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The map label for this gene is yohJ [C]

Identifier: 126208258

GI number: 126208258

Start: 896661

End: 897020

Strand: Reverse

Name: yohJ [C]

Synonym: APL_0780

Alternate gene names: 126208258

Gene position: 897020-896661 (Counterclockwise)

Preceding gene: 126208259

Following gene: 126208257

Centisome position: 39.44

GC content: 41.11

Gene sequence:

>360_bases
ATGATTGTTCGTATGCTCAGAATGCTGATTTCCTTGGCGTTGCTTTTCGCGATGTTATACGGCGGAAAGTTACTCGGCAT
TCTGATTCCGATTGGCATTTCCGAAAGTATTTGGGGAATGTTGTTACTTTTTACCTGCTTAGTTATCGGGGTCGTTAAAG
TAGAGTGGGTTACCCCTAGCGCAAGACCGCTTACCCGTTATATGACGATTTTCTTTATTCCAGTCTGTGCCGAAATTATC
GAACACATTGATATTCTTGAATCTCATCTGGCTTCATTTGTATTGGCAAATATATTCAGTACGTCCCTTTCCTTGATCGC
TATCGGATTATTCGCCCAATGGGTTTTTCATCAAAAATAG

Upstream 100 bases:

>100_bases
AGATAAAGTGATTCAATTTTTAAAAAATAAGTGAGAAAACAAGCGGTTGATTTTGCAAAATTTTTTGTAAATTTAACCGC
TTATTACGGAGGATACTTAT

Downstream 100 bases:

>100_bases
TAGGCGCTTATGATTTACCTTTATTCATGTTTAACCGTCTTAGCGTTTTTAATTGGGCAGCGGATCAGCCAAAAATTAAA
ATCTTCGGTGTTAAATCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MIVRMLRMLISLALLFAMLYGGKLLGILIPIGISESIWGMLLLFTCLVIGVVKVEWVTPSARPLTRYMTIFFIPVCAEII
EHIDILESHLASFVLANIFSTSLSLIAIGLFAQWVFHQK

Sequences:

>Translated_119_residues
MIVRMLRMLISLALLFAMLYGGKLLGILIPIGISESIWGMLLLFTCLVIGVVKVEWVTPSARPLTRYMTIFFIPVCAEII
EHIDILESHLASFVLANIFSTSLSLIAIGLFAQWVFHQK
>Mature_119_residues
MIVRMLRMLISLALLFAMLYGGKLLGILIPIGISESIWGMLLLFTCLVIGVVKVEWVTPSARPLTRYMTIFFIPVCAEII
EHIDILESHLASFVLANIFSTSLSLIAIGLFAQWVFHQK

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=113, Percent_Identity=29.2035398230088, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 13351; Mature: 13351

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRMLRMLISLALLFAMLYGGKLLGILIPIGISESIWGMLLLFTCLVIGVVKVEWVTPS
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCC
ARPLTRYMTIFFIPVCAEIIEHIDILESHLASFVLANIFSTSLSLIAIGLFAQWVFHQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVRMLRMLISLALLFAMLYGGKLLGILIPIGISESIWGMLLLFTCLVIGVVKVEWVTPS
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCC
ARPLTRYMTIFFIPVCAEIIEHIDILESHLASFVLANIFSTSLSLIAIGLFAQWVFHQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA