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The map label for this gene is irp

Identifier: 126208395

GI number: 126208395

Start: 1059147

End: 1061495

Strand: Reverse

Name: irp

Synonym: APL_0919

Alternate gene names: NA

Gene position: 1061495-1059147 (Counterclockwise)

Preceding gene: 126208398

Following gene: 126208389

Centisome position: 46.67

GC content: 42.4

Gene sequence:

>2349_bases
GTGTTGATTTCAGCCCAATTTAGCCCGCTTGTTTGGGCAAACAATAACGATGTTGCAGTGTTAGACGAAGTTTCAGTAGT
TGGTAGCACGCCGAGTATTTCGCAAGGAAGTGAAGTTACCTTACTGAAAGTCAGTGATAAAATTATTGCAGGTAAGGAAT
TTAAAAAGCGTTCGGCAACGCTGGGCAATGCGCTTGCAGCGGAGTTAGGTGTACACAGTAACCCGTTTGGCGGTGGCGCG
AGTAAGCCAATTATCCGTGGCCAAGAAGGCGCGAGAATTCGTATTCTGCAAAACGGTTCGGATGTGATTGATATGTCAAA
CCTATCGCCAGATCATGCGGTGGTTGCCGATTCATTGCTTGCTAAACAGGTAGAAATTTTGCGTGGTTCCAGTACCTTGC
TTTATGCCAGCAGTTCACCGGCGGGGATTGTGAACGTGGTAGATAAACGTATTCCAACTGAGATCCCAGAAAAGGGCTAT
GAGGTGGAACTCAATAGCCGTTTTGATACCGCTGCCAAAGAGAAAGTCGGCGCATTAGGGGCAACCTTTGGTATCGGCAA
ACATATTGCGGTGCGAGCCGAAGGACTGACCCGCCACAGCGATAACTACCGTGTTCCAGGGATTAATTTAGGTGAACGGT
TAAACTATGTCCCGGATACTTATAATAAATCAAAAGTCGGCACGTTAGGGTTATCCTTTGTTGGTGAGCAAGGTTATATC
GGTGCGTCATACAGTAAACGGCGGGATAACTATGGCTTACCAGGGCATAACCATAAATTCGATTTCTGTATTGGACATAT
TTATGGCAATAAACAGGGCAAATACGCCTATACCTATCTCTATCCGCATTTGATTGGCGAGGAAAACATTGGGAGCAATC
CGCATTTCCACTGTGGAACTGATCATGCAGAAGATGGTACACACAGCCACGATAATCCATTCGAACACGATCACGACCAT
ACACACCCTGGTCCATGGGTTGATTTAGAATCCAAACGATTTGATGTAAAAGCCGAGTTGCGTCAGCCATTCAAAGGTAT
TGATAAAATTAAAGTAAGCTACGCCGATGCCGATTATTACCATGACGAAAAAGATGCCGGTGTGTTAGCAACACGCTACC
ATAAACAGCTGAAAAAAGATCAGGATTATGGCAAACCGGTCAATATTTTCAAAAATCGAGGCAAAAATGCCCGCTTGGAA
ATCTATCATGCACCACTAGGTGGTTTAACCGGTGTATGGGGCGTGCAGTACCAAACTCAGAAGAGCAGCATGCATGCACC
GAAAGATCGTGAAGTGAAATTCCCGCTGGTTGAAAACACGAATAAACAGATGAGCCTGTTTGGTATTGAGCAATATATGT
GGGATAATTTTGCTCTTGAATTTGCTGGACGAGTAGAAAAGCAGAAGATTGAAATTGAATACGATCGCAATGAAATCAAA
CGCTTGCAGGATCATTATCGCATTAGTGGTGGTAAACAGGTTGAGCCAGATCTGTCACCTTATAACCAAAACGCTTATGC
CTATTCCAGTACGCTAAATTGGTTCTTCCACCCAGATTATCAGCTCTCGTTTACTGCATCGCATAATGAACGTTTCCCAA
CGCCGATGGAGCTGTATTATCATGGACAGCATATTGCGACTAACTCGTTTGAATACGGCAATAAAGATTTGAAAAAAGAG
CAATCTAACAATGTAGAACTAGGCTTAGGTTATCAAACTGAGCGAGTTGGGTACAAAGTGAATGTTTATTACAACCACTT
TAAAAACTACATTTACAATGAAAATTTATTCCGTGAAAATCAGTTATTTATGCGTCGTTATAACCAGGCAAAAGCCCGTT
TTTACGGCATAGAAGCTGAGGCAAGCTACCGCTTTAACGACAAATACCAAGCTACGATTTTTGGTGATATGGTAAGAGGC
TGGCTGACCAATTTACCTCCACTGACGGTAAACAGCGATTACAGCGTATTTAAAGATTATTTACCAAAAGATGCTAAACC
AGGTGAAGATTATTTGATTTATCGTGCTGATCAAAATACGCCTCGAACCCCTCCTGTACGACTAGGTTTTCGTTTTAATG
CGGAGTTTACCCCAAATTGGTCAGGAGATTTAGAATTGATCCGTACCTTTACTCAACGCCGTACCAGTCAGTTGGAATAT
ATTACGGAAGGTAATACGATGTTAAATATTGGTGTGGCATATAGTAATAAGTGGAAAGATTTGGATTACAAAATCAGTCT
AAACGGTACTAATTTACTCAACCAACCGGTCTATATTCACACCTCTTACCACCAATTTGTACCGCAAACGGGACGGAATT
TTATATTGGTTGTGAATGTTAAATTCTAA

Upstream 100 bases:

>100_bases
TTTTTTATGGTTATTATTGTCAAGTCTCATATTTTGCAGTAACTTATTAACCATAATTATTTTATGGAGAATAAAATTGT
TTAATAAAAAATTACTAGCT

Downstream 100 bases:

>100_bases
AAACAAGGAGCCTATGAATGATCTGACCCCAAAAAGTTATACTGTTTAATTTAAGGACTGAGTTCTGTATTGTACAGGGC
TCAGTCCTTTTAATTTCACT

Product: iron-regulated outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 782; Mature: 782

Protein sequence:

>782_residues
MLISAQFSPLVWANNNDVAVLDEVSVVGSTPSISQGSEVTLLKVSDKIIAGKEFKKRSATLGNALAAELGVHSNPFGGGA
SKPIIRGQEGARIRILQNGSDVIDMSNLSPDHAVVADSLLAKQVEILRGSSTLLYASSSPAGIVNVVDKRIPTEIPEKGY
EVELNSRFDTAAKEKVGALGATFGIGKHIAVRAEGLTRHSDNYRVPGINLGERLNYVPDTYNKSKVGTLGLSFVGEQGYI
GASYSKRRDNYGLPGHNHKFDFCIGHIYGNKQGKYAYTYLYPHLIGEENIGSNPHFHCGTDHAEDGTHSHDNPFEHDHDH
THPGPWVDLESKRFDVKAELRQPFKGIDKIKVSYADADYYHDEKDAGVLATRYHKQLKKDQDYGKPVNIFKNRGKNARLE
IYHAPLGGLTGVWGVQYQTQKSSMHAPKDREVKFPLVENTNKQMSLFGIEQYMWDNFALEFAGRVEKQKIEIEYDRNEIK
RLQDHYRISGGKQVEPDLSPYNQNAYAYSSTLNWFFHPDYQLSFTASHNERFPTPMELYYHGQHIATNSFEYGNKDLKKE
QSNNVELGLGYQTERVGYKVNVYYNHFKNYIYNENLFRENQLFMRRYNQAKARFYGIEAEASYRFNDKYQATIFGDMVRG
WLTNLPPLTVNSDYSVFKDYLPKDAKPGEDYLIYRADQNTPRTPPVRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEY
ITEGNTMLNIGVAYSNKWKDLDYKISLNGTNLLNQPVYIHTSYHQFVPQTGRNFILVVNVKF

Sequences:

>Translated_782_residues
MLISAQFSPLVWANNNDVAVLDEVSVVGSTPSISQGSEVTLLKVSDKIIAGKEFKKRSATLGNALAAELGVHSNPFGGGA
SKPIIRGQEGARIRILQNGSDVIDMSNLSPDHAVVADSLLAKQVEILRGSSTLLYASSSPAGIVNVVDKRIPTEIPEKGY
EVELNSRFDTAAKEKVGALGATFGIGKHIAVRAEGLTRHSDNYRVPGINLGERLNYVPDTYNKSKVGTLGLSFVGEQGYI
GASYSKRRDNYGLPGHNHKFDFCIGHIYGNKQGKYAYTYLYPHLIGEENIGSNPHFHCGTDHAEDGTHSHDNPFEHDHDH
THPGPWVDLESKRFDVKAELRQPFKGIDKIKVSYADADYYHDEKDAGVLATRYHKQLKKDQDYGKPVNIFKNRGKNARLE
IYHAPLGGLTGVWGVQYQTQKSSMHAPKDREVKFPLVENTNKQMSLFGIEQYMWDNFALEFAGRVEKQKIEIEYDRNEIK
RLQDHYRISGGKQVEPDLSPYNQNAYAYSSTLNWFFHPDYQLSFTASHNERFPTPMELYYHGQHIATNSFEYGNKDLKKE
QSNNVELGLGYQTERVGYKVNVYYNHFKNYIYNENLFRENQLFMRRYNQAKARFYGIEAEASYRFNDKYQATIFGDMVRG
WLTNLPPLTVNSDYSVFKDYLPKDAKPGEDYLIYRADQNTPRTPPVRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEY
ITEGNTMLNIGVAYSNKWKDLDYKISLNGTNLLNQPVYIHTSYHQFVPQTGRNFILVVNVKF
>Mature_782_residues
MLISAQFSPLVWANNNDVAVLDEVSVVGSTPSISQGSEVTLLKVSDKIIAGKEFKKRSATLGNALAAELGVHSNPFGGGA
SKPIIRGQEGARIRILQNGSDVIDMSNLSPDHAVVADSLLAKQVEILRGSSTLLYASSSPAGIVNVVDKRIPTEIPEKGY
EVELNSRFDTAAKEKVGALGATFGIGKHIAVRAEGLTRHSDNYRVPGINLGERLNYVPDTYNKSKVGTLGLSFVGEQGYI
GASYSKRRDNYGLPGHNHKFDFCIGHIYGNKQGKYAYTYLYPHLIGEENIGSNPHFHCGTDHAEDGTHSHDNPFEHDHDH
THPGPWVDLESKRFDVKAELRQPFKGIDKIKVSYADADYYHDEKDAGVLATRYHKQLKKDQDYGKPVNIFKNRGKNARLE
IYHAPLGGLTGVWGVQYQTQKSSMHAPKDREVKFPLVENTNKQMSLFGIEQYMWDNFALEFAGRVEKQKIEIEYDRNEIK
RLQDHYRISGGKQVEPDLSPYNQNAYAYSSTLNWFFHPDYQLSFTASHNERFPTPMELYYHGQHIATNSFEYGNKDLKKE
QSNNVELGLGYQTERVGYKVNVYYNHFKNYIYNENLFRENQLFMRRYNQAKARFYGIEAEASYRFNDKYQATIFGDMVRG
WLTNLPPLTVNSDYSVFKDYLPKDAKPGEDYLIYRADQNTPRTPPVRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEY
ITEGNTMLNIGVAYSNKWKDLDYKISLNGTNLLNQPVYIHTSYHQFVPQTGRNFILVVNVKF

Specific function: Probable receptor, tonB-dependent [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 88929; Mature: 88929

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISAQFSPLVWANNNDVAVLDEVSVVGSTPSISQGSEVTLLKVSDKIIAGKEFKKRSAT
CEEECCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCEECCCHHHHHHHH
LGNALAAELGVHSNPFGGGASKPIIRGQEGARIRILQNGSDVIDMSNLSPDHAVVADSLL
HHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHH
AKQVEILRGSSTLLYASSSPAGIVNVVDKRIPTEIPEKGYEVELNSRFDTAAKEKVGALG
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHCC
ATFGIGKHIAVRAEGLTRHSDNYRVPGINLGERLNYVPDTYNKSKVGTLGLSFVGEQGYI
HHHCCCCEEEEEECCCEECCCCEECCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCEE
GASYSKRRDNYGLPGHNHKFDFCIGHIYGNKQGKYAYTYLYPHLIGEENIGSNPHFHCGT
CCCHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCEECCC
DHAEDGTHSHDNPFEHDHDHTHPGPWVDLESKRFDVKAELRQPFKGIDKIKVSYADADYY
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCCCEEEEEEECCCCC
HDEKDAGVLATRYHKQLKKDQDYGKPVNIFKNRGKNARLEIYHAPLGGLTGVWGVQYQTQ
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEC
KSSMHAPKDREVKFPLVENTNKQMSLFGIEQYMWDNFALEFAGRVEKQKIEIEYDRNEIK
CCCCCCCCCCCEEECCCCCCCCEEEEEEHHHHHHCCHHEEHHCCCEEEEEEEEECHHHHH
RLQDHYRISGGKQVEPDLSPYNQNAYAYSSTLNWFFHPDYQLSFTASHNERFPTPMELYY
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEE
HGQHIATNSFEYGNKDLKKEQSNNVELGLGYQTERVGYKVNVYYNHFKNYIYNENLFREN
CCCEEECCCCCCCCHHHHHHCCCCEEEEECEEEHHCCEEEEEEEEHHHHHHCCCCCCCHH
QLFMRRYNQAKARFYGIEAEASYRFNDKYQATIFGDMVRGWLTNLPPLTVNSDYSVFKDY
HHHHHHHHCCCEEEEEEECCCCEEECCCEEEEEHHHHHHHHHHCCCCEEECCCHHHHHHH
LPKDAKPGEDYLIYRADQNTPRTPPVRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEY
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCEECCCCCCCHHHHHHHHHHHHCCEEE
ITEGNTMLNIGVAYSNKWKDLDYKISLNGTNLLNQPVYIHTSYHQFVPQTGRNFILVVNV
EECCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEECHHHHCCCCCCCEEEEEEE
KF
CC
>Mature Secondary Structure
MLISAQFSPLVWANNNDVAVLDEVSVVGSTPSISQGSEVTLLKVSDKIIAGKEFKKRSAT
CEEECCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCEECCCHHHHHHHH
LGNALAAELGVHSNPFGGGASKPIIRGQEGARIRILQNGSDVIDMSNLSPDHAVVADSLL
HHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHH
AKQVEILRGSSTLLYASSSPAGIVNVVDKRIPTEIPEKGYEVELNSRFDTAAKEKVGALG
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHCC
ATFGIGKHIAVRAEGLTRHSDNYRVPGINLGERLNYVPDTYNKSKVGTLGLSFVGEQGYI
HHHCCCCEEEEEECCCEECCCCEECCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCEE
GASYSKRRDNYGLPGHNHKFDFCIGHIYGNKQGKYAYTYLYPHLIGEENIGSNPHFHCGT
CCCHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCEECCC
DHAEDGTHSHDNPFEHDHDHTHPGPWVDLESKRFDVKAELRQPFKGIDKIKVSYADADYY
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCCCEEEEEEECCCCC
HDEKDAGVLATRYHKQLKKDQDYGKPVNIFKNRGKNARLEIYHAPLGGLTGVWGVQYQTQ
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEC
KSSMHAPKDREVKFPLVENTNKQMSLFGIEQYMWDNFALEFAGRVEKQKIEIEYDRNEIK
CCCCCCCCCCCEEECCCCCCCCEEEEEEHHHHHHCCHHEEHHCCCEEEEEEEEECHHHHH
RLQDHYRISGGKQVEPDLSPYNQNAYAYSSTLNWFFHPDYQLSFTASHNERFPTPMELYY
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEE
HGQHIATNSFEYGNKDLKKEQSNNVELGLGYQTERVGYKVNVYYNHFKNYIYNENLFREN
CCCEEECCCCCCCCHHHHHHCCCCEEEEECEEEHHCCEEEEEEEEHHHHHHCCCCCCCHH
QLFMRRYNQAKARFYGIEAEASYRFNDKYQATIFGDMVRGWLTNLPPLTVNSDYSVFKDY
HHHHHHHHCCCEEEEEEECCCCEEECCCEEEEEHHHHHHHHHHCCCCEEECCCHHHHHHH
LPKDAKPGEDYLIYRADQNTPRTPPVRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEY
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCEECCCCCCCHHHHHHHHHHHHCCEEE
ITEGNTMLNIGVAYSNKWKDLDYKISLNGTNLLNQPVYIHTSYHQFVPQTGRNFILVVNV
EECCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEECHHHHCCCCCCCEEEEEEE
KF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]