEHILYSEATLFNTDQQVKVRIAAHHTNVIYIEKNGELLFSKPCVVESENAENVFANLNA
CCEEEEECCEEECCCCEEEEEEEEECCEEEEEECCCCEEEECCCEEECCCCCCEEEECCC
KDIYDFSLNVELEKIRFIQQAAILNSALSQEGLNQDYGLHIGRTLQKQIGKGLISDDLLN
CEEEEEEECEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
RIVIETTAASDARMGGANLPAMSNSGSGNQGITATMPVVVVARHVAAGEEQLIRALFLSH
HEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHH
LMAIYIHSKLPKLSALCAVTTAAMGSCAGVAWLLTGKFEAISMAISSMIGDISGIICDGA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHCEEECCC
ANSCAMKVSTSVSSSYKSILMALDDTQVTGNEGIVEHQIDRSINNLCAIASRSMQYTDRQ
CCCEEEEEEHHHHHHHHHHHHEECCCEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
VIEIMVSKPKSL
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA