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The map label for this gene is yfbS [C]

Identifier: 126208718

GI number: 126208718

Start: 1438796

End: 1440184

Strand: Reverse

Name: yfbS [C]

Synonym: APL_1252

Alternate gene names: 126208718

Gene position: 1440184-1438796 (Counterclockwise)

Preceding gene: 126208719

Following gene: 126208717

Centisome position: 63.32

GC content: 42.12

Gene sequence:

>1389_bases
ATGTCAAAAACTACAAAGAGCCCTATGCGAGGCGTTATTATCTTGACGCTCGATTTAATTTTGTTTTTTCTCTTGTTGAA
ATGGTTACCTTTTTCTCCGCAAGAAAATAGAGGATTGGCATTGTTAATTTTTGTCGGCATACTTTGGCTGACGGAAGCAT
TTAATATTACGGTTACCTCTCTTATGGTACCTATCTTCGCCATCTTCCTGAACGTCTTGTCCACTAAAGCGGCTTTCGCA
CCTTTTTCCGAACCTATCATCTTTATGTTTTTTGGCGGCTTTGTTATTGCGGCCGTATTAAATATCCATCAAATCGATCT
TTGGATTGCCAACCACGTAATACGGTTAGCGAAAGGCAATTTAAAACGTACCATCATTTACTTATTTGCGGTAACCGCCG
GGCTTTCTCTTTTTATTAATAACACCGCAGTTGCCGCTTTGATGTTGCCGCTTTCGTTAGGAATCCTGCATCAATTGGAT
TTTAAGGAACATCGTAAAATCTACGTTTTCGTATTGCTTGGTATTGCGTTCAGTTCCAGTATCGGCGGGATGGGAACGGT
CGTCGGCTCGGCACCGAATGCGATTTTGGCTTCATATATTAAAGTATCTTTCTCAGAATGGCTCGCTTATGGGATGCCGG
TTGCAATTCTATTAATGATTTCAATGGTCATTGCATTACTTGCGGTACTTCGCCCGAATTTTAACGTACCGTTTGAAGCG
AAGGTGGAAAATATCCCATTAACGCCTAAACGTTTAACCACGCTAATTGTATTTTGTGTTACGGCGGTTTTACTGACTTT
CAGTAGTGCGATTGAACCGATTGTGCGCCAAGTCTTAGAACTAAAAGAATCGATTAAAAGTTTCGATGCGGTGATTGCTA
TGGTTGCTGTCGTGGTGCTTTGTATTACCAATACCGCGACATGGTCGCAAATTCAAGAACGTGCCGAATGGGGCGTATTA
ATGCTATTCGGCGGTGGTTTAACGCTAGGCATCGTCTTGAAAGATACCGGAGCAAGCAAAATTTTAGCTGACGGTATTGT
GAATTATATTGGTAACAAACACTGGTTAATTATGACATTATCAATGGCGGCATTTATTGTTTTCTTAACCGAATTTACCT
CTAATACGGCTAGTGCGGCGTTGATGATGCCGATTTTTATTTCCGTCGCCAATTCACTTGGCTTGCCGCCGATTTCATTG
GCGGCGATTATCGCTTGCGGTGCGTCTGCCGCTTTTATGTTGCCGATTGCTACGCCGCCGAATGCGATTGTGTTTGCAAC
AGGTTATATTAAGCAAAGCGAAATGGTTAAAGTCGGGCTGATTCTGAATTTATTATGTGTTGCGATTTTAGGCTGTATGT
CATATTTCTTCTGGACGACGTGGTGGTAA

Upstream 100 bases:

>100_bases
ATTGTTTCTGATATATACCCTATTTACTTTTGCAGAAAATCGGTTATTGTCGAATTTAGAGTCTAAAAAGACCGATATGC
AAACAATTAGAGGTGTTATT

Downstream 100 bases:

>100_bases
AAGCTCCATTTGGAGCGTTTGGGGCGGTTTAAGCGGTTCAAAATCGATGGTTTTTTGCAAAATTAAGCAAGAATTTGATC
TACATTCGCCCAAAATAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MSKTTKSPMRGVIILTLDLILFFLLLKWLPFSPQENRGLALLIFVGILWLTEAFNITVTSLMVPIFAIFLNVLSTKAAFA
PFSEPIIFMFFGGFVIAAVLNIHQIDLWIANHVIRLAKGNLKRTIIYLFAVTAGLSLFINNTAVAALMLPLSLGILHQLD
FKEHRKIYVFVLLGIAFSSSIGGMGTVVGSAPNAILASYIKVSFSEWLAYGMPVAILLMISMVIALLAVLRPNFNVPFEA
KVENIPLTPKRLTTLIVFCVTAVLLTFSSAIEPIVRQVLELKESIKSFDAVIAMVAVVVLCITNTATWSQIQERAEWGVL
MLFGGGLTLGIVLKDTGASKILADGIVNYIGNKHWLIMTLSMAAFIVFLTEFTSNTASAALMMPIFISVANSLGLPPISL
AAIIACGASAAFMLPIATPPNAIVFATGYIKQSEMVKVGLILNLLCVAILGCMSYFFWTTWW

Sequences:

>Translated_462_residues
MSKTTKSPMRGVIILTLDLILFFLLLKWLPFSPQENRGLALLIFVGILWLTEAFNITVTSLMVPIFAIFLNVLSTKAAFA
PFSEPIIFMFFGGFVIAAVLNIHQIDLWIANHVIRLAKGNLKRTIIYLFAVTAGLSLFINNTAVAALMLPLSLGILHQLD
FKEHRKIYVFVLLGIAFSSSIGGMGTVVGSAPNAILASYIKVSFSEWLAYGMPVAILLMISMVIALLAVLRPNFNVPFEA
KVENIPLTPKRLTTLIVFCVTAVLLTFSSAIEPIVRQVLELKESIKSFDAVIAMVAVVVLCITNTATWSQIQERAEWGVL
MLFGGGLTLGIVLKDTGASKILADGIVNYIGNKHWLIMTLSMAAFIVFLTEFTSNTASAALMMPIFISVANSLGLPPISL
AAIIACGASAAFMLPIATPPNAIVFATGYIKQSEMVKVGLILNLLCVAILGCMSYFFWTTWW
>Mature_461_residues
SKTTKSPMRGVIILTLDLILFFLLLKWLPFSPQENRGLALLIFVGILWLTEAFNITVTSLMVPIFAIFLNVLSTKAAFAP
FSEPIIFMFFGGFVIAAVLNIHQIDLWIANHVIRLAKGNLKRTIIYLFAVTAGLSLFINNTAVAALMLPLSLGILHQLDF
KEHRKIYVFVLLGIAFSSSIGGMGTVVGSAPNAILASYIKVSFSEWLAYGMPVAILLMISMVIALLAVLRPNFNVPFEAK
VENIPLTPKRLTTLIVFCVTAVLLTFSSAIEPIVRQVLELKESIKSFDAVIAMVAVVVLCITNTATWSQIQERAEWGVLM
LFGGGLTLGIVLKDTGASKILADGIVNYIGNKHWLIMTLSMAAFIVFLTEFTSNTASAALMMPIFISVANSLGLPPISLA
AIIACGASAAFMLPIATPPNAIVFATGYIKQSEMVKVGLILNLLCVAILGCMSYFFWTTWW

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. NADC subfamily [H]

Homologues:

Organism=Homo sapiens, GI31377715, Length=545, Percent_Identity=25.6880733944954, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI301069349, Length=492, Percent_Identity=24.5934959349593, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI29171306, Length=509, Percent_Identity=24.950884086444, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI58761541, Length=515, Percent_Identity=25.2427184466019, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI301069353, Length=351, Percent_Identity=28.2051282051282, Blast_Score=113, Evalue=5e-25,
Organism=Homo sapiens, GI19923838, Length=469, Percent_Identity=25.1599147121535, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI301069346, Length=144, Percent_Identity=35.4166666666667, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI4506979, Length=150, Percent_Identity=32.6666666666667, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI225637549, Length=150, Percent_Identity=32.6666666666667, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI225637552, Length=150, Percent_Identity=32.6666666666667, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI31795546, Length=145, Percent_Identity=33.1034482758621, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17551790, Length=516, Percent_Identity=23.4496124031008, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI32564681, Length=523, Percent_Identity=23.3269598470363, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI71988385, Length=482, Percent_Identity=24.4813278008299, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71989118, Length=510, Percent_Identity=24.3137254901961, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI32565804, Length=445, Percent_Identity=25.3932584269663, Blast_Score=112, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6324340, Length=420, Percent_Identity=25, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322263, Length=443, Percent_Identity=22.7990970654628, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6319885, Length=446, Percent_Identity=22.6457399103139, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI281362116, Length=501, Percent_Identity=24.750499001996, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI281362114, Length=501, Percent_Identity=24.5508982035928, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281362112, Length=501, Percent_Identity=24.5508982035928, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI78706796, Length=486, Percent_Identity=22.8395061728395, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI78706798, Length=486, Percent_Identity=22.8395061728395, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI45551633, Length=199, Percent_Identity=28.1407035175879, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281366409, Length=199, Percent_Identity=28.1407035175879, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17737623, Length=199, Percent_Identity=28.1407035175879, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24666468, Length=199, Percent_Identity=28.1407035175879, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 50308; Mature: 50177

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTTKSPMRGVIILTLDLILFFLLLKWLPFSPQENRGLALLIFVGILWLTEAFNITVTS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
LMVPIFAIFLNVLSTKAAFAPFSEPIIFMFFGGFVIAAVLNIHQIDLWIANHVIRLAKGN
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LKRTIIYLFAVTAGLSLFINNTAVAALMLPLSLGILHQLDFKEHRKIYVFVLLGIAFSSS
HHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCHHHCCEEEEHHHHHHHHHCC
IGGMGTVVGSAPNAILASYIKVSFSEWLAYGMPVAILLMISMVIALLAVLRPNFNVPFEA
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KVENIPLTPKRLTTLIVFCVTAVLLTFSSAIEPIVRQVLELKESIKSFDAVIAMVAVVVL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CITNTATWSQIQERAEWGVLMLFGGGLTLGIVLKDTGASKILADGIVNYIGNKHWLIMTL
HHCCCCHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEHHH
SMAAFIVFLTEFTSNTASAALMMPIFISVANSLGLPPISLAAIIACGASAAFMLPIATPP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCC
NAIVFATGYIKQSEMVKVGLILNLLCVAILGCMSYFFWTTWW
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKTTKSPMRGVIILTLDLILFFLLLKWLPFSPQENRGLALLIFVGILWLTEAFNITVTS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH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CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]