Click here to switch to the map view.

The map label for this gene is yhjX [H]

Identifier: 126208374

GI number: 126208374

Start: 1040777

End: 1042315

Strand: Direct

Name: yhjX [H]

Synonym: APL_0898

Alternate gene names: 126208374

Gene position: 1040777-1042315 (Clockwise)

Preceding gene: 126208373

Following gene: 126208377

Centisome position: 45.76

GC content: 45.35

Gene sequence:

>1539_bases
ATGTCATTCTTAGATCGTGAAAAAACCATTGCGCCTTTGCAATTTAATCGTTGGTTAATTCCTCCCGCCGCCCTTGCCGT
ACATTTATCTATCGGACAAATCTACGCTTACTCGGTTTTCAATGCACCGCTCACTAAAGTTATCGGTATCACTCAATCCG
TAGCGGACGACTGGAAACTGACCACCGTCGGTTGGGTATTTAGTATCGCGCTTGCCGTATTAGGAGCTTCCGCCGCATTA
TTCGGTACATGGATGGAACGTGTCGGTCCTCGTAAAGCGATGTTCGTCGCAACCATTTGCTTTAGCTTAGGTTTTCTTGT
TGCGGCATTCGGCGTACATACCCATAATTTATGGCTGTTATATTTAGGTAACGGCGTACTCGGCGGCATCGGTTTAGGTC
TAGGTTATATCGGACCGGTTTCAACCTTAATGAAATGGTTCCCGGATAAACCGGGGATGGCGACCGGTTTAGCCATTATG
GGGTTCGGCGGCGGTGCAATGCTCGCTTCTCCAATTTCCGTGGCGTTAATGAACTTCTTCAGTAGCCCGACATCAGTAGG
GATTGTCGAAACCTTTATCGTATTAGGTATTTTCTATTTCATCTTTATGATGTTCGGCGTCTTCACTATTCGCCTACCGC
ATCCGGAATGGAAACCGAAAGGTTTTGTGGAAAGTAAACCTAAGAATAAATTGGTAAGCTCGCATAATGTCGGTGTGAAT
AAAGCGATGAAAACACCACAGTTCTGGCTACTGTTCTGGATTTTATGTCTAAATGTTACCGCCGGTATCGGGGTTCTCGG
TCAGGCGTCGGTAATGATTCAAGAATTATTCTCGGAAGTTTCCGTCGGTAAGCAAGCGGCAATCGGTACCCTAGCGGCAG
CCGGATTTGTAGGCTTACTCAGTCTGTTTAATATGGGCGGACGTTTCTTCTGGTCGAGTATTTCGGACAAAATCGGACGT
AAAAATTTATACTCTGTTTTCTTCTTACTCGGCTCTGTGCTTTACTTTATTATTCCTTCATTAGGCGAAAGCGGCAACAA
AGCATTATTTGTAATCGGTTTCTGTGTCATTATCTCGATGTACGGCGGTGGTTTCGCAGCAATTCCCGCTTATCTACGTG
ATTTATTCGGTACTTATCAAGTCGGTGCAATTCACGGACGAGTTCTACTTGCGTGGTCCACGGCTGCAGTCGTAGGTCCT
GTTTTAGTGAACTATATTCGCCAAATGCAAATTGATAGCGGCGTACCGGCGGCACAAGCGTACAGTATTACCATGTACAT
TATGGCGGCATTATTGATTGTCGGACTTATTTGTAATTTAAGCGTGAAAGCGGTACATGAAAAACATCATGAATTACCGC
TTAAAGAAGCGGCTCACAGTGCCGAGCCAAGCGATGAAACCGTGATTTCGGATACTTATCTGGTTGCCGAAGAAGTCGCT
CACGGCGGTTGTATGGTATGGTTACGTTGGATTATCGTAACTGTTCCGCTCGCTTACGGTGTTATTATGGTATTTGCTAA
AGTGGTTGAGCTTTTCTAA

Upstream 100 bases:

>100_bases
CTTTTTTACTGAATATTCTCTTACGCAAACGTTTGCGCAAATGATTTTTGCTGTTATAATTACGTTAAATTATTGTTAAT
AATCTCTAAATGGAGCATCC

Downstream 100 bases:

>100_bases
AGTAGTATTGCAAATTTTTTAGTAAATTTGACCGCTTGTCTAATATAAAACCCCGTATTCAAGTACGGGGTTTTTATCTA
TAGCTAATAACAAGCGGTTA

Product: putative oxalate/formate antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSFLDREKTIAPLQFNRWLIPPAALAVHLSIGQIYAYSVFNAPLTKVIGITQSVADDWKLTTVGWVFSIALAVLGASAAL
FGTWMERVGPRKAMFVATICFSLGFLVAAFGVHTHNLWLLYLGNGVLGGIGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
GFGGGAMLASPISVALMNFFSSPTSVGIVETFIVLGIFYFIFMMFGVFTIRLPHPEWKPKGFVESKPKNKLVSSHNVGVN
KAMKTPQFWLLFWILCLNVTAGIGVLGQASVMIQELFSEVSVGKQAAIGTLAAAGFVGLLSLFNMGGRFFWSSISDKIGR
KNLYSVFFLLGSVLYFIIPSLGESGNKALFVIGFCVIISMYGGGFAAIPAYLRDLFGTYQVGAIHGRVLLAWSTAAVVGP
VLVNYIRQMQIDSGVPAAQAYSITMYIMAALLIVGLICNLSVKAVHEKHHELPLKEAAHSAEPSDETVISDTYLVAEEVA
HGGCMVWLRWIIVTVPLAYGVIMVFAKVVELF

Sequences:

>Translated_512_residues
MSFLDREKTIAPLQFNRWLIPPAALAVHLSIGQIYAYSVFNAPLTKVIGITQSVADDWKLTTVGWVFSIALAVLGASAAL
FGTWMERVGPRKAMFVATICFSLGFLVAAFGVHTHNLWLLYLGNGVLGGIGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
GFGGGAMLASPISVALMNFFSSPTSVGIVETFIVLGIFYFIFMMFGVFTIRLPHPEWKPKGFVESKPKNKLVSSHNVGVN
KAMKTPQFWLLFWILCLNVTAGIGVLGQASVMIQELFSEVSVGKQAAIGTLAAAGFVGLLSLFNMGGRFFWSSISDKIGR
KNLYSVFFLLGSVLYFIIPSLGESGNKALFVIGFCVIISMYGGGFAAIPAYLRDLFGTYQVGAIHGRVLLAWSTAAVVGP
VLVNYIRQMQIDSGVPAAQAYSITMYIMAALLIVGLICNLSVKAVHEKHHELPLKEAAHSAEPSDETVISDTYLVAEEVA
HGGCMVWLRWIIVTVPLAYGVIMVFAKVVELF
>Mature_511_residues
SFLDREKTIAPLQFNRWLIPPAALAVHLSIGQIYAYSVFNAPLTKVIGITQSVADDWKLTTVGWVFSIALAVLGASAALF
GTWMERVGPRKAMFVATICFSLGFLVAAFGVHTHNLWLLYLGNGVLGGIGLGLGYIGPVSTLMKWFPDKPGMATGLAIMG
FGGGAMLASPISVALMNFFSSPTSVGIVETFIVLGIFYFIFMMFGVFTIRLPHPEWKPKGFVESKPKNKLVSSHNVGVNK
AMKTPQFWLLFWILCLNVTAGIGVLGQASVMIQELFSEVSVGKQAAIGTLAAAGFVGLLSLFNMGGRFFWSSISDKIGRK
NLYSVFFLLGSVLYFIIPSLGESGNKALFVIGFCVIISMYGGGFAAIPAYLRDLFGTYQVGAIHGRVLLAWSTAAVVGPV
LVNYIRQMQIDSGVPAAQAYSITMYIMAALLIVGLICNLSVKAVHEKHHELPLKEAAHSAEPSDETVISDTYLVAEEVAH
GGCMVWLRWIIVTVPLAYGVIMVFAKVVELF

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789969, Length=394, Percent_Identity=25.1269035532995, Blast_Score=123, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI115532488, Length=336, Percent_Identity=24.702380952381, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115532490, Length=336, Percent_Identity=24.702380952381, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004741 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 55338; Mature: 55207

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLDREKTIAPLQFNRWLIPPAALAVHLSIGQIYAYSVFNAPLTKVIGITQSVADDWKL
CCCCCCCCCCCCEECCCEECCHHHHHEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
TTVGWVFSIALAVLGASAALFGTWMERVGPRKAMFVATICFSLGFLVAAFGVHTHNLWLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
YLGNGVLGGIGLGLGYIGPVSTLMKWFPDKPGMATGLAIMGFGGGAMLASPISVALMNFF
EECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCEEEEECCCCHHHHHHHHHHHHHHH
SSPTSVGIVETFIVLGIFYFIFMMFGVFTIRLPHPEWKPKGFVESKPKNKLVSSHNVGVN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCH
KAMKTPQFWLLFWILCLNVTAGIGVLGQASVMIQELFSEVSVGKQAAIGTLAAAGFVGLL
HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SLFNMGGRFFWSSISDKIGRKNLYSVFFLLGSVLYFIIPSLGESGNKALFVIGFCVIISM
HHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHH
YGGGFAAIPAYLRDLFGTYQVGAIHGRVLLAWSTAAVVGPVLVNYIRQMQIDSGVPAAQA
HCCCHHHHHHHHHHHHCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHH
YSITMYIMAALLIVGLICNLSVKAVHEKHHELPLKEAAHSAEPSDETVISDTYLVAEEVA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCCCCEEHHHHHHHHHHC
HGGCMVWLRWIIVTVPLAYGVIMVFAKVVELF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SFLDREKTIAPLQFNRWLIPPAALAVHLSIGQIYAYSVFNAPLTKVIGITQSVADDWKL
CCCCCCCCCCCEECCCEECCHHHHHEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH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CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]