Click here to switch to the map view.

The map label for this gene is 126208398

Identifier: 126208398

GI number: 126208398

Start: 1064548

End: 1065114

Strand: Reverse

Name: 126208398

Synonym: APL_0922

Alternate gene names: NA

Gene position: 1065114-1064548 (Counterclockwise)

Preceding gene: 126208399

Following gene: 126208395

Centisome position: 46.83

GC content: 29.45

Gene sequence:

>567_bases
TTGTGCGAACCGAAAAAAGATATTTACTACAAACTTGCCCTGAATAGGTTAAGAGAAAAAGGCTATATAATTCAATCGAT
TACCTGCGATGGTAGACGTGGCTTGATGAAAGATTTATTTAATACGCCAGTACAGATGTGTCAATTTCATATGATGGCAA
TTGTGATGAGGAAATTAAGAAAAAAACATCAATCACAAGCAGGTAAAGAATTAAAAATAATTGCAAAAACACTCACAAAA
AGCTCAAAAAATGAATTTTATCGGCAATTGCATTCTTGGTTTATAAAACACCAAGTATTTTTAAAAGAACGAAGTGATAA
AGCCAATGAAAAAGGCTATTTTCCTTATAAACATCGCAATGTAAGAAGTGCTTATGCTAGTTTAAAGCGTTATATGGATT
ATATTTTTACGTATGAGAAATATTCTGAATTAAATATAGAAAATACAACAAATCGCTTAGAGGGATTATTTAGCGAACTT
AAGCGAAAATTAAATAATCATAATGGATTAACGAAAAAGCGTAAGATATTGTTTATACAGGATTTTTTAAATAAAAAGAG
TGGCTAA

Upstream 100 bases:

>100_bases
ACCACCTTTAAATCAATACCTAAACATCATTATGGATACAACATTTTGGCGTATTAGTACTAATGGATTCAAATTCAACT
AATGTGATTTCTCATTATTT

Downstream 100 bases:

>100_bases
CATTTAACGAAAATGAACATTAACAACAATTTTGTCCACTTGGCATAGTTTTTGGCAGATCAGCAACAAATTTGTCTACT
ATGCCTTTATTAATCTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MCEPKKDIYYKLALNRLREKGYIIQSITCDGRRGLMKDLFNTPVQMCQFHMMAIVMRKLRKKHQSQAGKELKIIAKTLTK
SSKNEFYRQLHSWFIKHQVFLKERSDKANEKGYFPYKHRNVRSAYASLKRYMDYIFTYEKYSELNIENTTNRLEGLFSEL
KRKLNNHNGLTKKRKILFIQDFLNKKSG

Sequences:

>Translated_188_residues
MCEPKKDIYYKLALNRLREKGYIIQSITCDGRRGLMKDLFNTPVQMCQFHMMAIVMRKLRKKHQSQAGKELKIIAKTLTK
SSKNEFYRQLHSWFIKHQVFLKERSDKANEKGYFPYKHRNVRSAYASLKRYMDYIFTYEKYSELNIENTTNRLEGLFSEL
KRKLNNHNGLTKKRKILFIQDFLNKKSG
>Mature_188_residues
MCEPKKDIYYKLALNRLREKGYIIQSITCDGRRGLMKDLFNTPVQMCQFHMMAIVMRKLRKKHQSQAGKELKIIAKTLTK
SSKNEFYRQLHSWFIKHQVFLKERSDKANEKGYFPYKHRNVRSAYASLKRYMDYIFTYEKYSELNIENTTNRLEGLFSEL
KRKLNNHNGLTKKRKILFIQDFLNKKSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22591; Mature: 22591

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCEPKKDIYYKLALNRLREKGYIIQSITCDGRRGLMKDLFNTPVQMCQFHMMAIVMRKLR
CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
KKHQSQAGKELKIIAKTLTKSSKNEFYRQLHSWFIKHQVFLKERSDKANEKGYFPYKHRN
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VRSAYASLKRYMDYIFTYEKYSELNIENTTNRLEGLFSELKRKLNNHNGLTKKRKILFIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
DFLNKKSG
HHHCCCCC
>Mature Secondary Structure
MCEPKKDIYYKLALNRLREKGYIIQSITCDGRRGLMKDLFNTPVQMCQFHMMAIVMRKLR
CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
KKHQSQAGKELKIIAKTLTKSSKNEFYRQLHSWFIKHQVFLKERSDKANEKGYFPYKHRN
HHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VRSAYASLKRYMDYIFTYEKYSELNIENTTNRLEGLFSELKRKLNNHNGLTKKRKILFIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
DFLNKKSG
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA