| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is folE
Identifier: 126208379
GI number: 126208379
Start: 1045805
End: 1046461
Strand: Reverse
Name: folE
Synonym: APL_0903
Alternate gene names: 126208379
Gene position: 1046461-1045805 (Counterclockwise)
Preceding gene: 126208381
Following gene: 126208378
Centisome position: 46.01
GC content: 43.53
Gene sequence:
>657_bases ATGAGCATTATCTCCGCAGAAGCCCAAAAAGTGCGTGAAGCCTTAATTGCGAAAGGCATTGAAACCCCAACCGTTCAACT GACTAAAGACAAAGATTCCCGTCGTGCCGAAATTCAACAGCATATGCGTTCGGTACTGGAATTACTGGGATTGGATTTAC AAGACGATAGTTTGGAAGAAACTCCGCACCGCTTGGCGAAGATGTATGTCGATGAAATTTTTAGCGGCTTGGATTATGCG ACTTTCCCGAAAATTACCAATATTGAAAATCGTATGAAAGTCAGCGAAATGGTGTTGGTGGACGATATTACCCTGACTTC CACTTGCGAACACCATTTTGTGACGATTGACGGTAAAGTGGCGGTGGCGTATTACCCGAAAAAATGGGTAATCGGCTTAT CTAAAATTAATCGCGTGGTGCAATTTTTCGCTCAACGTCCACAGGTGCAAGAGCGTTTTACCGAACAGATCCTAACCGCA TTCCAAACGATTTTAGAAACGGACGATGTCGCAGTTTTTGTTAAAGCAACACATTTCTGCGTGAAATGCCGCGGCGTGAA AGATACGAATAGCTATACGGTAACGTCGGCATTCGGCGGCGTTTTCTTAGAAGACAGAGAAACGCGCAAAGAATTTTTGG GTTTAATCAATAAATAA
Upstream 100 bases:
>100_bases ACGGATTATTGGGACGAGTTATTATTGAGATAAATTTTAGTGCTATTTTTTTTGATGTCAATTTGTTAAAATTCTCGCCT TGATTTTTAGAGGAACCCCA
Downstream 100 bases:
>100_bases TTGAACGGATAAGCGGTCTGATTTTGGCAAATTTTTGCAAAATTTAACCGCTTATCTTTTTTGATGTAGAGCAAAATAAT GAAAATTGCATTAGGCATTG
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSIISAEAQKVREALIAKGIETPTVQLTKDKDSRRAEIQQHMRSVLELLGLDLQDDSLEETPHRLAKMYVDEIFSGLDYA TFPKITNIENRMKVSEMVLVDDITLTSTCEHHFVTIDGKVAVAYYPKKWVIGLSKINRVVQFFAQRPQVQERFTEQILTA FQTILETDDVAVFVKATHFCVKCRGVKDTNSYTVTSAFGGVFLEDRETRKEFLGLINK
Sequences:
>Translated_218_residues MSIISAEAQKVREALIAKGIETPTVQLTKDKDSRRAEIQQHMRSVLELLGLDLQDDSLEETPHRLAKMYVDEIFSGLDYA TFPKITNIENRMKVSEMVLVDDITLTSTCEHHFVTIDGKVAVAYYPKKWVIGLSKINRVVQFFAQRPQVQERFTEQILTA FQTILETDDVAVFVKATHFCVKCRGVKDTNSYTVTSAFGGVFLEDRETRKEFLGLINK >Mature_217_residues SIISAEAQKVREALIAKGIETPTVQLTKDKDSRRAEIQQHMRSVLELLGLDLQDDSLEETPHRLAKMYVDEIFSGLDYAT FPKITNIENRMKVSEMVLVDDITLTSTCEHHFVTIDGKVAVAYYPKKWVIGLSKINRVVQFFAQRPQVQERFTEQILTAF QTILETDDVAVFVKATHFCVKCRGVKDTNSYTVTSAFGGVFLEDRETRKEFLGLINK
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=180, Percent_Identity=44.4444444444444, Blast_Score=134, Evalue=7e-32, Organism=Homo sapiens, GI4503949, Length=180, Percent_Identity=44.4444444444444, Blast_Score=134, Evalue=7e-32, Organism=Homo sapiens, GI66932970, Length=141, Percent_Identity=40.4255319148936, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI66932972, Length=141, Percent_Identity=40.4255319148936, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1788476, Length=215, Percent_Identity=64.1860465116279, Blast_Score=279, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17560486, Length=183, Percent_Identity=42.0765027322404, Blast_Score=140, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6321706, Length=193, Percent_Identity=40.4145077720207, Blast_Score=124, Evalue=1e-29, Organism=Drosophila melanogaster, GI24656796, Length=182, Percent_Identity=40.6593406593407, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24656782, Length=182, Percent_Identity=40.6593406593407, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24656791, Length=122, Percent_Identity=49.1803278688525, Blast_Score=116, Evalue=1e-26,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_ACTP2 (A3N0R3)
Other databases:
- EMBL: CP000569 - RefSeq: YP_001053604.1 - ProteinModelPortal: A3N0R3 - SMR: A3N0R3 - STRING: A3N0R3 - GeneID: 4850242 - GenomeReviews: CP000569_GR - KEGG: apl:APL_0903 - eggNOG: COG0302 - HOGENOM: HBG370191 - OMA: ACSHHLC - PhylomeDB: A3N0R3 - ProtClustDB: PRK09347 - BioCyc: APLE416269:APL_0903-MONOMER - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 24838; Mature: 24707
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIISAEAQKVREALIAKGIETPTVQLTKDKDSRRAEIQQHMRSVLELLGLDLQDDSLEE CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH TPHRLAKMYVDEIFSGLDYATFPKITNIENRMKVSEMVLVDDITLTSTCEHHFVTIDGKV HHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHEEECCEEECCCCCEEEEECCEE AVAYYPKKWVIGLSKINRVVQFFAQRPQVQERFTEQILTAFQTILETDDVAVFVKATHFC EEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHEEE VKCRGVKDTNSYTVTSAFGGVFLEDRETRKEFLGLINK EEECCCCCCCCEEEEECCCCEEECCHHHHHHHHHHCCC >Mature Secondary Structure SIISAEAQKVREALIAKGIETPTVQLTKDKDSRRAEIQQHMRSVLELLGLDLQDDSLEE CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH TPHRLAKMYVDEIFSGLDYATFPKITNIENRMKVSEMVLVDDITLTSTCEHHFVTIDGKV HHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHEEECCEEECCCCCEEEEECCEE AVAYYPKKWVIGLSKINRVVQFFAQRPQVQERFTEQILTAFQTILETDDVAVFVKATHFC EEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHEEE VKCRGVKDTNSYTVTSAFGGVFLEDRETRKEFLGLINK EEECCCCCCCCEEEEECCCCEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA