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The map label for this gene is yfbS [C]

Identifier: 126208719

GI number: 126208719

Start: 1440415

End: 1441689

Strand: Reverse

Name: yfbS [C]

Synonym: APL_1253

Alternate gene names: 126208719

Gene position: 1441689-1440415 (Counterclockwise)

Preceding gene: 126208720

Following gene: 126208718

Centisome position: 63.39

GC content: 45.25

Gene sequence:

>1275_bases
ATGACCCCGAGTGCAATTACACTCTGCTTTTTAGTATTTGCGATCGTGATGTTTGCCTTAGAGAAATTGCCTCTCGCGGT
GACCGCAATGATTGTCACCGTCGGTTTAGCGATTACCGGCGTATTACCTGCCAAAGACGCCTTTTTAGGCTTTGTCGATA
CTAATGTGATTTTGTTTGTTGCGATGTTTGTCATCGGCGGAGCATTATTTGAAACCGGTATGGCGAATAAAATCGGCGGA
GTGGTCAGCAAGTTTGCTAAAAGCGAACGCCAACTTATGGTGGTATTGATGGTGATCACCGGCTTAATGTCGGGCGTTCT
ATCAAATACGGGAACGGCGGCGATTTTAATTCCGGTCATTTTAGGTATTGCAACCAAATCGGGTTTTGCTCGTTCGAGAT
TATTAATGCCGATGGCATTCGCTTCGACATTAGGCGGAAATTTGTCGTTAATCGGTTCGCCGAATAATCTTGTCGTTCAA
GGCGTGTTAGCGCAAACCGGTCTGAAATTCGGTTTTTTTGAATATGCGAAAATCGGTTTACCTCTCTTAATCGTCGGTGT
TCTTTATTTTGTGTTTATCGGTTATCGCCTTTTACCTAAACAATTGAATACGCATGTGGAACAAGAGGAATACAATGCAT
TCCATAACCACCACAATCATATTCCGAGATGGAAGCAATGGGTTTCCTTTGTCGTCTTATTAGCGACGTCACTTGCGATG
GTATTTGAAGACGCTATCGGGATCAAACTGTATATTTCCGCTTGCGTCGGCGCATTAATTCTGGTCATTATGCGCGTGAT
TACCGATAGGCAGGCGTATCAGGCGATTGATAGCCAAGTAGTATTCCTTTTTGCCGGAACTTTGGCATTCGCTGACGCTT
TACAACGTACCGGCGCCGGTGCGGATATCGCGCATTCCATCTTAGGGTTATTGGGTGATCATCCGAGTGCCAACGCGCTT
CTGTTTACCATTTTGTTATTGAGTTGCTTATTGACTAACTTTATGTCTAATACGGCGACCGCCGCATTGCTCGCTCCGAT
AGGACTTTCGATTGCTAATTCGTTAGGGGCTGATCCGAGAGCGGTATTAATGGCGATTGTAGTCGGTTCTTCTTGTGCAT
TTGCAACGCCAATCGGTACGCCGGCGAATACGATGATTCTTTCCGTCGGTCATTACAGATTCGCTCATTATGCAAGAGCG
GGCGTACCGTTAATTGCGATTACTATCGCTGTAAGTATGGTGTTATTACCGATATTGTTCCCGTTCTTCTCTTAG

Upstream 100 bases:

>100_bases
ACGGGGATAACCTTTTCGGGTAGATTATAGCTTACTTTGGAATAAGAAATATGTATCGTATTCTAATTCGCTATATTCAA
AACTTATGATAGGAGCCTTT

Downstream 100 bases:

>100_bases
TGCGGTAACTCTAACAGATTAAATAAGCGGTTGAATTTTCATAAGAACTTGCAAGGTTTTTCGGAAATTTAACCGCTTTT
TCTTTCACTATATAAAGTTG

Product: putative sodium/sulphate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MTPSAITLCFLVFAIVMFALEKLPLAVTAMIVTVGLAITGVLPAKDAFLGFVDTNVILFVAMFVIGGALFETGMANKIGG
VVSKFAKSERQLMVVLMVITGLMSGVLSNTGTAAILIPVILGIATKSGFARSRLLMPMAFASTLGGNLSLIGSPNNLVVQ
GVLAQTGLKFGFFEYAKIGLPLLIVGVLYFVFIGYRLLPKQLNTHVEQEEYNAFHNHHNHIPRWKQWVSFVVLLATSLAM
VFEDAIGIKLYISACVGALILVIMRVITDRQAYQAIDSQVVFLFAGTLAFADALQRTGAGADIAHSILGLLGDHPSANAL
LFTILLLSCLLTNFMSNTATAALLAPIGLSIANSLGADPRAVLMAIVVGSSCAFATPIGTPANTMILSVGHYRFAHYARA
GVPLIAITIAVSMVLLPILFPFFS

Sequences:

>Translated_424_residues
MTPSAITLCFLVFAIVMFALEKLPLAVTAMIVTVGLAITGVLPAKDAFLGFVDTNVILFVAMFVIGGALFETGMANKIGG
VVSKFAKSERQLMVVLMVITGLMSGVLSNTGTAAILIPVILGIATKSGFARSRLLMPMAFASTLGGNLSLIGSPNNLVVQ
GVLAQTGLKFGFFEYAKIGLPLLIVGVLYFVFIGYRLLPKQLNTHVEQEEYNAFHNHHNHIPRWKQWVSFVVLLATSLAM
VFEDAIGIKLYISACVGALILVIMRVITDRQAYQAIDSQVVFLFAGTLAFADALQRTGAGADIAHSILGLLGDHPSANAL
LFTILLLSCLLTNFMSNTATAALLAPIGLSIANSLGADPRAVLMAIVVGSSCAFATPIGTPANTMILSVGHYRFAHYARA
GVPLIAITIAVSMVLLPILFPFFS
>Mature_423_residues
TPSAITLCFLVFAIVMFALEKLPLAVTAMIVTVGLAITGVLPAKDAFLGFVDTNVILFVAMFVIGGALFETGMANKIGGV
VSKFAKSERQLMVVLMVITGLMSGVLSNTGTAAILIPVILGIATKSGFARSRLLMPMAFASTLGGNLSLIGSPNNLVVQG
VLAQTGLKFGFFEYAKIGLPLLIVGVLYFVFIGYRLLPKQLNTHVEQEEYNAFHNHHNHIPRWKQWVSFVVLLATSLAMV
FEDAIGIKLYISACVGALILVIMRVITDRQAYQAIDSQVVFLFAGTLAFADALQRTGAGADIAHSILGLLGDHPSANALL
FTILLLSCLLTNFMSNTATAALLAPIGLSIANSLGADPRAVLMAIVVGSSCAFATPIGTPANTMILSVGHYRFAHYARAG
VPLIAITIAVSMVLLPILFPFFS

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. NADC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=220, Percent_Identity=35, Blast_Score=124, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71988385, Length=489, Percent_Identity=23.3128834355828, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71989118, Length=474, Percent_Identity=22.5738396624473, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI32565804, Length=477, Percent_Identity=23.4800838574423, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI19920704, Length=207, Percent_Identity=29.4685990338164, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28574683, Length=207, Percent_Identity=29.4685990338164, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28574681, Length=207, Percent_Identity=29.4685990338164, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28574685, Length=207, Percent_Identity=29.4685990338164, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28574678, Length=207, Percent_Identity=29.4685990338164, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24581759, Length=207, Percent_Identity=29.4685990338164, Blast_Score=76, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 44949; Mature: 44818

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCC
>Mature Secondary Structure 
TPSAITLCFLVFAIVMFALEKLPLAVTAMIVTVGLAITGVLPAKDAFLGFVDTNVILFV
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AMFVIGGALFETGMANKIGGVVSKFAKSERQLMVVLMVITGLMSGVLSNTGTAAILIPVI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LGIATKSGFARSRLLMPMAFASTLGGNLSLIGSPNNLVVQGVLAQTGLKFGFFEYAKIGL
HHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHEEHHHHHCCCHHHHHHHHHHCH
PLLIVGVLYFVFIGYRLLPKQLNTHVEQEEYNAFHNHHNHIPRWKQWVSFVVLLATSLAM
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VFEDAIGIKLYISACVGALILVIMRVITDRQAYQAIDSQVVFLFAGTLAFADALQRTGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADIAHSILGLLGDHPSANALLFTILLLSCLLTNFMSNTATAALLAPIGLSIANSLGADPR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AVLMAIVVGSSCAFATPIGTPANTMILSVGHYRFAHYARAGVPLIAITIAVSMVLLPILF
HHHHHHHHCCCCCCCCCCCCCCCHHEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
PFFS
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]