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The map label for this gene is yohK [H]

Identifier: 126208237

GI number: 126208237

Start: 869206

End: 869892

Strand: Direct

Name: yohK [H]

Synonym: APL_0759

Alternate gene names: 126208237

Gene position: 869206-869892 (Clockwise)

Preceding gene: 126208236

Following gene: 126208238

Centisome position: 38.22

GC content: 42.79

Gene sequence:

>687_bases
ATGATTTATCTTTATTCCGTGCTGACTGTCGTCGCCTTTTTTCTAAGTGTGAAGCTCAGCAAAAAATTAGCGATTTCATT
ACTCAATCCTTTTTTATTAACTTTATCGCTGTTATTAGCGATCTTAGTCATTTTTCAAATTCCGTATAAAGACTATCAGC
AGGGTACTTCTCCGCTCAGCCATTTCTTAGGCTTAGCGATTGTTGCGCTTGCGATCCCGCTTTACGAACAATTTCCACAA
ATCCGCCGCCGTTGGAAAGCGATCAGTTTTATTTTATTGCTCGGCACTGTTGTTTCGATATGCAGCGGAATGTTATTGGC
ACTATTATTCGGCGGTACAAAAGATATTGTTGCCGCACTGATGCCTAAATCGGTAACCATGCCGCTTGCGTTAGTGATTG
CCGGCGAAATCGGCGGCGAGTTTGCTTTAAGTGCCGTCGGCGTAATGGTCGCGGGTTTATTCGGTTCAATATTAGGCGTA
CCGATTCTGAAATTGGCTCGTATTACTAACCCGCAAGCAATCGGTATGAGTTTAGGTATTGCATCTCACGCACTTGGTAC
GGCTCGTTGTATGGAACTCAATACCAAATCAGCGAGTTATAGTTCGTTAGCTTTAGTGATCTGCGGTTTGCTTTCTTCAT
TTATTGCACCGCTGATTTTTCAGTTAGCGGTAAAATGGTTTATGTGA

Upstream 100 bases:

>100_bases
TCTCCTCGCTAATTATTTCCAATATCCTCAGCACAATAATTACCATTGTTGTAGTCGGTTGGGCGGCACAGCGTTTATTC
AAACATTCGGGAGAGGAACA

Downstream 100 bases:

>100_bases
TTTTTTATAACTTGAGAGGATATGATGGCGACTTATATTGTTGGCGATTTACACGGCTGTTTTGATGAGTTACAACTGCT
GCTCAAACAAGTTAATTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIYLYSVLTVVAFFLSVKLSKKLAISLLNPFLLTLSLLLAILVIFQIPYKDYQQGTSPLSHFLGLAIVALAIPLYEQFPQ
IRRRWKAISFILLLGTVVSICSGMLLALLFGGTKDIVAALMPKSVTMPLALVIAGEIGGEFALSAVGVMVAGLFGSILGV
PILKLARITNPQAIGMSLGIASHALGTARCMELNTKSASYSSLALVICGLLSSFIAPLIFQLAVKWFM

Sequences:

>Translated_228_residues
MIYLYSVLTVVAFFLSVKLSKKLAISLLNPFLLTLSLLLAILVIFQIPYKDYQQGTSPLSHFLGLAIVALAIPLYEQFPQ
IRRRWKAISFILLLGTVVSICSGMLLALLFGGTKDIVAALMPKSVTMPLALVIAGEIGGEFALSAVGVMVAGLFGSILGV
PILKLARITNPQAIGMSLGIASHALGTARCMELNTKSASYSSLALVICGLLSSFIAPLIFQLAVKWFM
>Mature_228_residues
MIYLYSVLTVVAFFLSVKLSKKLAISLLNPFLLTLSLLLAILVIFQIPYKDYQQGTSPLSHFLGLAIVALAIPLYEQFPQ
IRRRWKAISFILLLGTVVSICSGMLLALLFGGTKDIVAALMPKSVTMPLALVIAGEIGGEFALSAVGVMVAGLFGSILGV
PILKLARITNPQAIGMSLGIASHALGTARCMELNTKSASYSSLALVICGLLSSFIAPLIFQLAVKWFM

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=215, Percent_Identity=44.6511627906977, Blast_Score=187, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24391; Mature: 24391

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYLYSVLTVVAFFLSVKLSKKLAISLLNPFLLTLSLLLAILVIFQIPYKDYQQGTSPLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH
HFLGLAIVALAIPLYEQFPQIRRRWKAISFILLLGTVVSICSGMLLALLFGGTKDIVAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MPKSVTMPLALVIAGEIGGEFALSAVGVMVAGLFGSILGVPILKLARITNPQAIGMSLGI
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ASHALGTARCMELNTKSASYSSLALVICGLLSSFIAPLIFQLAVKWFM
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIYLYSVLTVVAFFLSVKLSKKLAISLLNPFLLTLSLLLAILVIFQIPYKDYQQGTSPLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHH
HFLGLAIVALAIPLYEQFPQIRRRWKAISFILLLGTVVSICSGMLLALLFGGTKDIVAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MPKSVTMPLALVIAGEIGGEFALSAVGVMVAGLFGSILGVPILKLARITNPQAIGMSLGI
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ASHALGTARCMELNTKSASYSSLALVICGLLSSFIAPLIFQLAVKWFM
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]