Click here to switch to the map view.

The map label for this gene is ptnC [H]

Identifier: 126208856

GI number: 126208856

Start: 1593350

End: 1594150

Strand: Direct

Name: ptnC [H]

Synonym: APL_1392

Alternate gene names: 126208856

Gene position: 1593350-1594150 (Clockwise)

Preceding gene: 126208855

Following gene: 126208857

Centisome position: 70.05

GC content: 47.69

Gene sequence:

>801_bases
ATGGAAATTTCAACTTTACAAGTCATTCTTGTCTTCCTCGTGTCCTGTATTTGCGGTGCGGGCTCTATTCTTGACGAATT
CCAAACGCATCGCCCGTTAATCGCTTGTACCTTAATCGGTTTGGTATTGGGTGATGTAAAAACCGGCGTTATCGTCGGCG
GTTCTCTGGAATTATTAGCCTTAGGCTGGATGAATATCGGTGCGGCATTAGCACCGGATGCGGCACTCGCGTCGGTTATC
TCAACCATCTTAGTCATTGTCGGCGGACAAGATATTGCAACCGGTATCGCCGTCGCCATTCCGTTAGCGGCAGCCGGTCA
AGTTTTAACGTATGTGGTTCGCGCCATTACCGTCGGTTTCCAACACGCCGCCGATAAGTCGGTATTAGACGGTAATCTTA
ATCGCTTAGACTGGATTCACTTCGGTGCATTAATGTTACAAGCGATGCGTATCGCTATCCCTGCGTTAATCGTTGCATTA
ACCGCCGGTACCGATGTCGTACAAACCATGTTAAATGCCATTCCGGAAGTCGTGACCACCGGTCTGAAAATTGCAGGCGG
ATTTATTGCGGTCGTCGGTTACGCCATGGTCATCAATATGATGCGCGCCGGTCATTTAATGCCGTTCTTCTATGCGGGAT
TCGTCATTGCGGCATTTACAGACTTCAACCTAGTTGCGCTCGGCGTACTCGGTACGATTATGGCCGTGCTTTATATTCAA
ATTCACCCTAAATATAACAAAAGCCAACAAGTCGTCGTTGCGGCAAACCAAGATAACGACCTTGATAACAGATTAGATTA
A

Upstream 100 bases:

>100_bases
TAAAGGCATTGAGCTGGATGTGCGTAAAGTGTCAAATGACGCTCGTCAGTATATGATGGATTTATTAAAGAAAAACAGCT
TAATCTAAAAGGAAACTAAA

Downstream 100 bases:

>100_bases
TGGAGAAAATAAAATGACAAACGAAATTAAAAAAGTAACGCAAAGCGATTTAAATGCAGTTGTTCTCCGTTCTAACCTGT
TCCAAGGTTCATGGAACTTT

Product: mannose permease IIC component

Products: protein histidine; sugar phosphate; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]

Alternate protein names: EII-P-Man; EIIC-Man; PTS system mannose-specific EIIC component [H]

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MEISTLQVILVFLVSCICGAGSILDEFQTHRPLIACTLIGLVLGDVKTGVIVGGSLELLALGWMNIGAALAPDAALASVI
STILVIVGGQDIATGIAVAIPLAAAGQVLTYVVRAITVGFQHAADKSVLDGNLNRLDWIHFGALMLQAMRIAIPALIVAL
TAGTDVVQTMLNAIPEVVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGTIMAVLYIQ
IHPKYNKSQQVVVAANQDNDLDNRLD

Sequences:

>Translated_266_residues
MEISTLQVILVFLVSCICGAGSILDEFQTHRPLIACTLIGLVLGDVKTGVIVGGSLELLALGWMNIGAALAPDAALASVI
STILVIVGGQDIATGIAVAIPLAAAGQVLTYVVRAITVGFQHAADKSVLDGNLNRLDWIHFGALMLQAMRIAIPALIVAL
TAGTDVVQTMLNAIPEVVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGTIMAVLYIQ
IHPKYNKSQQVVVAANQDNDLDNRLD
>Mature_266_residues
MEISTLQVILVFLVSCICGAGSILDEFQTHRPLIACTLIGLVLGDVKTGVIVGGSLELLALGWMNIGAALAPDAALASVI
STILVIVGGQDIATGIAVAIPLAAAGQVLTYVVRAITVGFQHAADKSVLDGNLNRLDWIHFGALMLQAMRIAIPALIVAL
TAGTDVVQTMLNAIPEVVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFYAGFVIAAFTDFNLVALGVLGTIMAVLYIQ
IHPKYNKSQQVVVAANQDNDLDNRLD

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1788121, Length=266, Percent_Identity=73.3082706766917, Blast_Score=358, Evalue=1e-100,
Organism=Escherichia coli, GI1789528, Length=268, Percent_Identity=27.6119402985075, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 27868; Mature: 27868

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure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ECCCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N p -phosphohistidine; sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]

Specific reaction: protein N p -phosphohistidine + sugar = protein histidine + sugar phosphate phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]

General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]