| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is pstC [H]
Identifier: 126208726
GI number: 126208726
Start: 1449324
End: 1450277
Strand: Reverse
Name: pstC [H]
Synonym: APL_1260
Alternate gene names: 126208726
Gene position: 1450277-1449324 (Counterclockwise)
Preceding gene: 126208727
Following gene: 126208725
Centisome position: 63.76
GC content: 42.45
Gene sequence:
>954_bases ATGCCTAATACACAGAAACCAAGCTGTTTAAATCATCCTTTCGTAGAGGGTTTGTTTAAACATACGACACAATTTTTTGC TTGGCTTGTCTTTGCGATGTTGGCAGCCATTTTGATTTCATTAGTTATTGGCAGCTGGGATTCATTAACACGCTTTGGTC TAAGTTTCTTATGGACCAACGATTGGGATCCGATTAATGAGAATTTCGGTGTGCTGGTACCGGTTATCGGTACTTTGATT TCTGCGTTAATCGCGTTATTGATTGCGGTACCGATTTCTTTTGGAATTGCGGTTTTTTTAACGGAACTTGCACCGGAATG GTTGAAACGTCCGATTGGCGTAGCGGTAGAAATGTTGGCTGCGATTCCTTCGATTATCTACGGTATGTGGGGTTTATTTG TTTTCGTACCGCTGTTCCAAGAATATATTCAACCGACTTTAATTGAGGTACTTGGCGACCTACCGCTTATCGGCGTGTTA TTTTCCGGCGCACCTTTCGGTATCGGTTTATTTACCGCCGGGTTGGTGTTAGCGATTATGATCATTCCTTATATCGCCTC GATGATGCGAGAAGTGTTCGGTGTGGTACCGCCGATGTTGAAAGAAAGTGCTTACGGCTTAGGTTCAACCACTTGGGAAG TAGTTTGGAAAATCGTATTACCTTATACCAAAGCCGGTGTGGTCGGCAGTATGATGTTAGGACTCGGACATGCATTGGGT GAAACGATGGCGGTCACTTTCGTAATCGGTAACGCATTTAACTTACCTGAATCGCTCTTCTCGCCGTCCGCTTCAATTGC TTCATCAATTGCGAATGAATTTAATGAGGCGACCGGATTACAAAAATCGGCGTTGATGGAATTAGGTTTAATCTTATTCT TAATTACTATGGCCGTACTCAGTATTTCTCGCTTAATGATTTTAAGAATGACCCAAAAAGAAGGAAAGAAATAA
Upstream 100 bases:
>100_bases TAGATTCAACCGCTTTTCTTTTTATATGACAGCGGTGTCATAAAACTGTCATACTCTTTTTTTAAAATAAGCACCAAGAT AAAAACATTGGAGTTTTTTT
Downstream 100 bases:
>100_bases TGTATCGTAATAAAAACGGGCGTTTTTACCGCCGTAAATGTGTAAACAAAGTTATGCTCTCGGGTTCTTTCTTTGCGGTC GGGTTCGGGCTGTTTTGGCT
Product: phosphate transport system permease protein PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MPNTQKPSCLNHPFVEGLFKHTTQFFAWLVFAMLAAILISLVIGSWDSLTRFGLSFLWTNDWDPINENFGVLVPVIGTLI SALIALLIAVPISFGIAVFLTELAPEWLKRPIGVAVEMLAAIPSIIYGMWGLFVFVPLFQEYIQPTLIEVLGDLPLIGVL FSGAPFGIGLFTAGLVLAIMIIPYIASMMREVFGVVPPMLKESAYGLGSTTWEVVWKIVLPYTKAGVVGSMMLGLGHALG ETMAVTFVIGNAFNLPESLFSPSASIASSIANEFNEATGLQKSALMELGLILFLITMAVLSISRLMILRMTQKEGKK
Sequences:
>Translated_317_residues MPNTQKPSCLNHPFVEGLFKHTTQFFAWLVFAMLAAILISLVIGSWDSLTRFGLSFLWTNDWDPINENFGVLVPVIGTLI SALIALLIAVPISFGIAVFLTELAPEWLKRPIGVAVEMLAAIPSIIYGMWGLFVFVPLFQEYIQPTLIEVLGDLPLIGVL FSGAPFGIGLFTAGLVLAIMIIPYIASMMREVFGVVPPMLKESAYGLGSTTWEVVWKIVLPYTKAGVVGSMMLGLGHALG ETMAVTFVIGNAFNLPESLFSPSASIASSIANEFNEATGLQKSALMELGLILFLITMAVLSISRLMILRMTQKEGKK >Mature_316_residues PNTQKPSCLNHPFVEGLFKHTTQFFAWLVFAMLAAILISLVIGSWDSLTRFGLSFLWTNDWDPINENFGVLVPVIGTLIS ALIALLIAVPISFGIAVFLTELAPEWLKRPIGVAVEMLAAIPSIIYGMWGLFVFVPLFQEYIQPTLIEVLGDLPLIGVLF SGAPFGIGLFTAGLVLAIMIIPYIASMMREVFGVVPPMLKESAYGLGSTTWEVVWKIVLPYTKAGVVGSMMLGLGHALGE TMAVTFVIGNAFNLPESLFSPSASIASSIANEFNEATGLQKSALMELGLILFLITMAVLSISRLMILRMTQKEGKK
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=316, Percent_Identity=58.5443037974684, Blast_Score=369, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34433; Mature: 34301
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTQKPSCLNHPFVEGLFKHTTQFFAWLVFAMLAAILISLVIGSWDSLTRFGLSFLWTN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC DWDPINENFGVLVPVIGTLISALIALLIAVPISFGIAVFLTELAPEWLKRPIGVAVEMLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPSIIYGMWGLFVFVPLFQEYIQPTLIEVLGDLPLIGVLFSGAPFGIGLFTAGLVLAIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH IIPYIASMMREVFGVVPPMLKESAYGLGSTTWEVVWKIVLPYTKAGVVGSMMLGLGHALG HHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETMAVTFVIGNAFNLPESLFSPSASIASSIANEFNEATGLQKSALMELGLILFLITMAVL HHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SISRLMILRMTQKEGKK HHHHHHHHHHHHHCCCC >Mature Secondary Structure PNTQKPSCLNHPFVEGLFKHTTQFFAWLVFAMLAAILISLVIGSWDSLTRFGLSFLWTN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC DWDPINENFGVLVPVIGTLISALIALLIAVPISFGIAVFLTELAPEWLKRPIGVAVEMLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPSIIYGMWGLFVFVPLFQEYIQPTLIEVLGDLPLIGVLFSGAPFGIGLFTAGLVLAIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH IIPYIASMMREVFGVVPPMLKESAYGLGSTTWEVVWKIVLPYTKAGVVGSMMLGLGHALG HHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETMAVTFVIGNAFNLPESLFSPSASIASSIANEFNEATGLQKSALMELGLILFLITMAVL HHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SISRLMILRMTQKEGKK HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]