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The map label for this gene is ccmC [H]

Identifier: 126208834

GI number: 126208834

Start: 1567409

End: 1568140

Strand: Reverse

Name: ccmC [H]

Synonym: APL_1370

Alternate gene names: 126208834

Gene position: 1568140-1567409 (Counterclockwise)

Preceding gene: 126208835

Following gene: 126208833

Centisome position: 68.94

GC content: 43.58

Gene sequence:

>732_bases
ATGTGGAAATGGCTTCATCCCTATGCTAAATCGGAAACACAATATCGATTATTAGGGAAAATTCAACCGGTATTAGGTTG
GTTAAGTTTTATTATGTTAGCGGTTGCTTTTGTTTGGGGGCTTGGGTTTGCGCCTAAAGATTATCAGCAAGGCGATAGTT
ATCGTATTATCTTCATTCACGTGCCTGCGGCAATTTGGTCGATGGGTGTATACGGTTCTATGGCGGTTGCCGCATTAGTG
GCATTAGTATGGCAGATTCGCCAAGCCAATCTTGCGATGATTTCAATGGCACCGATCGGTTTAGTTTTCGCATTTATCTC
GCTTGCGACCGGTGCGATTTGGGGTAAACCGATGTGGGGAACTTGGTGGGTATGGGATGCTCGCTTAACTTCGGCTTTGG
TGTTGTTTTTCCTCTATATCGGGGTAATGGCGTTGTATTCGGCTTTCCAAGATAAACAAACCGGTGCGAAAGCGGCGGGC
GTATTAGCCGTCGTCGGGGTAATAAATCTCCCTATTATCCATTTCTCGGTAGAATGGTGGAATACGTTACACCAAGGTGC
GACTATTACTAAATTAGATAAGCCGTCTATGGCGGTGGAAATGTTAATTCCGTTATTGTTAGCGATTTTCGGTAGTTTAA
TTTTTACCGCATGGTTCAGCATTTGGCGTTATCGTATCGCGTTATTAAATAATGAACGTAAGCGTCCTTGGGCGAAAACA
TTAAGTAAATAA

Upstream 100 bases:

>100_bases
CTTTCTCACCTTTTGCAATAGCAGGCGCATTAAGAATAAGCCTTCAGTAAGTAATGAAAAGCGGTGAGATTTTTAATCTT
TTTTGTAATTTGGAGATGTT

Downstream 100 bases:

>100_bases
GGAGAAAAACTTATGCAATTTCAATTTGAATCCATTAGTGAGTTCTTCTCAATGGGCAATTACGGTTTTTACGTATGGCT
TTCCTATGCCGTATCGTTAC

Product: heme exporter protein C

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MWKWLHPYAKSETQYRLLGKIQPVLGWLSFIMLAVAFVWGLGFAPKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAALV
ALVWQIRQANLAMISMAPIGLVFAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDKQTGAKAAG
VLAVVGVINLPIIHFSVEWWNTLHQGATITKLDKPSMAVEMLIPLLLAIFGSLIFTAWFSIWRYRIALLNNERKRPWAKT
LSK

Sequences:

>Translated_243_residues
MWKWLHPYAKSETQYRLLGKIQPVLGWLSFIMLAVAFVWGLGFAPKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAALV
ALVWQIRQANLAMISMAPIGLVFAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDKQTGAKAAG
VLAVVGVINLPIIHFSVEWWNTLHQGATITKLDKPSMAVEMLIPLLLAIFGSLIFTAWFSIWRYRIALLNNERKRPWAKT
LSK
>Mature_243_residues
MWKWLHPYAKSETQYRLLGKIQPVLGWLSFIMLAVAFVWGLGFAPKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAALV
ALVWQIRQANLAMISMAPIGLVFAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDKQTGAKAAG
VLAVVGVINLPIIHFSVEWWNTLHQGATITKLDKPSMAVEMLIPLLLAIFGSLIFTAWFSIWRYRIALLNNERKRPWAKT
LSK

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=241, Percent_Identity=57.2614107883817, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27426; Mature: 27426

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKWLHPYAKSETQYRLLGKIQPVLGWLSFIMLAVAFVWGLGFAPKDYQQGDSYRIIFIH
CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE
VPAAIWSMGVYGSMAVAALVALVWQIRQANLAMISMAPIGLVFAFISLATGAIWGKPMWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TWWVWDARLTSALVLFFLYIGVMALYSAFQDKQTGAKAAGVLAVVGVINLPIIHFSVEWW
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEEHHHH
NTLHQGATITKLDKPSMAVEMLIPLLLAIFGSLIFTAWFSIWRYRIALLNNERKRPWAKT
HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LSK
CCC
>Mature Secondary Structure
MWKWLHPYAKSETQYRLLGKIQPVLGWLSFIMLAVAFVWGLGFAPKDYQQGDSYRIIFIH
CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE
VPAAIWSMGVYGSMAVAALVALVWQIRQANLAMISMAPIGLVFAFISLATGAIWGKPMWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TWWVWDARLTSALVLFFLYIGVMALYSAFQDKQTGAKAAGVLAVVGVINLPIIHFSVEWW
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEEHHHH
NTLHQGATITKLDKPSMAVEMLIPLLLAIFGSLIFTAWFSIWRYRIALLNNERKRPWAKT
HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LSK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]