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The map label for this gene is 126208601

Identifier: 126208601

GI number: 126208601

Start: 1307881

End: 1309230

Strand: Direct

Name: 126208601

Synonym: APL_1131

Alternate gene names: NA

Gene position: 1307881-1309230 (Clockwise)

Preceding gene: 126208600

Following gene: 126208602

Centisome position: 57.5

GC content: 39.93

Gene sequence:

>1350_bases
ATGTTTATTCAAAAAATTTATATAACTAAATCGCCTTTTCTTTCCTCTCCTCTACAATTTTTAAGTATAATAACTCGTCA
TTCTTTTTATATGGAACATGCTATGTTAGCGCGAGTTAAATCTTATAATAACCAACTCTATTCAATCCTAATCGGTCTGT
TTTTTATTTTGGCGCTTCCTTTAAAAACCAGTTATAGCTTAATTCCGATTCTATTAGCTGTTTCAGGTATTGCGTTACTT
GTTCCCCATATTAAATCCCGTACTTTTAACTTAGATAAAGCGGATAAATGGCTGATTGCTTCGTTTGTCTTTTACTTTAC
GCTTTGTGTGATTTCATTCATGACACATAAAGGCAAATTCAGCGAGCTTGATCTACCGAGTCGAGCCGTTCTCACTCTGC
CGATTCTAGCCGTATTGTATAAAAAGCACATTCAACAAGTATGGATCCTATATGCTATTCTAGCCGGCGGTATTGTGGCG
GGAGTCGTCAGTATCATTCAAGTTTTCGGTTTTGATCTTGATAAGCCCTTTCCGAAAACGATGCATATTCAAGCCGGTGA
TATGGCAATGTCTTTAGCTATGTTCTCATTTTGCGCATTATTTTATTTCCATGCGCAGAAACAACGTCTATTGACTGTTA
CTTGTTTAATCTCCGGATTACTTGCGATGATTGCCAGTTTCCTAACGACCGCACGCGGTGCTTGGATCGGTGTTCCGGCT
GTGCTTGCGGCCATTTTCTTGTTAAACCGTAAGAACTTATCCAAATGGGTCGTTACCAGCGTACTTTTAATCACACTTTC
CGGCGGATTCTTTGCTAAAGAGACGATTTACCAGCGTTATCTTGAAGCGAAAAGCGATATTTCCGCTTATGTAGATCGTT
CAAATACCAGCACCTCCGTCGGCGCTCGTTTTGATATGTGGAAAAGTTCGCTACTGGGCATTCAAGAAAAACCGCTATTC
GGTTGGGGGTTAGAAGGCGTGAAAGAGATGCGTAAACAACATTTTGAGCAAGGAAAGATTTCCCAGTACGCATCCGGATT
TGCACATGCGCATAACCAATATTTACACGATACCGCAACCAGAGGCGTATTAGGATTAATTGCTTTATTAGCTATTTTAT
TTGTACCGCTTAGCTCGTTTTGGCGCAATGTGCGACAAGCCGCACCGAACTCGTTAGCTCACTTATGGGGCGTTCTCGGG
ATTACGCATATTTTATTAATGATGAGCTACTTTTTAACTCAAGCATTTTTATCGCATAATTCCGGCGTAATGTTTTATTT
TACCGTTACGCTTATTTTCCTAGGATTACAAAAAACCGCACAAAATCAACCGCTTGTAGGAACTCAATAA

Upstream 100 bases:

>100_bases
GTTATTGAATTTAAACACAAGATACATATAATTTTGCACAGTACTCATAGAAGTATGACTCCATAATAAATTTCACCCCT
CAGGAACGAGGGGTTTTTTT

Downstream 100 bases:

>100_bases
TGTTACGTATTTTCTATACCGTTATCAGTTACATTATCCAACCGTTTATTTTACTGATGATGTGGAAACGCGGTTATAAA
CAACCGGCTTATCGTCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MFIQKIYITKSPFLSSPLQFLSIITRHSFYMEHAMLARVKSYNNQLYSILIGLFFILALPLKTSYSLIPILLAVSGIALL
VPHIKSRTFNLDKADKWLIASFVFYFTLCVISFMTHKGKFSELDLPSRAVLTLPILAVLYKKHIQQVWILYAILAGGIVA
GVVSIIQVFGFDLDKPFPKTMHIQAGDMAMSLAMFSFCALFYFHAQKQRLLTVTCLISGLLAMIASFLTTARGAWIGVPA
VLAAIFLLNRKNLSKWVVTSVLLITLSGGFFAKETIYQRYLEAKSDISAYVDRSNTSTSVGARFDMWKSSLLGIQEKPLF
GWGLEGVKEMRKQHFEQGKISQYASGFAHAHNQYLHDTATRGVLGLIALLAILFVPLSSFWRNVRQAAPNSLAHLWGVLG
ITHILLMMSYFLTQAFLSHNSGVMFYFTVTLIFLGLQKTAQNQPLVGTQ

Sequences:

>Translated_449_residues
MFIQKIYITKSPFLSSPLQFLSIITRHSFYMEHAMLARVKSYNNQLYSILIGLFFILALPLKTSYSLIPILLAVSGIALL
VPHIKSRTFNLDKADKWLIASFVFYFTLCVISFMTHKGKFSELDLPSRAVLTLPILAVLYKKHIQQVWILYAILAGGIVA
GVVSIIQVFGFDLDKPFPKTMHIQAGDMAMSLAMFSFCALFYFHAQKQRLLTVTCLISGLLAMIASFLTTARGAWIGVPA
VLAAIFLLNRKNLSKWVVTSVLLITLSGGFFAKETIYQRYLEAKSDISAYVDRSNTSTSVGARFDMWKSSLLGIQEKPLF
GWGLEGVKEMRKQHFEQGKISQYASGFAHAHNQYLHDTATRGVLGLIALLAILFVPLSSFWRNVRQAAPNSLAHLWGVLG
ITHILLMMSYFLTQAFLSHNSGVMFYFTVTLIFLGLQKTAQNQPLVGTQ
>Mature_449_residues
MFIQKIYITKSPFLSSPLQFLSIITRHSFYMEHAMLARVKSYNNQLYSILIGLFFILALPLKTSYSLIPILLAVSGIALL
VPHIKSRTFNLDKADKWLIASFVFYFTLCVISFMTHKGKFSELDLPSRAVLTLPILAVLYKKHIQQVWILYAILAGGIVA
GVVSIIQVFGFDLDKPFPKTMHIQAGDMAMSLAMFSFCALFYFHAQKQRLLTVTCLISGLLAMIASFLTTARGAWIGVPA
VLAAIFLLNRKNLSKWVVTSVLLITLSGGFFAKETIYQRYLEAKSDISAYVDRSNTSTSVGARFDMWKSSLLGIQEKPLF
GWGLEGVKEMRKQHFEQGKISQYASGFAHAHNQYLHDTATRGVLGLIALLAILFVPLSSFWRNVRQAAPNSLAHLWGVLG
ITHILLMMSYFLTQAFLSHNSGVMFYFTVTLIFLGLQKTAQNQPLVGTQ

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007016 [H]

Pfam domain/function: PF04932 Wzy_C [H]

EC number: NA

Molecular weight: Translated: 50295; Mature: 50295

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQKIYITKSPFLSSPLQFLSIITRHSFYMEHAMLARVKSYNNQLYSILIGLFFILALP
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKTSYSLIPILLAVSGIALLVPHIKSRTFNLDKADKWLIASFVFYFTLCVISFMTHKGKF
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SELDLPSRAVLTLPILAVLYKKHIQQVWILYAILAGGIVAGVVSIIQVFGFDLDKPFPKT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
MHIQAGDMAMSLAMFSFCALFYFHAQKQRLLTVTCLISGLLAMIASFLTTARGAWIGVPA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VLAAIFLLNRKNLSKWVVTSVLLITLSGGFFAKETIYQRYLEAKSDISAYVDRSNTSTSV
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GARFDMWKSSLLGIQEKPLFGWGLEGVKEMRKQHFEQGKISQYASGFAHAHNQYLHDTAT
CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RGVLGLIALLAILFVPLSSFWRNVRQAAPNSLAHLWGVLGITHILLMMSYFLTQAFLSHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGVMFYFTVTLIFLGLQKTAQNQPLVGTQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFIQKIYITKSPFLSSPLQFLSIITRHSFYMEHAMLARVKSYNNQLYSILIGLFFILALP
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKTSYSLIPILLAVSGIALLVPHIKSRTFNLDKADKWLIASFVFYFTLCVISFMTHKGKF
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SELDLPSRAVLTLPILAVLYKKHIQQVWILYAILAGGIVAGVVSIIQVFGFDLDKPFPKT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
MHIQAGDMAMSLAMFSFCALFYFHAQKQRLLTVTCLISGLLAMIASFLTTARGAWIGVPA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VLAAIFLLNRKNLSKWVVTSVLLITLSGGFFAKETIYQRYLEAKSDISAYVDRSNTSTSV
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GARFDMWKSSLLGIQEKPLFGWGLEGVKEMRKQHFEQGKISQYASGFAHAHNQYLHDTAT
CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RGVLGLIALLAILFVPLSSFWRNVRQAAPNSLAHLWGVLGITHILLMMSYFLTQAFLSHN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGVMFYFTVTLIFLGLQKTAQNQPLVGTQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]