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The map label for this gene is yobD [C]

Identifier: 126208858

GI number: 126208858

Start: 1595099

End: 1595557

Strand: Direct

Name: yobD [C]

Synonym: APL_1394

Alternate gene names: 126208858

Gene position: 1595099-1595557 (Clockwise)

Preceding gene: 126208857

Following gene: 126208859

Centisome position: 70.13

GC content: 35.29

Gene sequence:

>459_bases
ATGACAAATTTTATTCTTTTGGTGGGTATTATTGCCGTGATACTGTTCGCTATCTACGATCAAAGTATTATGCCTAAGTT
AAAAGGTGAAACCAAACTTGCCGTACGCTTACAAAAACAAGTTAAAGCCGATGCATGGATCCTAATCGGTTTGATTATCT
TGCCGATCATTTACGGTATTCAAAACGGGATTGAAGCATTAACCATTTACTTGTTAGCCTTTTCGATTATACTCTGTATC
TATACTGCCTTTTTACGTTCGCCTTATTTGCTATTAAAAGAGAGCGGCTTCTTCTTCGGCAATATCTTTTTCGAGTATAA
AAATATCGTACAAATTAATCTGGCTGACAATAATATCTTAGTCATCGATTTAAAAAGCGGCAGACGTTTACTCGTGCGTA
TTCAAGAGAAAGAAGATATTGAAAAAGTCGTGAACTTCTTTGGAGGATATAAACAATGA

Upstream 100 bases:

>100_bases
AATAAATATCTAAACCACTAAGCGGTCATATTTTTATCAAATTTTGCAAATTTTTGACGAAAAATGACCGCTTGTTTCTT
TTTATTTTCGGATCGCACAA

Downstream 100 bases:

>100_bases
TTTTTAAACTAAAAGGGAAATTTCAGCATTATGTTTGGGGAGGTATGAACTTTATCCCGAATTTCCTTAAGTTATCCGAT
CCCGATGACAAACCTTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTNFILLVGIIAVILFAIYDQSIMPKLKGETKLAVRLQKQVKADAWILIGLIILPIIYGIQNGIEALTIYLLAFSIILCI
YTAFLRSPYLLLKESGFFFGNIFFEYKNIVQINLADNNILVIDLKSGRRLLVRIQEKEDIEKVVNFFGGYKQ

Sequences:

>Translated_152_residues
MTNFILLVGIIAVILFAIYDQSIMPKLKGETKLAVRLQKQVKADAWILIGLIILPIIYGIQNGIEALTIYLLAFSIILCI
YTAFLRSPYLLLKESGFFFGNIFFEYKNIVQINLADNNILVIDLKSGRRLLVRIQEKEDIEKVVNFFGGYKQ
>Mature_151_residues
TNFILLVGIIAVILFAIYDQSIMPKLKGETKLAVRLQKQVKADAWILIGLIILPIIYGIQNGIEALTIYLLAFSIILCIY
TAFLRSPYLLLKESGFFFGNIFFEYKNIVQINLADNNILVIDLKSGRRLLVRIQEKEDIEKVVNFFGGYKQ

Specific function: Unknown

COG id: COG4811

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0266 family [H]

Homologues:

Organism=Escherichia coli, GI1788123, Length=143, Percent_Identity=37.0629370629371, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009328
- ProDom:   PD091196 [H]

Pfam domain/function: PF06173 DUF986 [H]

EC number: NA

Molecular weight: Translated: 17363; Mature: 17232

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFILLVGIIAVILFAIYDQSIMPKLKGETKLAVRLQKQVKADAWILIGLIILPIIYGI
CCHHHHHHHHHHHHHHHHHCHHHCHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
QNGIEALTIYLLAFSIILCIYTAFLRSPYLLLKESGFFFGNIFFEYKNIVQINLADNNIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEHHEEEEEEEEEEEECCCCEE
VIDLKSGRRLLVRIQEKEDIEKVVNFFGGYKQ
EEEECCCCEEEEEECCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TNFILLVGIIAVILFAIYDQSIMPKLKGETKLAVRLQKQVKADAWILIGLIILPIIYGI
CHHHHHHHHHHHHHHHHHCHHHCHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
QNGIEALTIYLLAFSIILCIYTAFLRSPYLLLKESGFFFGNIFFEYKNIVQINLADNNIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEHHEEEEEEEEEEEECCCCEE
VIDLKSGRRLLVRIQEKEDIEKVVNFFGGYKQ
EEEECCCCEEEEEECCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]