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The map label for this gene is hslR [H]

Identifier: 126208778

GI number: 126208778

Start: 1505239

End: 1505643

Strand: Direct

Name: hslR [H]

Synonym: APL_1314

Alternate gene names: 126208778

Gene position: 1505239-1505643 (Clockwise)

Preceding gene: 126208770

Following gene: 126208779

Centisome position: 66.18

GC content: 46.42

Gene sequence:

>405_bases
ATGAAAAATACAGCGGAACGAGATAATGAAGTTCGCCTTGATAAATGGCTGTGGGCGGCTCGTTTTTACAAAACGCGTTC
GATCGCCAAAGCAATGATTGAAGGCGGTAAAGTGCATTATAACGGGCAAAGAGCGAAAACCAGCAAAACGGTCGAAATCG
GCGCAACTATCAAGCTACGCCAAGGTAACGATGAAAAAGAGATCATCGTCACGGCACTCAGCGACCAACGTCGAGGCGCA
CCGGAAGCGCAATTGCTTTACCAAGAAACCGAAAAAAGCATTAAACAACGTGAAGCGATTGCCTTTGCTCGTAAAGCGAA
TGCGCTTTCGATGCCGCATCCGGATCGCCGCCCGAATAAAAAGGAACGCCGTGATTTGGTAAAATTTAGAGATCAAATAT
TGTAA

Upstream 100 bases:

>100_bases
TATTTTATGATAAAATTTATTTAAATTTATGCAGTAAATTCCGTATAAATAAAATCATTTACGTTCAAATTGATCTAAGT
ATCTTAATTAGGTGTTTTTC

Downstream 100 bases:

>100_bases
TTTATCAATTCGCCCCTATATTGAACTCGATTTGACGGCACACAGTTTACGGTGTGCCTTCTTTTATTTTAACAAGCGGT
CAAATTTGTACATTTTTTTG

Product: heat shock-like protein 15

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKNTAERDNEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYNGQRAKTSKTVEIGATIKLRQGNDEKEIIVTALSDQRRGA
PEAQLLYQETEKSIKQREAIAFARKANALSMPHPDRRPNKKERRDLVKFRDQIL

Sequences:

>Translated_134_residues
MKNTAERDNEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYNGQRAKTSKTVEIGATIKLRQGNDEKEIIVTALSDQRRGA
PEAQLLYQETEKSIKQREAIAFARKANALSMPHPDRRPNKKERRDLVKFRDQIL
>Mature_134_residues
MKNTAERDNEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYNGQRAKTSKTVEIGATIKLRQGNDEKEIIVTALSDQRRGA
PEAQLLYQETEKSIKQREAIAFARKANALSMPHPDRRPNKKERRDLVKFRDQIL

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=121, Percent_Identity=70.2479338842975, Blast_Score=188, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15535; Mature: 15535

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTAERDNEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYNGQRAKTSKTVEIGATIKLR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCEEEEE
QGNDEKEIIVTALSDQRRGAPEAQLLYQETEKSIKQREAIAFARKANALSMPHPDRRPNK
CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
KERRDLVKFRDQIL
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKNTAERDNEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYNGQRAKTSKTVEIGATIKLR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCEEEEE
QGNDEKEIIVTALSDQRRGAPEAQLLYQETEKSIKQREAIAFARKANALSMPHPDRRPNK
CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
KERRDLVKFRDQIL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]