| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is 126208986
Identifier: 126208986
GI number: 126208986
Start: 1735867
End: 1736466
Strand: Reverse
Name: 126208986
Synonym: APL_1522
Alternate gene names: NA
Gene position: 1736466-1735867 (Counterclockwise)
Preceding gene: 126208987
Following gene: 126208976
Centisome position: 76.35
GC content: 47.0
Gene sequence:
>600_bases ATGATTTTATTATTTGGAGCCAACGGCTTAGCCGGACGTGCATTACTGGAAGCGGCCGAACAACCGATCGTCTCTGTATT GCGCCGACCTTCGGACGATCCGTTTTTTGCAGATCGCCAAACGGCGGTTGCCGATGTAATGTCACCGGAAGCTTGTGAGG CAGTCATTCAACAGTATGCGCCGAAAGTGGTAATCAGCTATATCGGTGGTAAAAAAGAGGGTGTACGCAGCGATGCCGCC GGCAATATCAATATTATTCGTGCCATGCTGAAATATGCGCCTACCGCTCGTTTTATTTTTATTACCAGTATGGGTTGCGG CGAGCAATGGGAATTTGTATCCGAACGAGGGAAACAAGTACTGGGAGAAGCGTTACGAGAAAAAACACAGGCGGAAAACC TACTGCGTGAAAGTGCGCTAAATTGGACGATTCTCCGCCCGTGCGGACTGAATACGGACGAAGGCGAAACCTTTCGTTTA ATCGAAAATGCGACGGAAATACCTAAGTGCTATATGAGCCGTAATGCATTGGCAAAAGCGGTGCTATGTGTACTCGAACG TCAAGATCTCAATCATAAAATTTTATCTGTGATGCAATAA
Upstream 100 bases:
>100_bases AAGGCGGTGCAATGTTTAAAATCTTTGTCGGACGTGATGAAGATCGCAATTTACGCCAAAATCAAATCGACTTTATGCGT CAATTAATTAAGGGTGAGTA
Downstream 100 bases:
>100_bases GTGTAGAAAAGCAAGCGGTTGTTTTTAGCAAAATTTTTACCAAAAACAACCGCTTGTAAGAGGGTAAATTAACGCTCGAT TTTAGAACGAATCAATTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MILLFGANGLAGRALLEAAEQPIVSVLRRPSDDPFFADRQTAVADVMSPEACEAVIQQYAPKVVISYIGGKKEGVRSDAA GNINIIRAMLKYAPTARFIFITSMGCGEQWEFVSERGKQVLGEALREKTQAENLLRESALNWTILRPCGLNTDEGETFRL IENATEIPKCYMSRNALAKAVLCVLERQDLNHKILSVMQ
Sequences:
>Translated_199_residues MILLFGANGLAGRALLEAAEQPIVSVLRRPSDDPFFADRQTAVADVMSPEACEAVIQQYAPKVVISYIGGKKEGVRSDAA GNINIIRAMLKYAPTARFIFITSMGCGEQWEFVSERGKQVLGEALREKTQAENLLRESALNWTILRPCGLNTDEGETFRL IENATEIPKCYMSRNALAKAVLCVLERQDLNHKILSVMQ >Mature_199_residues MILLFGANGLAGRALLEAAEQPIVSVLRRPSDDPFFADRQTAVADVMSPEACEAVIQQYAPKVVISYIGGKKEGVRSDAA GNINIIRAMLKYAPTARFIFITSMGCGEQWEFVSERGKQVLGEALREKTQAENLLRESALNWTILRPCGLNTDEGETFRL IENATEIPKCYMSRNALAKAVLCVLERQDLNHKILSVMQ
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22004; Mature: 22004
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLFGANGLAGRALLEAAEQPIVSVLRRPSDDPFFADRQTAVADVMSPEACEAVIQQYA CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHC PKVVISYIGGKKEGVRSDAAGNINIIRAMLKYAPTARFIFITSMGCGEQWEFVSERGKQV HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHH LGEALREKTQAENLLRESALNWTILRPCGLNTDEGETFRLIENATEIPKCYMSRNALAKA HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLCVLERQDLNHKILSVMQ HHHHHHHCCCHHHHHHHCC >Mature Secondary Structure MILLFGANGLAGRALLEAAEQPIVSVLRRPSDDPFFADRQTAVADVMSPEACEAVIQQYA CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHC PKVVISYIGGKKEGVRSDAAGNINIIRAMLKYAPTARFIFITSMGCGEQWEFVSERGKQV HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHH LGEALREKTQAENLLRESALNWTILRPCGLNTDEGETFRLIENATEIPKCYMSRNALAKA HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLCVLERQDLNHKILSVMQ HHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA