| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is lpxL [H]
Identifier: 126208376
GI number: 126208376
Start: 1043459
End: 1044400
Strand: Reverse
Name: lpxL [H]
Synonym: APL_0900
Alternate gene names: 126208376
Gene position: 1044400-1043459 (Counterclockwise)
Preceding gene: 126208378
Following gene: 126208375
Centisome position: 45.92
GC content: 44.48
Gene sequence:
>942_bases ATGACTGAGAATAAAAACATTCCGCCGTTTGAGTTACGCTTCTTGCACCCGAAATATTGGGGGCTTTGGCTGGGGCTGGG GTTATTTAAATTAATTTTGTGCTTACCTTATCCGGTCCTGGTCGTATTAGGTAAGGGGATAGGTAAACTGTTTGCCAAAC TTGGTTTCGGTAAACGTAGAATGCGTATTGCACGCCGGAATTTAGAACTCTGCTTTCCGGATTATTCCGCCGAACGGATT CAAGCTATTTTAGCCAAAAATATCGAATCGGTCGGTATGGCGATTATTGAAACCGGTATGGCGTGGTTTTGGTCGGATAA GCGTATTCTTAAATGGTCGAAAATCGAAGGGCTGGAACATCTTAAAAATCAGCCGCAAGGAGCGGGGATTTTATTAGTCG GTGTGCATTTTCTCACGTTAGAAATGGGCGCACGCATTTTAGGGCTTCATCACCAAGGTGTGGGTGTTTATCGACCGAAT GATAATCCGTTATTAGATTGGATTCAGTTTCGCGGCAGAGTACGCTCAAATAAGGCGATGCTCGATCGTAAAGACTTACG CGGTATGATTCGCGCTTTAAAAGCGGGCGAGACGATTTGGTATGCGCCGGATCATGATTACGGACGTAAAAATAGCGTAT TCGTGCCGTTTTTTGCCGTAAATGAAGCTTGTACTACGGCGGGGACGCGAATGTTATTACGTTCCGCACCGAATACGGTG GTCGTGCCGTTCAGCCCGATTCGAAATGACGATTTTTCCGGATATACGGTAAAAGTCAGTCCGGCGGTTGATTTTAGTGA ATGTAGTGATGAATTGGATACTGCAACCAAAATGAATAAAGTCGTTGAAACTGAAATTCTGAAAGAAGTCAGCCAATATA TGTGGTTACATCGCCGGTTTAAAACACGCCCGCAAGAATCGGACAAGAGTTTATACGATTAA
Upstream 100 bases:
>100_bases ATCAAGTCAAAAACCGAAGCAAAATTTAAAAATTTGATCTACTTAACACTTTTTTAGTGTTTTTGATTATAATCTATCCG AAAAATTAGGATGGTAAAAA
Downstream 100 bases:
>100_bases AATAAACCCGACATGAATTAATAGTGTCGGGTTTATTTTTTCTTTCCGTATTTTCTTTAATTTTTTAGTTGTTATTCGCA AAAAATACTTGCATATTTAA
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: Heat shock protein B [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTENKNIPPFELRFLHPKYWGLWLGLGLFKLILCLPYPVLVVLGKGIGKLFAKLGFGKRRMRIARRNLELCFPDYSAERI QAILAKNIESVGMAIIETGMAWFWSDKRILKWSKIEGLEHLKNQPQGAGILLVGVHFLTLEMGARILGLHHQGVGVYRPN DNPLLDWIQFRGRVRSNKAMLDRKDLRGMIRALKAGETIWYAPDHDYGRKNSVFVPFFAVNEACTTAGTRMLLRSAPNTV VVPFSPIRNDDFSGYTVKVSPAVDFSECSDELDTATKMNKVVETEILKEVSQYMWLHRRFKTRPQESDKSLYD
Sequences:
>Translated_313_residues MTENKNIPPFELRFLHPKYWGLWLGLGLFKLILCLPYPVLVVLGKGIGKLFAKLGFGKRRMRIARRNLELCFPDYSAERI QAILAKNIESVGMAIIETGMAWFWSDKRILKWSKIEGLEHLKNQPQGAGILLVGVHFLTLEMGARILGLHHQGVGVYRPN DNPLLDWIQFRGRVRSNKAMLDRKDLRGMIRALKAGETIWYAPDHDYGRKNSVFVPFFAVNEACTTAGTRMLLRSAPNTV VVPFSPIRNDDFSGYTVKVSPAVDFSECSDELDTATKMNKVVETEILKEVSQYMWLHRRFKTRPQESDKSLYD >Mature_312_residues TENKNIPPFELRFLHPKYWGLWLGLGLFKLILCLPYPVLVVLGKGIGKLFAKLGFGKRRMRIARRNLELCFPDYSAERIQ AILAKNIESVGMAIIETGMAWFWSDKRILKWSKIEGLEHLKNQPQGAGILLVGVHFLTLEMGARILGLHHQGVGVYRPND NPLLDWIQFRGRVRSNKAMLDRKDLRGMIRALKAGETIWYAPDHDYGRKNSVFVPFFAVNEACTTAGTRMLLRSAPNTVV VPFSPIRNDDFSGYTVKVSPAVDFSECSDELDTATKMNKVVETEILKEVSQYMWLHRRFKTRPQESDKSLYD
Specific function: Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI1787292, Length=305, Percent_Identity=57.3770491803279, Blast_Score=353, Evalue=6e-99, Organism=Escherichia coli, GI87082094, Length=304, Percent_Identity=50, Blast_Score=314, Evalue=5e-87, Organism=Escherichia coli, GI1788161, Length=309, Percent_Identity=27.5080906148867, Blast_Score=114, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 35816; Mature: 35685
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENKNIPPFELRFLHPKYWGLWLGLGLFKLILCLPYPVLVVLGKGIGKLFAKLGFGKRR CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCHHH MRIARRNLELCFPDYSAERIQAILAKNIESVGMAIIETGMAWFWSDKRILKWSKIEGLEH HHHHHCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHH LKNQPQGAGILLVGVHFLTLEMGARILGLHHQGVGVYRPNDNPLLDWIQFRGRVRSNKAM HHCCCCCCCEEEHHHHHHHHHHCCHHEEEEECCCEEECCCCCCHHHHHHHHCHHCCCHHH LDRKDLRGMIRALKAGETIWYAPDHDYGRKNSVFVPFFAVNEACTTAGTRMLLRSAPNTV HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEE VVPFSPIRNDDFSGYTVKVSPAVDFSECSDELDTATKMNKVVETEILKEVSQYMWLHRRF EEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTRPQESDKSLYD CCCCCCCCCCCCC >Mature Secondary Structure TENKNIPPFELRFLHPKYWGLWLGLGLFKLILCLPYPVLVVLGKGIGKLFAKLGFGKRR CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCCHHH MRIARRNLELCFPDYSAERIQAILAKNIESVGMAIIETGMAWFWSDKRILKWSKIEGLEH HHHHHCCCEEECCCCCHHHHHHHHHHCHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHH LKNQPQGAGILLVGVHFLTLEMGARILGLHHQGVGVYRPNDNPLLDWIQFRGRVRSNKAM HHCCCCCCCEEEHHHHHHHHHHCCHHEEEEECCCEEECCCCCCHHHHHHHHCHHCCCHHH LDRKDLRGMIRALKAGETIWYAPDHDYGRKNSVFVPFFAVNEACTTAGTRMLLRSAPNTV HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEE VVPFSPIRNDDFSGYTVKVSPAVDFSECSDELDTATKMNKVVETEILKEVSQYMWLHRRF EEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTRPQESDKSLYD CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 7592970 [H]