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The map label for this gene is yraN [C]

Identifier: 126208827

GI number: 126208827

Start: 1560504

End: 1560875

Strand: Direct

Name: yraN [C]

Synonym: APL_1363

Alternate gene names: 126208827

Gene position: 1560504-1560875 (Clockwise)

Preceding gene: 126208826

Following gene: 126208828

Centisome position: 68.61

GC content: 42.74

Gene sequence:

>372_bases
ATGGTGCAGTGGAAAACGCTAACTAAACGTTCGCAAGGTGCGAATTTTGAACAAAAAGCCCGTGAATTTTTAGAACGAAA
CGGGCTTAAGTTTATTGCGGCAAATCAGCAATTCAAATGCGGCGAATTGGATTTGATTATGCGCCAAGGCGATACCTTCG
TTTTTGTAGAAGTTCGCCAACGTAAAAGTAATCGATTCGGTTCCGCAGTCGAAAGTATAGATTATCGGAAGCAACAAAAA
TGGCTGGATGCCGCCAATATGTGGCTGTTTACGCGACATAAGCAAAGTTTGGATACCGCAAATTGCCGCTTTGATGTTGT
CGCCTTTGAAGGAAATGATCCGCCTCTTTGGATCCCAAATTTTTTAGGATAG

Upstream 100 bases:

>100_bases
CGCCAAATTCCGGGTTATAGCGTTTCAGGTTTAACCGGTAATTTAACCGCCAGCCCTAACTGTAATATCGAACGCGGAAT
GTCTTGGTTGCAATATCGTA

Downstream 100 bases:

>100_bases
TTCTTTTCATGCTCGAAAAAATTCAAGATCGTTTTACCGAAAGTATCCAGATCCAAATAGCGGCGGCCGAATTACTCCCC
AAAACCTTGAGTGAAGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MVQWKTLTKRSQGANFEQKAREFLERNGLKFIAANQQFKCGELDLIMRQGDTFVFVEVRQRKSNRFGSAVESIDYRKQQK
WLDAANMWLFTRHKQSLDTANCRFDVVAFEGNDPPLWIPNFLG

Sequences:

>Translated_123_residues
MVQWKTLTKRSQGANFEQKAREFLERNGLKFIAANQQFKCGELDLIMRQGDTFVFVEVRQRKSNRFGSAVESIDYRKQQK
WLDAANMWLFTRHKQSLDTANCRFDVVAFEGNDPPLWIPNFLG
>Mature_123_residues
MVQWKTLTKRSQGANFEQKAREFLERNGLKFIAANQQFKCGELDLIMRQGDTFVFVEVRQRKSNRFGSAVESIDYRKQQK
WLDAANMWLFTRHKQSLDTANCRFDVVAFEGNDPPLWIPNFLG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=116, Percent_Identity=50, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1363_ACTP2 (A3N211)

Other databases:

- EMBL:   CP000569
- RefSeq:   YP_001054052.1
- STRING:   A3N211
- GeneID:   4850163
- GenomeReviews:   CP000569_GR
- KEGG:   apl:APL_1363
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   EVRQRKN
- PhylomeDB:   A3N211
- ProtClustDB:   PRK12497
- BioCyc:   APLE416269:APL_1363-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14451; Mature: 14451

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQWKTLTKRSQGANFEQKAREFLERNGLKFIAANQQFKCGELDLIMRQGDTFVFVEVRQ
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCEEEEEEEEC
RKSNRFGSAVESIDYRKQQKWLDAANMWLFTRHKQSLDTANCRFDVVAFEGNDPPLWIPN
CCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCEEEEEEEECCCCCEECCC
FLG
CCC
>Mature Secondary Structure
MVQWKTLTKRSQGANFEQKAREFLERNGLKFIAANQQFKCGELDLIMRQGDTFVFVEVRQ
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCEEEEEEEEC
RKSNRFGSAVESIDYRKQQKWLDAANMWLFTRHKQSLDTANCRFDVVAFEGNDPPLWIPN
CCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCEEEEEEEECCCCCEECCC
FLG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA