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The map label for this gene is ycjX [C]

Identifier: 126208342

GI number: 126208342

Start: 1004961

End: 1006415

Strand: Direct

Name: ycjX [C]

Synonym: APL_0866

Alternate gene names: 126208342

Gene position: 1004961-1006415 (Clockwise)

Preceding gene: 126208340

Following gene: 126208343

Centisome position: 44.18

GC content: 42.61

Gene sequence:

>1455_bases
TTGTATAATTCAATTTATTTTAGCAATTTACAGCGTATTCGAGAAATGTTTAACAAAATCCAAAACAAACTGCACAAATT
TGTGCAACGCGGTTTAGACAATCATCTTCGCCTTGCCGTGACCGGTTTAAGCCGTAGCGGCAAAACTGCATTTATTACCA
GTTTTGTCGATCAGCTATTGCATATCAATAAAGATAGCCATGCGCACGTCAATTTATTTGGAGCAGCTCGCAACGGGCAA
ATCCTTTCGGTAAAGCGAGTTGAACAGGGCGACTTAACTATTCCCCGTTTTGAATACGATAAAAACCGCCAATGTTTGGA
AAATGATCCGCCTGTATGGGCACCTTCCACCACAGGTATCAGCGAAATTCGCTTAGCAATCCGTTACCAACGCCAAGACG
GTTTACTCAAACATTTAAAAGAAACCGGTACGCTCTACTTGGATATTTTCGATTATCCGGGCGAGTGGCTGTTGGACTTA
CCGCTACTCTCGCAATCTTTCAAGCAATGGTCGCAAGCTCAGCAATTAGTGCATAAAGGAAAACGTGCGGAACTGGCGCA
GCCTTGGTTACAAGCGGTCAAAAAATTAGATCTTTTTGCCAAAGCGGACGAAAACCAACTTGCCGAATTAAGCGAAATTT
ACACGGCTTATTTGTTGGAATGTAAACAAGCCGGTATGCAATATATTCAGCCGGGACGATTTGTATTACCGACTGAAAAT
TCAAAAGGTGCGCCGGTTTTTCAGTTCTTTCCGTTATTAGATTTAAGTGAAGCGGATTGGGAAAAACTCGAGAACTCGCC
GGCAAACAGTACGTTCCAAATGCTTAAAAAACGTTACAATCAATATCAGCAAAAGATTGTTAAACCGTTTTATGAAGACT
ATTTTTCACAATTCGACCGCCAAGTGATTCTTGCCGATTGTTTAACGCCGTTAAACCACGGCTTAGAGGCATTTTTAGAA
ATGAAAATCGGCTTGCAGCAATTGTTTAAACATTTTCATTATGGCAATCGTTCGTTATTTCATCGCCTGTTTTCGTCCAA
TATCGATAAGCTATTATTTATTGCGACCAAAGCGGATCATATCACCAGCGATCAACTACCGAATTTAGAAAGCCTGATGC
GTCAATTAGTGCAAGAAGGCGGACGACACGCCGCTTTTGACGGTATTGAAACCGGCTATCACGCTATTTCGGCAATTCGA
GCGACCGATCCGGTGGTGGTTACCCAAAACGGTACGCAAATTAAAGCGATTCGAGGTATTCGTTCAACCGATAAAAAACA
AGTAACGCTTTACCCCGGCACAGTACCAAGCCGCTTGCCTGATGCAAACTATTGGCAGTTTAACCGATTTGAGTTCGACC
AATTCGAGCCTAAACCACTCGCCTACGGCGAATCGATTCCGCATTTACGTATGGATGCGGTATTACAGTTCTTATTGGCA
GATATGTTGGAATAG

Upstream 100 bases:

>100_bases
CTGTTGTGTAAACCAATCCGCCAATGCTTCTACATTCTCCGCTTTTAGCATGATTTTTAGCTCGATTTCATTTTCCATTA
AGGTCATCCCGTTTATTTAG

Downstream 100 bases:

>100_bases
TCATCACAAGCGGTTATTTTTGCAAAATTTTTCGCAAATTTAACCGCTTGTCACTTGATTTTAAACGGTTACTGTTCACT
GTTAGGCGGCTTTGCGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MYNSIYFSNLQRIREMFNKIQNKLHKFVQRGLDNHLRLAVTGLSRSGKTAFITSFVDQLLHINKDSHAHVNLFGAARNGQ
ILSVKRVEQGDLTIPRFEYDKNRQCLENDPPVWAPSTTGISEIRLAIRYQRQDGLLKHLKETGTLYLDIFDYPGEWLLDL
PLLSQSFKQWSQAQQLVHKGKRAELAQPWLQAVKKLDLFAKADENQLAELSEIYTAYLLECKQAGMQYIQPGRFVLPTEN
SKGAPVFQFFPLLDLSEADWEKLENSPANSTFQMLKKRYNQYQQKIVKPFYEDYFSQFDRQVILADCLTPLNHGLEAFLE
MKIGLQQLFKHFHYGNRSLFHRLFSSNIDKLLFIATKADHITSDQLPNLESLMRQLVQEGGRHAAFDGIETGYHAISAIR
ATDPVVVTQNGTQIKAIRGIRSTDKKQVTLYPGTVPSRLPDANYWQFNRFEFDQFEPKPLAYGESIPHLRMDAVLQFLLA
DMLE

Sequences:

>Translated_484_residues
MYNSIYFSNLQRIREMFNKIQNKLHKFVQRGLDNHLRLAVTGLSRSGKTAFITSFVDQLLHINKDSHAHVNLFGAARNGQ
ILSVKRVEQGDLTIPRFEYDKNRQCLENDPPVWAPSTTGISEIRLAIRYQRQDGLLKHLKETGTLYLDIFDYPGEWLLDL
PLLSQSFKQWSQAQQLVHKGKRAELAQPWLQAVKKLDLFAKADENQLAELSEIYTAYLLECKQAGMQYIQPGRFVLPTEN
SKGAPVFQFFPLLDLSEADWEKLENSPANSTFQMLKKRYNQYQQKIVKPFYEDYFSQFDRQVILADCLTPLNHGLEAFLE
MKIGLQQLFKHFHYGNRSLFHRLFSSNIDKLLFIATKADHITSDQLPNLESLMRQLVQEGGRHAAFDGIETGYHAISAIR
ATDPVVVTQNGTQIKAIRGIRSTDKKQVTLYPGTVPSRLPDANYWQFNRFEFDQFEPKPLAYGESIPHLRMDAVLQFLLA
DMLE
>Mature_484_residues
MYNSIYFSNLQRIREMFNKIQNKLHKFVQRGLDNHLRLAVTGLSRSGKTAFITSFVDQLLHINKDSHAHVNLFGAARNGQ
ILSVKRVEQGDLTIPRFEYDKNRQCLENDPPVWAPSTTGISEIRLAIRYQRQDGLLKHLKETGTLYLDIFDYPGEWLLDL
PLLSQSFKQWSQAQQLVHKGKRAELAQPWLQAVKKLDLFAKADENQLAELSEIYTAYLLECKQAGMQYIQPGRFVLPTEN
SKGAPVFQFFPLLDLSEADWEKLENSPANSTFQMLKKRYNQYQQKIVKPFYEDYFSQFDRQVILADCLTPLNHGLEAFLE
MKIGLQQLFKHFHYGNRSLFHRLFSSNIDKLLFIATKADHITSDQLPNLESLMRQLVQEGGRHAAFDGIETGYHAISAIR
ATDPVVVTQNGTQIKAIRGIRSTDKKQVTLYPGTVPSRLPDANYWQFNRFEFDQFEPKPLAYGESIPHLRMDAVLQFLLA
DMLE

Specific function: Unknown

COG id: COG3106

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjX [H]

Homologues:

Organism=Escherichia coli, GI1787581, Length=467, Percent_Identity=47.96573875803, Blast_Score=466, Evalue=1e-132,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007413 [H]

Pfam domain/function: PF04317 DUF463 [H]

EC number: NA

Molecular weight: Translated: 55865; Mature: 55865

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00482 DIHYDROOROTASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNSIYFSNLQRIREMFNKIQNKLHKFVQRGLDNHLRLAVTGLSRSGKTAFITSFVDQLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
HINKDSHAHVNLFGAARNGQILSVKRVEQGDLTIPRFEYDKNRQCLENDPPVWAPSTTGI
HCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCH
SEIRLAIRYQRQDGLLKHLKETGTLYLDIFDYPGEWLLDLPLLSQSFKQWSQAQQLVHKG
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHCC
KRAELAQPWLQAVKKLDLFAKADENQLAELSEIYTAYLLECKQAGMQYIQPGRFVLPTEN
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
SKGAPVFQFFPLLDLSEADWEKLENSPANSTFQMLKKRYNQYQQKIVKPFYEDYFSQFDR
CCCCCHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVILADCLTPLNHGLEAFLEMKIGLQQLFKHFHYGNRSLFHRLFSSNIDKLLFIATKADH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCC
ITSDQLPNLESLMRQLVQEGGRHAAFDGIETGYHAISAIRATDPVVVTQNGTQIKAIRGI
CCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCC
RSTDKKQVTLYPGTVPSRLPDANYWQFNRFEFDQFEPKPLAYGESIPHLRMDAVLQFLLA
CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
DMLE
HHCC
>Mature Secondary Structure
MYNSIYFSNLQRIREMFNKIQNKLHKFVQRGLDNHLRLAVTGLSRSGKTAFITSFVDQLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
HINKDSHAHVNLFGAARNGQILSVKRVEQGDLTIPRFEYDKNRQCLENDPPVWAPSTTGI
HCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCH
SEIRLAIRYQRQDGLLKHLKETGTLYLDIFDYPGEWLLDLPLLSQSFKQWSQAQQLVHKG
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHCC
KRAELAQPWLQAVKKLDLFAKADENQLAELSEIYTAYLLECKQAGMQYIQPGRFVLPTEN
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
SKGAPVFQFFPLLDLSEADWEKLENSPANSTFQMLKKRYNQYQQKIVKPFYEDYFSQFDR
CCCCCHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVILADCLTPLNHGLEAFLEMKIGLQQLFKHFHYGNRSLFHRLFSSNIDKLLFIATKADH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCC
ITSDQLPNLESLMRQLVQEGGRHAAFDGIETGYHAISAIRATDPVVVTQNGTQIKAIRGI
CCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCC
RSTDKKQVTLYPGTVPSRLPDANYWQFNRFEFDQFEPKPLAYGESIPHLRMDAVLQFLLA
CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
DMLE
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]