| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126209039
Identifier: 126209039
GI number: 126209039
Start: 1801954
End: 1802508
Strand: Reverse
Name: 126209039
Synonym: APL_1575
Alternate gene names: NA
Gene position: 1802508-1801954 (Counterclockwise)
Preceding gene: 126209040
Following gene: 126209037
Centisome position: 79.25
GC content: 41.98
Gene sequence:
>555_bases ATGTTCAAAAAAATCACTTTATTCAGTTTTATCGCGTTAATCGCCGGTTGCTCTTCTTCCTCACAACTGGAAACTTTCCC TGGGGAGTTTGCGAATGCGGATTATGTGTTATCGGACAAGGATGCCCAGCGTTGGGTGGTGGCGAGCCGTCAGGTGGAGC AGTGTATTTATCCGAACTTGACGCGGATTCAGCAGCAAGCGTTTAGCAAGGAAGATTCATATATTCATTCGCAATACGTA TTTTTCTATCCGTTGGAAGAAATTATCGGCGAGCAGTATGTAAAAATTATCCAAGACGATGAAAAATCTATGGGATATGC GCAATACTTGTTTAAGAAATTCAGAGATAATCAGGAATTCGAGCCGTTAGCGGATAAGCAATGTCTTGTGTTGCGAGAAA AAGCGAAGAACGATTTAGCGGTCGTAAAAGGGCAGTATAAGAGCGGAATGGTTGAAGAAACGAAGTCCGAAGCTAAAAAT GCGGACGGCGTGGCGACCAATCAAAATAAATTCTTCTTTGATATTATCAAATGGGGTTCGATGCTATTACTGTAA
Upstream 100 bases:
>100_bases AGATGAAATCATTGCATGTACATTCATTAGTTGTAATGAATGAAGAAAACAGAGTTGTAGGTATATTTGAATTTTCAAAT TAGAATTATTATAGGATATT
Downstream 100 bases:
>100_bases TTTGCGGTTAGTGTGACGTTAAAGAGTATAAAAACGAGCTGTCGGTAAATCGTTATCGGCAGCTCTTTTTATTAGTTTGA TATTTGTTTGATTAACTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MFKKITLFSFIALIAGCSSSSQLETFPGEFANADYVLSDKDAQRWVVASRQVEQCIYPNLTRIQQQAFSKEDSYIHSQYV FFYPLEEIIGEQYVKIIQDDEKSMGYAQYLFKKFRDNQEFEPLADKQCLVLREKAKNDLAVVKGQYKSGMVEETKSEAKN ADGVATNQNKFFFDIIKWGSMLLL
Sequences:
>Translated_184_residues MFKKITLFSFIALIAGCSSSSQLETFPGEFANADYVLSDKDAQRWVVASRQVEQCIYPNLTRIQQQAFSKEDSYIHSQYV FFYPLEEIIGEQYVKIIQDDEKSMGYAQYLFKKFRDNQEFEPLADKQCLVLREKAKNDLAVVKGQYKSGMVEETKSEAKN ADGVATNQNKFFFDIIKWGSMLLL >Mature_184_residues MFKKITLFSFIALIAGCSSSSQLETFPGEFANADYVLSDKDAQRWVVASRQVEQCIYPNLTRIQQQAFSKEDSYIHSQYV FFYPLEEIIGEQYVKIIQDDEKSMGYAQYLFKKFRDNQEFEPLADKQCLVLREKAKNDLAVVKGQYKSGMVEETKSEAKN ADGVATNQNKFFFDIIKWGSMLLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21242; Mature: 21242
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKITLFSFIALIAGCSSSSQLETFPGEFANADYVLSDKDAQRWVVASRQVEQCIYPNL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCH TRIQQQAFSKEDSYIHSQYVFFYPLEEIIGEQYVKIIQDDEKSMGYAQYLFKKFRDNQEF HHHHHHHHCCCCCCHHHHEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC EPLADKQCLVLREKAKNDLAVVKGQYKSGMVEETKSEAKNADGVATNQNKFFFDIIKWGS CCCCCCHHHHHHHHCCCCCEEEECCHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH MLLL HHCC >Mature Secondary Structure MFKKITLFSFIALIAGCSSSSQLETFPGEFANADYVLSDKDAQRWVVASRQVEQCIYPNL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCH TRIQQQAFSKEDSYIHSQYVFFYPLEEIIGEQYVKIIQDDEKSMGYAQYLFKKFRDNQEF HHHHHHHHCCCCCCHHHHEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC EPLADKQCLVLREKAKNDLAVVKGQYKSGMVEETKSEAKNADGVATNQNKFFFDIIKWGS CCCCCCHHHHHHHHCCCCCEEEECCHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH MLLL HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]