| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yihQ [C]
Identifier: 126208495
GI number: 126208495
Start: 1186618
End: 1188096
Strand: Direct
Name: yihQ [C]
Synonym: APL_1021
Alternate gene names: 126208495
Gene position: 1186618-1188096 (Clockwise)
Preceding gene: 126208491
Following gene: 126208496
Centisome position: 52.17
GC content: 36.85
Gene sequence:
>1479_bases TTGTTATCGGGTTATACTTCTATCGGTAATAAGCGATATGTGTTTAATTGGAACTACGATAAAGTTCCTGCTCCTAATGC GATGTCAGCTCATTTTCATCAGGCTGGTATGCATTTAGCTGCCAATATTAAACCTTGTTTATTACAAGATCACCCTCGTT ATGAAGAAGTAAAAAACTTAGGTCTATTTATCCAAGATTCTGAATTTAATCAACCGGAACGCTCGGTATTTTGGGATGAT GAAGGTTCTCATTTAGATTTTTCCAATCCGAAAACTATCGAATGGTGGAAACAAAATGTAACTAAGCAACTTCTGGAATA TGGTATTGATTCAACTTGGAACGATAATAATGAATATGAAGTTTGGGACGGTAATGCAAAATGTGTCGGTTTCGGTAAAG AAATTCCGATAAAACTTATTCGTCCGTTACAACCATTATTAATGATGAAATCTTCCTATGAAGCACAACGTGAATTTGCT CCTAATTTACGTCCTTATCTAATTTCTCGCTCAGGAAGTCCGGGTATGAATCGTTATGTACAAACTTGGTCGGGAGATAA TAGAACCAGCTGGAATACCTTACGTTACAACATTCGTATGGGACTTGGTATGAGCTTATCCGGTTTATATAACTTAGGTC ATGATGTCGGCGGCTTCTCTGGAAATAAGCCTGAACCGGAATTATTTGTTCGCTGGGTTCAAAATGGTGTCATGCACCCT CGTTTTACCATTCATTCTTGGAATGATGACAAAACCGTTAACGAGCCTTGGATGTATCCTGAAGTGACTCATATCATTAG AGATACGATTAAACTTCGTTATCGTTTAATGCCGTATCTCTATAATACTTTCTGGAAAGCTCATCATGCATTAGAGTCGA TGTTACGTCCGACTTTCTTGGATCATGAACACGATATCAATACTTTTGAAGAAAACGACGATTATCTTTTAGGTAAAGAT TTACTTGTTGCTTCTGTGGTAGAGCAAGATCAACGTAAACGTGAGGTTTATTTACCGAAAAATAATGCGGGCTGGTATGA TTTTTATGATCACACCTATCACCTCGACGGACAAACGATTACGACGGATGCGCCGCTTGAGAAAATCCCACTCTTTGTAA AAGCAGGTGCAATCATTCCGATGTCTGCAAGAGAAGCTTATGTAGATCCCCAAAAAGATACCTATAGAGAGCTTATGGTT TTCCCATTTATAAAAGCGGGGGAAGCGATAAATACTATTTACGATGATGACGGAGAAAGCTTCCGATATCAAAATAATGA GTATTTACAATTAATGGTAAAATTACGTTGTTCAGAAACAAATATCTATATTGATATTCATAAACAAGGTAATTGGATAC CGGCTTATAAAGAATTGAGAATAACGCTACCTGATAATGAAACAAGACAACTGGTCATAAACGGTAATGTCTTCACAAAA GGAGAGTTATTTTCATTAAATAATCCTAAAGAGAGTTAA
Upstream 100 bases:
>100_bases GTCAGGATAGAAAAACCGGCGCCTATTTATTTGGTACCGACGACAGTAAAAATTCGTAGATCTATGTGCTGAATATGATA TTCCATGTGATTCATTCCAA
Downstream 100 bases:
>100_bases AAAATGACAAGCAATGCAGATTTACGTTCATATAAAAAAATTGGTTCGATTTTAAAACAAGAATTAATTGACGGTATTTA CCAAGTTGGCGAACGACTGC
Product: alpha-glucosidase 2
Products: NA
Alternate protein names: Alpha-glucosidase II [H]
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MLSGYTSIGNKRYVFNWNYDKVPAPNAMSAHFHQAGMHLAANIKPCLLQDHPRYEEVKNLGLFIQDSEFNQPERSVFWDD EGSHLDFSNPKTIEWWKQNVTKQLLEYGIDSTWNDNNEYEVWDGNAKCVGFGKEIPIKLIRPLQPLLMMKSSYEAQREFA PNLRPYLISRSGSPGMNRYVQTWSGDNRTSWNTLRYNIRMGLGMSLSGLYNLGHDVGGFSGNKPEPELFVRWVQNGVMHP RFTIHSWNDDKTVNEPWMYPEVTHIIRDTIKLRYRLMPYLYNTFWKAHHALESMLRPTFLDHEHDINTFEENDDYLLGKD LLVASVVEQDQRKREVYLPKNNAGWYDFYDHTYHLDGQTITTDAPLEKIPLFVKAGAIIPMSAREAYVDPQKDTYRELMV FPFIKAGEAINTIYDDDGESFRYQNNEYLQLMVKLRCSETNIYIDIHKQGNWIPAYKELRITLPDNETRQLVINGNVFTK GELFSLNNPKES
Sequences:
>Translated_492_residues MLSGYTSIGNKRYVFNWNYDKVPAPNAMSAHFHQAGMHLAANIKPCLLQDHPRYEEVKNLGLFIQDSEFNQPERSVFWDD EGSHLDFSNPKTIEWWKQNVTKQLLEYGIDSTWNDNNEYEVWDGNAKCVGFGKEIPIKLIRPLQPLLMMKSSYEAQREFA PNLRPYLISRSGSPGMNRYVQTWSGDNRTSWNTLRYNIRMGLGMSLSGLYNLGHDVGGFSGNKPEPELFVRWVQNGVMHP RFTIHSWNDDKTVNEPWMYPEVTHIIRDTIKLRYRLMPYLYNTFWKAHHALESMLRPTFLDHEHDINTFEENDDYLLGKD LLVASVVEQDQRKREVYLPKNNAGWYDFYDHTYHLDGQTITTDAPLEKIPLFVKAGAIIPMSAREAYVDPQKDTYRELMV FPFIKAGEAINTIYDDDGESFRYQNNEYLQLMVKLRCSETNIYIDIHKQGNWIPAYKELRITLPDNETRQLVINGNVFTK GELFSLNNPKES >Mature_492_residues MLSGYTSIGNKRYVFNWNYDKVPAPNAMSAHFHQAGMHLAANIKPCLLQDHPRYEEVKNLGLFIQDSEFNQPERSVFWDD EGSHLDFSNPKTIEWWKQNVTKQLLEYGIDSTWNDNNEYEVWDGNAKCVGFGKEIPIKLIRPLQPLLMMKSSYEAQREFA PNLRPYLISRSGSPGMNRYVQTWSGDNRTSWNTLRYNIRMGLGMSLSGLYNLGHDVGGFSGNKPEPELFVRWVQNGVMHP RFTIHSWNDDKTVNEPWMYPEVTHIIRDTIKLRYRLMPYLYNTFWKAHHALESMLRPTFLDHEHDINTFEENDDYLLGKD LLVASVVEQDQRKREVYLPKNNAGWYDFYDHTYHLDGQTITTDAPLEKIPLFVKAGAIIPMSAREAYVDPQKDTYRELMV FPFIKAGEAINTIYDDDGESFRYQNNEYLQLMVKLRCSETNIYIDIHKQGNWIPAYKELRITLPDNETRQLVINGNVFTK GELFSLNNPKES
Specific function: Unknown
COG id: COG1501
COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 31 family [H]
Homologues:
Organism=Homo sapiens, GI66346737, Length=424, Percent_Identity=30.8962264150943, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI88900491, Length=437, Percent_Identity=31.350114416476, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI38202257, Length=437, Percent_Identity=31.350114416476, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI119393895, Length=479, Percent_Identity=28.1837160751566, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI119393893, Length=479, Percent_Identity=28.1837160751566, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI119393891, Length=479, Percent_Identity=28.1837160751566, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI157364974, Length=412, Percent_Identity=26.2135922330097, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI221316699, Length=471, Percent_Identity=22.7176220806794, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI310115361, Length=232, Percent_Identity=32.3275862068966, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI2367323, Length=384, Percent_Identity=26.8229166666667, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI2367256, Length=420, Percent_Identity=23.3333333333333, Blast_Score=106, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71991189, Length=434, Percent_Identity=29.7235023041475, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17560800, Length=455, Percent_Identity=28.7912087912088, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17560798, Length=455, Percent_Identity=28.7912087912088, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI32563849, Length=272, Percent_Identity=30.1470588235294, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71985706, Length=272, Percent_Identity=26.4705882352941, Blast_Score=106, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6319706, Length=449, Percent_Identity=29.3986636971047, Blast_Score=167, Evalue=4e-42, Organism=Drosophila melanogaster, GI24643749, Length=450, Percent_Identity=28.2222222222222, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24643753, Length=450, Percent_Identity=28.2222222222222, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24643751, Length=450, Percent_Identity=28.2222222222222, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24643746, Length=450, Percent_Identity=28.2222222222222, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI21357605, Length=450, Percent_Identity=28.2222222222222, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI24650054, Length=368, Percent_Identity=24.1847826086957, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011013 - InterPro: IPR000322 - InterPro: IPR017853 [H]
Pfam domain/function: PF01055 Glyco_hydro_31 [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 57514; Mature: 57514
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGYTSIGNKRYVFNWNYDKVPAPNAMSAHFHQAGMHLAANIKPCLLQDHPRYEEVKNL CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEEECCCCCEEECCCCCHHHHHHC GLFIQDSEFNQPERSVFWDDEGSHLDFSNPKTIEWWKQNVTKQLLEYGIDSTWNDNNEYE CEEEECCCCCCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE VWDGNAKCVGFGKEIPIKLIRPLQPLLMMKSSYEAQREFAPNLRPYLISRSGSPGMNRYV EECCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEECCCCCCCCHHE QTWSGDNRTSWNTLRYNIRMGLGMSLSGLYNLGHDVGGFSGNKPEPELFVRWVQNGVMHP EECCCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC RFTIHSWNDDKTVNEPWMYPEVTHIIRDTIKLRYRLMPYLYNTFWKAHHALESMLRPTFL EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DHEHDINTFEENDDYLLGKDLLVASVVEQDQRKREVYLPKNNAGWYDFYDHTYHLDGQTI CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEECCCCCCCCEEECCCEEEECCCEE TTDAPLEKIPLFVKAGAIIPMSAREAYVDPQKDTYRELMVFPFIKAGEAINTIYDDDGES ECCCCHHHCCEEEECCEEEEECCCHHCCCCCHHHHHHHHHHCCHHCCCCCHHEECCCCCC FRYQNNEYLQLMVKLRCSETNIYIDIHKQGNWIPAYKELRITLPDNETRQLVINGNVFTK EEECCCCEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCEEEC GELFSLNNPKES CEEEECCCCCCC >Mature Secondary Structure MLSGYTSIGNKRYVFNWNYDKVPAPNAMSAHFHQAGMHLAANIKPCLLQDHPRYEEVKNL CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEEECCCCCEEECCCCCHHHHHHC GLFIQDSEFNQPERSVFWDDEGSHLDFSNPKTIEWWKQNVTKQLLEYGIDSTWNDNNEYE CEEEECCCCCCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE VWDGNAKCVGFGKEIPIKLIRPLQPLLMMKSSYEAQREFAPNLRPYLISRSGSPGMNRYV EECCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEECCCCCCCCHHE QTWSGDNRTSWNTLRYNIRMGLGMSLSGLYNLGHDVGGFSGNKPEPELFVRWVQNGVMHP EECCCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC RFTIHSWNDDKTVNEPWMYPEVTHIIRDTIKLRYRLMPYLYNTFWKAHHALESMLRPTFL EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DHEHDINTFEENDDYLLGKDLLVASVVEQDQRKREVYLPKNNAGWYDFYDHTYHLDGQTI CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEECCCCCCCCEEECCCEEEECCCEE TTDAPLEKIPLFVKAGAIIPMSAREAYVDPQKDTYRELMVFPFIKAGEAINTIYDDDGES ECCCCHHHCCEEEECCEEEEECCCHHCCCCCHHHHHHHHHHCCHHCCCCCHHEECCCCCC FRYQNNEYLQLMVKLRCSETNIYIDIHKQGNWIPAYKELRITLPDNETRQLVINGNVFTK EEECCCCEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCEEEC GELFSLNNPKES CEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10945254 [H]