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The map label for this gene is ybjE [H]

Identifier: 126208515

GI number: 126208515

Start: 1209040

End: 1209948

Strand: Direct

Name: ybjE [H]

Synonym: APL_1041

Alternate gene names: 126208515

Gene position: 1209040-1209948 (Clockwise)

Preceding gene: 126208512

Following gene: 126208517

Centisome position: 53.16

GC content: 41.91

Gene sequence:

>909_bases
ATGTTATACGGTTTGGCAATTGTGCTAATCCCCCTGTTTTTGGGTTATTTGTTTAAAGTCGGCAAAGGCAAATTACAGAT
TGTTAATCAGGTCGTAAATATTTGCTTATATTTGATTTTATTTGTGATGGGGATCTCGCTCGGGCAATTAGACGATATTG
GCAGCAAGTTGCCGCAAATCGGTGGGATTGCGCTCGGTTTGAGCTTAATTATTCAATTGTTGAATATTATCGGTTTAGCG
ATTTACGATAAATGGCAACCGATGGTTCGTGAACAAGTGAATCCGCAAGAAATCCCATCTCGTTGGGTGATGTTATTCGA
TTCGTTTAAATTAATCGGTACCACTATCACCGGCGGATTAATCGGTTTTATCACAAAAGGTACGTTGGATTTCCCGCTAC
ACGCCAGTACCTATGTGTTGGAAGTAATGATTTTCGGCGTCGGGATTCAGTTGCGTAATAGTGGGATTCCGTTACGAGAA
GTCTTTTTTAACAAACGAGGCATTTATACTTCTTTAGTGATGATTGTCAGCAGTCTTATCGGCGGAGTTATTGCCGCTTT
GGCACTGGATTTAAGCATTATACAAGGACTTACTTTTGCTTCGGCATTCGGTTGGTATTCGTTATCCAGCGTATTAGTCA
ATGACGCTTGGGGGCCGATATACGGTAGTATCGCTTTCTTTAACGATCTTTCTCGTGAAATTTTCTGCTTATTTACCATT
CCGTTTTTTATGCGAGCGTTTCCCTCTACCGCAGTCGGACTAGGCGGGGCGACATCATTAGATTGTATGTTGCCGGTAAT
TCAAAAATCGGGTGGGACGCAAGTTGTGCCGCTGGCAATCAGTTTCGGCTTTATTGTGAATTTGGTTGCACCGTTATTAT
TAGCATTATTTATCGGCTTAGCCGGATAA

Upstream 100 bases:

>100_bases
TTGCTTATAAATAAAACCAACTGTATATAAAAACAGTTTCATTTTATGTGGTTACCGTTAAAATTTCAACCCAAAAATAA
ATAATGATAAGGAAGATGAA

Downstream 100 bases:

>100_bases
AACAAAATGGCAGGGTTATACCTGCCATTTTTTGTTTCTTAATCCACTTTTAGTAATTTGGCTAATGCCAACGACTTCCG
TTCAATTTCCTGCCATTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLYGLAIVLIPLFLGYLFKVGKGKLQIVNQVVNICLYLILFVMGISLGQLDDIGSKLPQIGGIALGLSLIIQLLNIIGLA
IYDKWQPMVREQVNPQEIPSRWVMLFDSFKLIGTTITGGLIGFITKGTLDFPLHASTYVLEVMIFGVGIQLRNSGIPLRE
VFFNKRGIYTSLVMIVSSLIGGVIAALALDLSIIQGLTFASAFGWYSLSSVLVNDAWGPIYGSIAFFNDLSREIFCLFTI
PFFMRAFPSTAVGLGGATSLDCMLPVIQKSGGTQVVPLAISFGFIVNLVAPLLLALFIGLAG

Sequences:

>Translated_302_residues
MLYGLAIVLIPLFLGYLFKVGKGKLQIVNQVVNICLYLILFVMGISLGQLDDIGSKLPQIGGIALGLSLIIQLLNIIGLA
IYDKWQPMVREQVNPQEIPSRWVMLFDSFKLIGTTITGGLIGFITKGTLDFPLHASTYVLEVMIFGVGIQLRNSGIPLRE
VFFNKRGIYTSLVMIVSSLIGGVIAALALDLSIIQGLTFASAFGWYSLSSVLVNDAWGPIYGSIAFFNDLSREIFCLFTI
PFFMRAFPSTAVGLGGATSLDCMLPVIQKSGGTQVVPLAISFGFIVNLVAPLLLALFIGLAG
>Mature_302_residues
MLYGLAIVLIPLFLGYLFKVGKGKLQIVNQVVNICLYLILFVMGISLGQLDDIGSKLPQIGGIALGLSLIIQLLNIIGLA
IYDKWQPMVREQVNPQEIPSRWVMLFDSFKLIGTTITGGLIGFITKGTLDFPLHASTYVLEVMIFGVGIQLRNSGIPLRE
VFFNKRGIYTSLVMIVSSLIGGVIAALALDLSIIQGLTFASAFGWYSLSSVLVNDAWGPIYGSIAFFNDLSREIFCLFTI
PFFMRAFPSTAVGLGGATSLDCMLPVIQKSGGTQVVPLAISFGFIVNLVAPLLLALFIGLAG

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=298, Percent_Identity=44.2953020134228, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 32591; Mature: 32591

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYGLAIVLIPLFLGYLFKVGKGKLQIVNQVVNICLYLILFVMGISLGQLDDIGSKLPQI
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHH
GGIALGLSLIIQLLNIIGLAIYDKWQPMVREQVNPQEIPSRWVMLFDSFKLIGTTITGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGFITKGTLDFPLHASTYVLEVMIFGVGIQLRNSGIPLREVFFNKRGIYTSLVMIVSSLI
HHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHH
GGVIAALALDLSIIQGLTFASAFGWYSLSSVLVNDAWGPIYGSIAFFNDLSREIFCLFTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PFFMRAFPSTAVGLGGATSLDCMLPVIQKSGGTQVVPLAISFGFIVNLVAPLLLALFIGL
HHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC
AG
CC
>Mature Secondary Structure
MLYGLAIVLIPLFLGYLFKVGKGKLQIVNQVVNICLYLILFVMGISLGQLDDIGSKLPQI
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHH
GGIALGLSLIIQLLNIIGLAIYDKWQPMVREQVNPQEIPSRWVMLFDSFKLIGTTITGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IGFITKGTLDFPLHASTYVLEVMIFGVGIQLRNSGIPLREVFFNKRGIYTSLVMIVSSLI
HHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHH
GGVIAALALDLSIIQGLTFASAFGWYSLSSVLVNDAWGPIYGSIAFFNDLSREIFCLFTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
PFFMRAFPSTAVGLGGATSLDCMLPVIQKSGGTQVVPLAISFGFIVNLVAPLLLALFIGL
HHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHC
AG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]