| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is pstS [H]
Identifier: 126208727
GI number: 126208727
Start: 1450428
End: 1451471
Strand: Reverse
Name: pstS [H]
Synonym: APL_1261
Alternate gene names: 126208727
Gene position: 1451471-1450428 (Counterclockwise)
Preceding gene: 126208728
Following gene: 126208726
Centisome position: 63.82
GC content: 42.82
Gene sequence:
>1044_bases ATGTTATTGGTAAAAACAGCTAAAAAATTCGTTGTTATCGGACTTTCATTAGGCGTAATGGCATCAAGTTATGCTGAAAC GATTACCGGTGCAGGCGCTTCATTCCCCTATCCGATTTATGCGAAATGGGCTTCACTTTATGAAAAAGAAACGGGTAATA AAGTGAATTATCAATCTATCGGTTCCGGCGGAGGTCAGCAACAAATTATCGCAAAAACGATTGATTTCGGTGCGTCGGAC GATCCGATGAAAGCGGAATTATTGGATCAACACAAATTATTACAATTCCCGGCAATTATCGGCGGTACGGTACCGGTGGT GAACTTACCGGAATTTAAAGCGGGTGAATTAAAATTATCCGGTACGGTATTGGCGGATATTTTCCTCGGTAAAATTACTA AATGGAATGACCCGGCGATTAAAGCGTTAAACGCATCGTTAAATTTACCGGATAAAAGTATTGTCGTTGTACGTCGTTCG GACGGTTCGGGTACAACATTCGGTTGGACTAACTATTTATCGAAAGTGTCGCTGGAATGGAAAGAAAAAGTCGGTGAAGG TAAATCGGTTAAATGGCCTACCGGTCAAGGCGGTAAAGGTAATGAAGGCGTAGCCGCTTATGTGAAACAACTTAAATATT CCATCGGTTATGTCGAATATGCTTATGCGAAACAAAATAACTTAGCTTGGGCTTCGTTACAAAACCAAGCGGGTAAATTT GTACAACCGTCACGCGAAAGTTTTATGGCGGCGGCTGCAAATGCGCAGTGGGATAAAGCGAAAGGTATGGGCATTATGCT TACCAATGAAAGCGGCGATAATTCATGGCCTGTGACGGCGGCAAGTTTCATCCTTGTTCACCAACAGGCGGATAATCCGA CCGCAACCAAAGCGGTGTTTGACTTCTTCGATTGGGCTTTTGAAAAAGGTAAAAATGCGGCGTCGGAGTTAGATTATGTG CCGTTACCGGATGAAGTCGTAACGAAAATCAAACAAAAATGGCAAAACGAAGTAAAAGATAAAGACGGTAAAGCGGTTCG CTAA
Upstream 100 bases:
>100_bases TTTAAATTGTCATCAAATCGTCATATTGTTTTTTTAGAATGCGCGTAAACCAAATAATCTATTCCGAACAGCTAGTTCAA ACATCAATGAGGAGAGCAAT
Downstream 100 bases:
>100_bases TCGTTAAACAATAAGTAAGCGGTTGAATTTTAAAAGTTTTTTGCAAACTTTAGATTCAACCGCTTTTCTTTTTATATGAC AGCGGTGTCATAAAACTGTC
Product: phosphate-binding periplasmic protein precursor
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MLLVKTAKKFVVIGLSLGVMASSYAETITGAGASFPYPIYAKWASLYEKETGNKVNYQSIGSGGGQQQIIAKTIDFGASD DPMKAELLDQHKLLQFPAIIGGTVPVVNLPEFKAGELKLSGTVLADIFLGKITKWNDPAIKALNASLNLPDKSIVVVRRS DGSGTTFGWTNYLSKVSLEWKEKVGEGKSVKWPTGQGGKGNEGVAAYVKQLKYSIGYVEYAYAKQNNLAWASLQNQAGKF VQPSRESFMAAAANAQWDKAKGMGIMLTNESGDNSWPVTAASFILVHQQADNPTATKAVFDFFDWAFEKGKNAASELDYV PLPDEVVTKIKQKWQNEVKDKDGKAVR
Sequences:
>Translated_347_residues MLLVKTAKKFVVIGLSLGVMASSYAETITGAGASFPYPIYAKWASLYEKETGNKVNYQSIGSGGGQQQIIAKTIDFGASD DPMKAELLDQHKLLQFPAIIGGTVPVVNLPEFKAGELKLSGTVLADIFLGKITKWNDPAIKALNASLNLPDKSIVVVRRS DGSGTTFGWTNYLSKVSLEWKEKVGEGKSVKWPTGQGGKGNEGVAAYVKQLKYSIGYVEYAYAKQNNLAWASLQNQAGKF VQPSRESFMAAAANAQWDKAKGMGIMLTNESGDNSWPVTAASFILVHQQADNPTATKAVFDFFDWAFEKGKNAASELDYV PLPDEVVTKIKQKWQNEVKDKDGKAVR >Mature_347_residues MLLVKTAKKFVVIGLSLGVMASSYAETITGAGASFPYPIYAKWASLYEKETGNKVNYQSIGSGGGQQQIIAKTIDFGASD DPMKAELLDQHKLLQFPAIIGGTVPVVNLPEFKAGELKLSGTVLADIFLGKITKWNDPAIKALNASLNLPDKSIVVVRRS DGSGTTFGWTNYLSKVSLEWKEKVGEGKSVKWPTGQGGKGNEGVAAYVKQLKYSIGYVEYAYAKQNNLAWASLQNQAGKF VQPSRESFMAAAANAQWDKAKGMGIMLTNESGDNSWPVTAASFILVHQQADNPTATKAVFDFFDWAFEKGKNAASELDYV PLPDEVVTKIKQKWQNEVKDKDGKAVR
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=332, Percent_Identity=53.3132530120482, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37706; Mature: 37706
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVKTAKKFVVIGLSLGVMASSYAETITGAGASFPYPIYAKWASLYEKETGNKVNYQSI CEEEECCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECHHCC GSGGGQQQIIAKTIDFGASDDPMKAELLDQHKLLQFPAIIGGTVPVVNLPEFKAGELKLS CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEC GTVLADIFLGKITKWNDPAIKALNASLNLPDKSIVVVRRSDGSGTTFGWTNYLSKVSLEW CHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHH KEKVGEGKSVKWPTGQGGKGNEGVAAYVKQLKYSIGYVEYAYAKQNNLAWASLQNQAGKF HHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHCCCCC VQPSRESFMAAAANAQWDKAKGMGIMLTNESGDNSWPVTAASFILVHQQADNPTATKAVF CCCCHHHHHHHHCCCCCHHHCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHH DFFDWAFEKGKNAASELDYVPLPDEVVTKIKQKWQNEVKDKDGKAVR HHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLLVKTAKKFVVIGLSLGVMASSYAETITGAGASFPYPIYAKWASLYEKETGNKVNYQSI CEEEECCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECHHCC GSGGGQQQIIAKTIDFGASDDPMKAELLDQHKLLQFPAIIGGTVPVVNLPEFKAGELKLS CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEC GTVLADIFLGKITKWNDPAIKALNASLNLPDKSIVVVRRSDGSGTTFGWTNYLSKVSLEW CHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCHHH KEKVGEGKSVKWPTGQGGKGNEGVAAYVKQLKYSIGYVEYAYAKQNNLAWASLQNQAGKF HHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHCCCCC VQPSRESFMAAAANAQWDKAKGMGIMLTNESGDNSWPVTAASFILVHQQADNPTATKAVF CCCCHHHHHHHHCCCCCHHHCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHHHHH DFFDWAFEKGKNAASELDYVPLPDEVVTKIKQKWQNEVKDKDGKAVR HHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]