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The map label for this gene is ydcH [H]

Identifier: 126208636

GI number: 126208636

Start: 1345566

End: 1345781

Strand: Direct

Name: ydcH [H]

Synonym: APL_1168

Alternate gene names: 126208636

Gene position: 1345566-1345781 (Clockwise)

Preceding gene: 126208634

Following gene: 126208640

Centisome position: 59.16

GC content: 28.24

Gene sequence:

>216_bases
ATGTTCCCTGAATTTCGTGAATTAATTACTCAATTAAAAAATAGCGATACGCATTTTTCTCGTTTATTCGACAAACATAA
CGAGTTGGATCAACGGATTAAAAATATGGAATCAAATATCGAGCTTGCTACAAATGATGAAATAGAAGTTCTTAAAAGAG
AAAAATTACATATTAAAGATGAATTATATGCAATTCTTAAGAAAAAATCCGCATAG

Upstream 100 bases:

>100_bases
TCAGCTTCAAAAAATCAAAAGAAAATCAATGCCGAATAAATAAAAAGGAGTAGTATCAAACTAAACCAATTGATTAACTA
AGACATAATAGGAGTTGTAT

Downstream 100 bases:

>100_bases
TTTCATCAAGTTCAGTATAAACGCTTAGATAATATATAAAAAAATACCCAGCTAAAAAGCTGGGTATTTCAGTTAATCAT
TACGATTATTATTCAGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MFPEFRELITQLKNSDTHFSRLFDKHNELDQRIKNMESNIELATNDEIEVLKREKLHIKDELYAILKKKSA

Sequences:

>Translated_71_residues
MFPEFRELITQLKNSDTHFSRLFDKHNELDQRIKNMESNIELATNDEIEVLKREKLHIKDELYAILKKKSA
>Mature_71_residues
MFPEFRELITQLKNSDTHFSRLFDKHNELDQRIKNMESNIELATNDEIEVLKREKLHIKDELYAILKKKSA

Specific function: Unknown

COG id: COG2841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081906, Length=71, Percent_Identity=45.0704225352113, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007420 [H]

Pfam domain/function: PF04325 DUF465 [H]

EC number: NA

Molecular weight: Translated: 8545; Mature: 8545

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPEFRELITQLKNSDTHFSRLFDKHNELDQRIKNMESNIELATNDEIEVLKREKLHIKD
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ELYAILKKKSA
HHHHHHHHCCC
>Mature Secondary Structure
MFPEFRELITQLKNSDTHFSRLFDKHNELDQRIKNMESNIELATNDEIEVLKREKLHIKD
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ELYAILKKKSA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2671655; 9097039; 9278503; 7567469 [H]