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The map label for this gene is ygiW [C]

Identifier: 126208533

GI number: 126208533

Start: 1230590

End: 1231186

Strand: Direct

Name: ygiW [C]

Synonym: APL_1061

Alternate gene names: 126208533

Gene position: 1230590-1231186 (Clockwise)

Preceding gene: 126208532

Following gene: 126208534

Centisome position: 54.1

GC content: 43.05

Gene sequence:

>597_bases
ATGAAAAAATTTATGACAATGACTTCTATTCTTGCACTTTCTTCTATGGCTTTAACTTCCTTCGCTAATGCGGAAGAAAC
GACCGCACAAGCGCAAAATAACGTACAAACCGAAATGCCGGCAACTGCGGAAAAAGCGGTACCGGTTATCGGGCAACAAG
CGGTTGAATTTACGCGTAAAGCGGCGGATCAAATGATGCAAGGACAAGGTCGCGGACAGAACTTCCATTCGTTTCATCAC
AACGGCAAACATCCGTACGATATGATGAGAATGATGGCGTATCATCACCCGCATCAGTTCGGCGGCTATAAACCGCAAGG
TTTTATTGATCAAAATGCGGTGGCGAAAGATGCGAAAGCGGCGTTAGAAGCGAAAGATCGTTCGTTCGTTCAATTAGAAG
GTTCGATTTCAAAACAAGTAAACGATACCGAATACACTTTTGTCGATAGTACCGGTCAAATCAAAATTGAAGTGCCGCCA
AGCTTATGGCGCGGTTTATCGGTAGGTCCACAGGATAAAGTTCGTATTGACGGTATTTTAGATAAACAATGGGAACAACC
TGAAATTAAAGTGAAAAACATCACGAGATTGAAATAG

Upstream 100 bases:

>100_bases
CAAGGTCCGGCAAGCATTGATGTAGATCGCATTCAAAAACGTTAAGTTTTATCGCGCCGATATAAGGCAAACAATCACTC
ATTTAATTCGGGAGCTTAAT

Downstream 100 bases:

>100_bases
TTAAATCATATTATCTCTTTTAAAATCAGCATATTAAGGAATGCAATTTATTAAAAAAATCTTAGTATTAACCACCCTTG
CTACGGCAACTTTATTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKKFMTMTSILALSSMALTSFANAEETTAQAQNNVQTEMPATAEKAVPVIGQQAVEFTRKAADQMMQGQGRGQNFHSFHH
NGKHPYDMMRMMAYHHPHQFGGYKPQGFIDQNAVAKDAKAALEAKDRSFVQLEGSISKQVNDTEYTFVDSTGQIKIEVPP
SLWRGLSVGPQDKVRIDGILDKQWEQPEIKVKNITRLK

Sequences:

>Translated_198_residues
MKKFMTMTSILALSSMALTSFANAEETTAQAQNNVQTEMPATAEKAVPVIGQQAVEFTRKAADQMMQGQGRGQNFHSFHH
NGKHPYDMMRMMAYHHPHQFGGYKPQGFIDQNAVAKDAKAALEAKDRSFVQLEGSISKQVNDTEYTFVDSTGQIKIEVPP
SLWRGLSVGPQDKVRIDGILDKQWEQPEIKVKNITRLK
>Mature_198_residues
MKKFMTMTSILALSSMALTSFANAEETTAQAQNNVQTEMPATAEKAVPVIGQQAVEFTRKAADQMMQGQGRGQNFHSFHH
NGKHPYDMMRMMAYHHPHQFGGYKPQGFIDQNAVAKDAKAALEAKDRSFVQLEGSISKQVNDTEYTFVDSTGQIKIEVPP
SLWRGLSVGPQDKVRIDGILDKQWEQPEIKVKNITRLK

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiW [H]

Homologues:

Organism=Escherichia coli, GI1789401, Length=91, Percent_Identity=34.0659340659341, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 22183; Mature: 22183

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFMTMTSILALSSMALTSFANAEETTAQAQNNVQTEMPATAEKAVPVIGQQAVEFTRK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHH
AADQMMQGQGRGQNFHSFHHNGKHPYDMMRMMAYHHPHQFGGYKPQGFIDQNAVAKDAKA
HHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHH
ALEAKDRSFVQLEGSISKQVNDTEYTFVDSTGQIKIEVPPSLWRGLSVGPQDKVRIDGIL
HHHHCCCCEEEECCCHHCCCCCCEEEEECCCCEEEEEECHHHHCCCCCCCCCCEEECCCC
DKQWEQPEIKVKNITRLK
CCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MKKFMTMTSILALSSMALTSFANAEETTAQAQNNVQTEMPATAEKAVPVIGQQAVEFTRK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHH
AADQMMQGQGRGQNFHSFHHNGKHPYDMMRMMAYHHPHQFGGYKPQGFIDQNAVAKDAKA
HHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHH
ALEAKDRSFVQLEGSISKQVNDTEYTFVDSTGQIKIEVPPSLWRGLSVGPQDKVRIDGIL
HHHHCCCCEEEECCCHHCCCCCCEEEEECCCCEEEEEECHHHHCCCCCCCCCCEEECCCC
DKQWEQPEIKVKNITRLK
CCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]