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The map label for this gene is ompP1 [C]

Identifier: 126208409

GI number: 126208409

Start: 1074053

End: 1075444

Strand: Direct

Name: ompP1 [C]

Synonym: APL_0933

Alternate gene names: 126208409

Gene position: 1074053-1075444 (Clockwise)

Preceding gene: 126208397

Following gene: 126208410

Centisome position: 47.22

GC content: 43.53

Gene sequence:

>1392_bases
ATGAATCACACATTTAATAAAACTCTTATTGCTTCACTCTTAACTTTATCTGCCGGCGGTGTATCGGCTTCTTTATTCCA
ACTTGCGGAAGTTTCAACGTCAGGACTCGGTATGGCGTACGCAGGTAATGCGGCGGTTGCGGACAATGCGTCCGTAGTAG
CAAATAACCCGGCGTTAATGACTAAATTCAAACGCCCTGAAATTTCAGCCGGTGGCGTGCTCGTTGATACAGATTTGACC
GTTCGCGGAATCACTTCAAACGGTAATCAAGCATATGCAGGTAATGTCGTACCAACCGCACCGATTCCTAATATGTATTT
CGTATTACCGGTGAATGATGATTTCTCATTCGGTTTAGGTTATAACGTAAATTACGGTTTAAAAACAAAATATCCGACCG
ATTTTGCAGCAGGTTCATTAGGCGGTAATACCGAATTACAAGCGCATAACTTCAACCTAAGCGGCGCTTATAAATTAGGT
TACGGTTTTAGCATTGGTGCAGGTTTAAATGTTGTTTACTCTAAAGCGGAATTTATTCGTCATTTAGGTGATAAGGTCGA
AGCAGGTGCAGCTCGAGCTAAGGCAGGGGCAGCACAAGCAAGAGCGGCGGCTGCAAAAGCAAACGCAGCGGGTTTAACCG
CTCAAGCGCAAGCATTAACCGCCACAGCAAACAAATATCAAGCTTTAGGTAATTTATTATCCTCTTATAAACGTTCAACA
GAAGTAGCTCGTGTCAGTGGCGATGAATGGTCATTAGGTTGGAATGCCGGTTTAGTTTACGAGTTGAATGAAAATCACCG
CTGGGGTTTAGCATACCACTCTCCTGTAGATGTGAAATTTAAAGGTCATTACAGTAACAGTATTTCTGCTGCAACAGGAA
GTTCTATCGTTGCATTCCCAACAGCCGGTCAAGAGTTTCCGGGTAAATTAACACTTAATTTACCGGCATTCTGGGAATTA
TCGGGTTTCCATAAATTAACCGACCGCTTAGCGGTTCAATATAGCTGGAAACGTACCGAATGGAGCCGTTTAAAAACGTT
AGATGCTTACGGCACTAAAGGCGAACATTACTTACACAAAAAAGAAGATTTCTCGGATGCGAGTCGTTATGCACTAGGCG
TATCTTATGATGTATCCGAGCCATTAACATTACGTGCGGGTATCGCTTATGATGAAAACGCAAGCACCAATCATCCGTCA
ATTTCGATTCCGGATACAAACCGTATGTGGTATTCGGTGGGTGCAACCTATCGTGTAACCCCTGCGCTTTCGGTGGATGC
CGGTTATGCGTTCCTACGCGGTACGGCAAACAGCTTTGACGAAAAAGGTACGGCATTTAAAATTAAAGCTCGCGGGAATC
TCTACGGCTTAAATCTTAACTACAAATTTTAA

Upstream 100 bases:

>100_bases
AATCGCCCGCGTTTTGCTTTTTAGCAATCATAAAAATATGAACGACAGTTCACAAAAATGGCCTTTTATACGGCTATTTT
TTTATTTAAAAGGATACCTA

Downstream 100 bases:

>100_bases
TGCCTAACTCAAAATAGGAAATTACGAAGATGCCAAAGGCGTGTAAACTGATTACACGCCTTTTTATTTACTTTAAGGAG
AAATAATGAAATCAACGATT

Product: putative outer membrane protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNHTFNKTLIASLLTLSAGGVSASLFQLAEVSTSGLGMAYAGNAAVADNASVVANNPALMTKFKRPEISAGGVLVDTDLT
VRGITSNGNQAYAGNVVPTAPIPNMYFVLPVNDDFSFGLGYNVNYGLKTKYPTDFAAGSLGGNTELQAHNFNLSGAYKLG
YGFSIGAGLNVVYSKAEFIRHLGDKVEAGAARAKAGAAQARAAAAKANAAGLTAQAQALTATANKYQALGNLLSSYKRST
EVARVSGDEWSLGWNAGLVYELNENHRWGLAYHSPVDVKFKGHYSNSISAATGSSIVAFPTAGQEFPGKLTLNLPAFWEL
SGFHKLTDRLAVQYSWKRTEWSRLKTLDAYGTKGEHYLHKKEDFSDASRYALGVSYDVSEPLTLRAGIAYDENASTNHPS
ISIPDTNRMWYSVGATYRVTPALSVDAGYAFLRGTANSFDEKGTAFKIKARGNLYGLNLNYKF

Sequences:

>Translated_463_residues
MNHTFNKTLIASLLTLSAGGVSASLFQLAEVSTSGLGMAYAGNAAVADNASVVANNPALMTKFKRPEISAGGVLVDTDLT
VRGITSNGNQAYAGNVVPTAPIPNMYFVLPVNDDFSFGLGYNVNYGLKTKYPTDFAAGSLGGNTELQAHNFNLSGAYKLG
YGFSIGAGLNVVYSKAEFIRHLGDKVEAGAARAKAGAAQARAAAAKANAAGLTAQAQALTATANKYQALGNLLSSYKRST
EVARVSGDEWSLGWNAGLVYELNENHRWGLAYHSPVDVKFKGHYSNSISAATGSSIVAFPTAGQEFPGKLTLNLPAFWEL
SGFHKLTDRLAVQYSWKRTEWSRLKTLDAYGTKGEHYLHKKEDFSDASRYALGVSYDVSEPLTLRAGIAYDENASTNHPS
ISIPDTNRMWYSVGATYRVTPALSVDAGYAFLRGTANSFDEKGTAFKIKARGNLYGLNLNYKF
>Mature_463_residues
MNHTFNKTLIASLLTLSAGGVSASLFQLAEVSTSGLGMAYAGNAAVADNASVVANNPALMTKFKRPEISAGGVLVDTDLT
VRGITSNGNQAYAGNVVPTAPIPNMYFVLPVNDDFSFGLGYNVNYGLKTKYPTDFAAGSLGGNTELQAHNFNLSGAYKLG
YGFSIGAGLNVVYSKAEFIRHLGDKVEAGAARAKAGAAQARAAAAKANAAGLTAQAQALTATANKYQALGNLLSSYKRST
EVARVSGDEWSLGWNAGLVYELNENHRWGLAYHSPVDVKFKGHYSNSISAATGSSIVAFPTAGQEFPGKLTLNLPAFWEL
SGFHKLTDRLAVQYSWKRTEWSRLKTLDAYGTKGEHYLHKKEDFSDASRYALGVSYDVSEPLTLRAGIAYDENASTNHPS
ISIPDTNRMWYSVGATYRVTPALSVDAGYAFLRGTANSFDEKGTAFKIKARGNLYGLNLNYKF

Specific function: Involved In Translocation Of Long-Chain Fatty Acids Across The Outer Membrane. It Is A Receptor For The Bacteriophage T2. FADl May Form A Specific Channel. [C]

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ompP1/fadL family [H]

Homologues:

Organism=Escherichia coli, GI145693163, Length=462, Percent_Identity=40.04329004329, Blast_Score=337, Evalue=9e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005017 [H]

Pfam domain/function: PF03349 Toluene_X [H]

EC number: NA

Molecular weight: Translated: 49515; Mature: 49515

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHTFNKTLIASLLTLSAGGVSASLFQLAEVSTSGLGMAYAGNAAVADNASVVANNPALM
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCEEECCCCEEEECCCCEE
TKFKRPEISAGGVLVDTDLTVRGITSNGNQAYAGNVVPTAPIPNMYFVLPVNDDFSFGLG
EEECCCCCCCCCEEEECCEEEEEEECCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCC
YNVNYGLKTKYPTDFAAGSLGGNTELQAHNFNLSGAYKLGYGFSIGAGLNVVYSKAEFIR
EEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCEEECCCCEEEEHHHHHHH
HLGDKVEAGAARAKAGAAQARAAAAKANAAGLTAQAQALTATANKYQALGNLLSSYKRST
HHCCHHHCCHHHHHCCHHHHHHHHHCCCCCCCEEEHHEEEHHHHHHHHHHHHHHHHHHCC
EVARVSGDEWSLGWNAGLVYELNENHRWGLAYHSPVDVKFKGHYSNSISAATGSSIVAFP
CEEEECCCCEEECCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEC
TAGQEFPGKLTLNLPAFWELSGFHKLTDRLAVQYSWKRTEWSRLKTLDAYGTKGEHYLHK
CCCCCCCCEEEECCCCEEECCCHHHHHHHEEEEEEECCCCHHHHEEECCCCCCCCCCCCC
KEDFSDASRYALGVSYDVSEPLTLRAGIAYDENASTNHPSISIPDTNRMWYSVGATYRVT
CCCCCCHHHEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEECCCCCCEEEEECCEEEEC
PALSVDAGYAFLRGTANSFDEKGTAFKIKARGNLYGLNLNYKF
CEEEECCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEECC
>Mature Secondary Structure
MNHTFNKTLIASLLTLSAGGVSASLFQLAEVSTSGLGMAYAGNAAVADNASVVANNPALM
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCEEECCCCEEEECCCCEE
TKFKRPEISAGGVLVDTDLTVRGITSNGNQAYAGNVVPTAPIPNMYFVLPVNDDFSFGLG
EEECCCCCCCCCEEEECCEEEEEEECCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCC
YNVNYGLKTKYPTDFAAGSLGGNTELQAHNFNLSGAYKLGYGFSIGAGLNVVYSKAEFIR
EEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCEEECCCCEEEEHHHHHHH
HLGDKVEAGAARAKAGAAQARAAAAKANAAGLTAQAQALTATANKYQALGNLLSSYKRST
HHCCHHHCCHHHHHCCHHHHHHHHHCCCCCCCEEEHHEEEHHHHHHHHHHHHHHHHHHCC
EVARVSGDEWSLGWNAGLVYELNENHRWGLAYHSPVDVKFKGHYSNSISAATGSSIVAFP
CEEEECCCCEEECCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEC
TAGQEFPGKLTLNLPAFWELSGFHKLTDRLAVQYSWKRTEWSRLKTLDAYGTKGEHYLHK
CCCCCCCCEEEECCCCEEECCCHHHHHHHEEEEEEECCCCHHHHEEECCCCCCCCCCCCC
KEDFSDASRYALGVSYDVSEPLTLRAGIAYDENASTNHPSISIPDTNRMWYSVGATYRVT
CCCCCCHHHEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEECCCCCCEEEEECCEEEEC
PALSVDAGYAFLRGTANSFDEKGTAFKIKARGNLYGLNLNYKF
CEEEECCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]