| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208340
Identifier: 126208340
GI number: 126208340
Start: 1003602
End: 1004054
Strand: Direct
Name: 126208340
Synonym: APL_0864
Alternate gene names: NA
Gene position: 1003602-1004054 (Clockwise)
Preceding gene: 126208339
Following gene: 126208342
Centisome position: 44.12
GC content: 39.07
Gene sequence:
>453_bases ATGAAAAAATTATTCGCTATCGCAATGTTAAGTTGTGCCAGTATTTCCGGCTACGCTGAAACCCCGGCGGCCAATATGCA ACCTATGCTAAAAGTACAAGTATTGGATATGAGTAATAAAGTCGGTAGAGCGGTTGAAAATAATCGACTTTCGTTAAGTA AAACACACCAGCTGTGTTGGGTCGTATTTAATATGCCATTTAAAGCAAATAACGAAGTGATCGAAATCTTTCAATCTCCT GCACCTTCAAAATTCGGTTCAGCTGCCGGCAGCGTAAGCACTTCCGCAGATCGCTTAACGCATAAAATTACCACTCGTAT GACGAGTTCCAATAATGAACGTCTAGATAACTGTTGGCGATTTGAAAAGAGTGACCCGAAAGGAAAATATAGTTTAACCA TTCAAGTTAATGACATCATTTTCCCACCTCAAACATTTGAAGTAACCAAATAA
Upstream 100 bases:
>100_bases AAGAACTGATGGCGCAAGGCGTAAGTAGCGGCGAAGCGATTCAAATTATTGCCAATCGCCTAAGAGAAGCACATCAAAAC AATACATCGGAGAACAATTC
Downstream 100 bases:
>100_bases AGCAAACGCCGCTATGCACGATGATAGTGGCGTTCTTTTTTATTTTAGTTTTTCGCTAAACGTTGTTCGATTTTTGCTAG ATTTTCTTCAAAATAGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKKLFAIAMLSCASISGYAETPAANMQPMLKVQVLDMSNKVGRAVENNRLSLSKTHQLCWVVFNMPFKANNEVIEIFQSP APSKFGSAAGSVSTSADRLTHKITTRMTSSNNERLDNCWRFEKSDPKGKYSLTIQVNDIIFPPQTFEVTK
Sequences:
>Translated_150_residues MKKLFAIAMLSCASISGYAETPAANMQPMLKVQVLDMSNKVGRAVENNRLSLSKTHQLCWVVFNMPFKANNEVIEIFQSP APSKFGSAAGSVSTSADRLTHKITTRMTSSNNERLDNCWRFEKSDPKGKYSLTIQVNDIIFPPQTFEVTK >Mature_150_residues MKKLFAIAMLSCASISGYAETPAANMQPMLKVQVLDMSNKVGRAVENNRLSLSKTHQLCWVVFNMPFKANNEVIEIFQSP APSKFGSAAGSVSTSADRLTHKITTRMTSSNNERLDNCWRFEKSDPKGKYSLTIQVNDIIFPPQTFEVTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16722; Mature: 16722
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFAIAMLSCASISGYAETPAANMQPMLKVQVLDMSNKVGRAVENNRLSLSKTHQLCW CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHCCHHCCCCEEEECCCEEEE VVFNMPFKANNEVIEIFQSPAPSKFGSAAGSVSTSADRLTHKITTRMTSSNNERLDNCWR EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHC FEKSDPKGKYSLTIQVNDIIFPPQTFEVTK CCCCCCCCEEEEEEEEEEEEECCCCEEECC >Mature Secondary Structure MKKLFAIAMLSCASISGYAETPAANMQPMLKVQVLDMSNKVGRAVENNRLSLSKTHQLCW CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHCCHHCCCCEEEECCCEEEE VVFNMPFKANNEVIEIFQSPAPSKFGSAAGSVSTSADRLTHKITTRMTSSNNERLDNCWR EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHC FEKSDPKGKYSLTIQVNDIIFPPQTFEVTK CCCCCCCCEEEEEEEEEEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]