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The map label for this gene is yrbE [C]

Identifier: 126208757

GI number: 126208757

Start: 1480329

End: 1481033

Strand: Reverse

Name: yrbE [C]

Synonym: APL_1291

Alternate gene names: 126208757

Gene position: 1481033-1480329 (Counterclockwise)

Preceding gene: 126208758

Following gene: 126208756

Centisome position: 65.12

GC content: 44.68

Gene sequence:

>705_bases
ATGTTGCTTGGCGCACTTATCGGTAAACCGCAATTTCGTAAACATACGCCGCTATTAATTAAACAATTATATGTTTTAGG
TGTACAATCCTTACTGATTATTATGCTTTCCGGGTTGTTTATCGGGATGGTACTCGGCTTGCAGGGGTATGTAGTACTAG
TAGATTTCGCAGCGGAAACGAGCTTAGGTACTTTGGTTTCTCTTTCGCTTTTAAGAGAACTTGGTCCGGTTGTAACCGCG
TTATTATTTGCCGGTCGAGCCGGTTCCGCACTAACTGCCGAAATCGGTTTAATGAAGGCGACCGAACAGCTTTCCAGCCT
TGAAATGATGGCGGTTGATCCGTTAAGACGCATTATTGCGCCGCGTTTTTGGGCGGGCGTGATTTCCATGCCGATTTTAG
CCGCAATTTTTACCGCTATCGGTATTTGGGGCGGTTCGTTAGTCGGGGTTGATTGGAAAGGTGTTGATGGCGGCAGTTTT
TGGTCGGTAATGCAAAATTCCGTAGATTGGAGCGATCTGATTAACGGTTTTATCAAAAGTATTATTTTTGCGTTTGCGGT
CGTCTGGATAGCGTTATTTAACGGTTATGATTCCGTAGCGACTTCAGAGGGAATTAGCCAAGCAACGACCAGAACGGTAG
TACACGCTTCATTAGTCGTACTCGGATTGGATTTTATTTTAACCGCAATTATGTTCGGCGGTTAA

Upstream 100 bases:

>100_bases
GCTAAGGATTATACCGAGGAGCTATTTAGTGATTAATTTTATTAGTGGCATCGGTTCCACTGTTATCGACTTTATCCGAG
CTTTTGGGCGAGCGACTTTT

Downstream 100 bases:

>100_bases
TTCACAAAGGAAAAGATAATGCGTCAATCAATTAAATATGAATTTTGGGTAGGTCTATTTGTATTATTCGGCTTAGCCGC
ATTAGTATTCTTAGGCTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTA
LLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSF
WSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFGG

Sequences:

>Translated_234_residues
MLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTA
LLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSF
WSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFGG
>Mature_234_residues
MLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAETSLGTLVSLSLLRELGPVVTA
LLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSF
WSVMQNSVDWSDLINGFIKSIIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFGG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=235, Percent_Identity=74.8936170212766, Blast_Score=366, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 24905; Mature: 24905

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAET
CCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHH
SLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKS
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
IIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFGG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLGALIGKPQFRKHTPLLIKQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAET
CCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHH
SLGTLVSLSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PRFWAGVISMPILAAIFTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVDWSDLINGFIKS
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH
IIFAFAVVWIALFNGYDSVATSEGISQATTRTVVHASLVVLGLDFILTAIMFGG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]