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The map label for this gene is ygiW [C]

Identifier: 126208534

GI number: 126208534

Start: 1231227

End: 1231601

Strand: Direct

Name: ygiW [C]

Synonym: APL_1062

Alternate gene names: 126208534

Gene position: 1231227-1231601 (Clockwise)

Preceding gene: 126208533

Following gene: 126208535

Centisome position: 54.13

GC content: 40.8

Gene sequence:

>375_bases
ATGCAATTTATTAAAAAAATCTTAGTATTAACCACCCTTGCTACGGCAACTTTATTAGCGGCTTGCTCAACGAAAAACGA
AACGGTTCAGAATCAAACTTTCGGCGCGAACACGGCTAATACGGTTACTATCGCACAAGCGAAATCATTGCACGATGACA
GCCGTGTGGTATTACAAGGTAAAATCCAACGCCAAGTGGACGGTGACGAATACATTTTTGCCGACAGCACCGGCAATATT
AAAATCGAAATCGACGACCACGTATGGAAAGGTTTGGACGTCACGCCAAACGATACTATTCGTATCCAAGGTAAATTGGA
TAAAGAAACTTTCGACTCGTCTATTGATGTTTATAGCGTAGAAAAAGTACAATAA

Upstream 100 bases:

>100_bases
TTAGATAAACAATGGGAACAACCTGAAATTAAAGTGAAAAACATCACGAGATTGAAATAGTTAAATCATATTATCTCTTT
TAAAATCAGCATATTAAGGA

Downstream 100 bases:

>100_bases
TTCTTATTTATTAATCAGTTATACAAGCGGTCGATTTTTGCAAAATTTCAGCAAATTTAGACCGCTTGTCGCTTTATCGG
ACAATAATATGCGTATTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MQFIKKILVLTTLATATLLAACSTKNETVQNQTFGANTANTVTIAQAKSLHDDSRVVLQGKIQRQVDGDEYIFADSTGNI
KIEIDDHVWKGLDVTPNDTIRIQGKLDKETFDSSIDVYSVEKVQ

Sequences:

>Translated_124_residues
MQFIKKILVLTTLATATLLAACSTKNETVQNQTFGANTANTVTIAQAKSLHDDSRVVLQGKIQRQVDGDEYIFADSTGNI
KIEIDDHVWKGLDVTPNDTIRIQGKLDKETFDSSIDVYSVEKVQ
>Mature_124_residues
MQFIKKILVLTTLATATLLAACSTKNETVQNQTFGANTANTVTIAQAKSLHDDSRVVLQGKIQRQVDGDEYIFADSTGNI
KIEIDDHVWKGLDVTPNDTIRIQGKLDKETFDSSIDVYSVEKVQ

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiW [H]

Homologues:

Organism=Escherichia coli, GI1789401, Length=128, Percent_Identity=35.15625, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 13701; Mature: 13701

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFIKKILVLTTLATATLLAACSTKNETVQNQTFGANTANTVTIAQAKSLHDDSRVVLQG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEE
KIQRQVDGDEYIFADSTGNIKIEIDDHVWKGLDVTPNDTIRIQGKLDKETFDSSIDVYSV
EEEECCCCCEEEEECCCCCEEEEECCCEECCCCCCCCCEEEEEEEECCHHCCCCCCEEEE
EKVQ
EECC
>Mature Secondary Structure
MQFIKKILVLTTLATATLLAACSTKNETVQNQTFGANTANTVTIAQAKSLHDDSRVVLQG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEE
KIQRQVDGDEYIFADSTGNIKIEIDDHVWKGLDVTPNDTIRIQGKLDKETFDSSIDVYSV
EEEECCCCCEEEEECCCCCEEEEECCCEECCCCCCCCCEEEEEEEECCHHCCCCCCEEEE
EKVQ
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]