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The map label for this gene is kpsF [C]

Identifier: 126209040

GI number: 126209040

Start: 1802526

End: 1803461

Strand: Reverse

Name: kpsF [C]

Synonym: APL_1576

Alternate gene names: 126209040

Gene position: 1803461-1802526 (Counterclockwise)

Preceding gene: 126209041

Following gene: 126209039

Centisome position: 79.29

GC content: 34.83

Gene sequence:

>936_bases
ATGAATTACTTAGCAAGTGCTAGAGAAACATTATCTTTATATACTCAAGCAATAGATAGTTTACATAATCGCTTATCTAC
TGAGTTTAATCAAGCTATTGAAATGATTTTATCTTGTGAGGGACGTTTAGTTGTTGCTGGTATTGGTAAATCAGGTTTAG
TTGGTCAGAAAATGGTTGCTACTTTTGCTTCTACGGGAACACCAAGTTTCTTTTTACATCCAACCGAGGCATTTCACGGT
GATTTGGGGATGTTAAAACCCATCGATATCGTCATTCTTATTTCAAATAGTGGTGAAACTGATGACGTAAATAAATTAAT
TCCTAGCCTGAAAGGTTTTGGTAATAAAATTATTGCAATGACAGGTAATTCTCATTCAACCCTAGCACAGCATGCTGATA
TTATTTTAAATATTGGCGTAGAAAAAGAAGCCTGTACAAATAATCTGGCTCCAACAACGTCCACATTAGTAACTATGGCA
CTAGGAGATGCACTTGCGATTGCTTTAATTAAAGCAAGAAACTTCCAAGCTATGGACTTTGCTCGTTTTCATCCGGGTGG
CAGTTTAGGGCGAAAATTACTCTGTACGGTTAAAGATGTAATGATTAGATCATTACCAATAGTTTCTCCAACGGCAATAT
TTAGCGAATGTTTAAATATAATGAATGAAGGTCGAATAGGCGTTGCTCTAGTTATGGAACATGACTGTTTACTGGGAATT
ATTACTGATGGGGATATTCGTCGTTTATTAGCTGATAAAGGAGCTAATAGTTTGTTAATGACAGCTGATCAAATTATGAC
GAAGAATCCTAAAACTATCCTAGAAAGTACTTTTCTTGCTAAAGCGGAAGAAGAGATGAAATCATTGCATGTACATTCAT
TAGTTGTAATGAATGAAGAAAACAGAGTTGTAGGTATATTTGAATTTTCAAATTAG

Upstream 100 bases:

>100_bases
ACTTAGATATTGCATTAGAAACGCCTGAAGTTGGTGTTGATACGCAAGAAGATTTAGAGCGAGTTCGTTTAATTTTATCA
AATAAATAAGGCTATAAAAT

Downstream 100 bases:

>100_bases
AATTATTATAGGATATTATGTTCAAAAAAATCACTTTATTCAGTTTTATCGCGTTAATCGCCGGTTGCTCTTCTTCCTCA
CAACTGGAAACTTTCCCTGG

Product: arabinose-5-phosphate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNYLASARETLSLYTQAIDSLHNRLSTEFNQAIEMILSCEGRLVVAGIGKSGLVGQKMVATFASTGTPSFFLHPTEAFHG
DLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKIIAMTGNSHSTLAQHADIILNIGVEKEACTNNLAPTTSTLVTMA
LGDALAIALIKARNFQAMDFARFHPGGSLGRKLLCTVKDVMIRSLPIVSPTAIFSECLNIMNEGRIGVALVMEHDCLLGI
ITDGDIRRLLADKGANSLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLVVMNEENRVVGIFEFSN

Sequences:

>Translated_311_residues
MNYLASARETLSLYTQAIDSLHNRLSTEFNQAIEMILSCEGRLVVAGIGKSGLVGQKMVATFASTGTPSFFLHPTEAFHG
DLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKIIAMTGNSHSTLAQHADIILNIGVEKEACTNNLAPTTSTLVTMA
LGDALAIALIKARNFQAMDFARFHPGGSLGRKLLCTVKDVMIRSLPIVSPTAIFSECLNIMNEGRIGVALVMEHDCLLGI
ITDGDIRRLLADKGANSLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLVVMNEENRVVGIFEFSN
>Mature_311_residues
MNYLASARETLSLYTQAIDSLHNRLSTEFNQAIEMILSCEGRLVVAGIGKSGLVGQKMVATFASTGTPSFFLHPTEAFHG
DLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKIIAMTGNSHSTLAQHADIILNIGVEKEACTNNLAPTTSTLVTMA
LGDALAIALIKARNFQAMDFARFHPGGSLGRKLLCTVKDVMIRSLPIVSPTAIFSECLNIMNEGRIGVALVMEHDCLLGI
ITDGDIRRLLADKGANSLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLVVMNEENRVVGIFEFSN

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=303, Percent_Identity=41.9141914191419, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI87082151, Length=313, Percent_Identity=39.9361022364217, Blast_Score=219, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 33603; Mature: 33603

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLASARETLSLYTQAIDSLHNRLSTEFNQAIEMILSCEGRLVVAGIGKSGLVGQKMVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH
TFASTGTPSFFLHPTEAFHGDLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKIIAM
HHHCCCCCEEEECCHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
TGNSHSTLAQHADIILNIGVEKEACTNNLAPTTSTLVTMALGDALAIALIKARNFQAMDF
ECCCCHHHHHCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ARFHPGGSLGRKLLCTVKDVMIRSLPIVSPTAIFSECLNIMNEGRIGVALVMEHDCLLGI
HEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCEEEEE
ITDGDIRRLLADKGANSLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLVVMNEE
EECHHHHHHHHHCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
NRVVGIFEFSN
CCEEEEEEECC
>Mature Secondary Structure
MNYLASARETLSLYTQAIDSLHNRLSTEFNQAIEMILSCEGRLVVAGIGKSGLVGQKMVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH
TFASTGTPSFFLHPTEAFHGDLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKIIAM
HHHCCCCCEEEECCHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
TGNSHSTLAQHADIILNIGVEKEACTNNLAPTTSTLVTMALGDALAIALIKARNFQAMDF
ECCCCHHHHHCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ARFHPGGSLGRKLLCTVKDVMIRSLPIVSPTAIFSECLNIMNEGRIGVALVMEHDCLLGI
HEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCEEEEE
ITDGDIRRLLADKGANSLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLVVMNEE
EECHHHHHHHHHCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
NRVVGIFEFSN
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]