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The map label for this gene is yohJ [C]

Identifier: 126208236

GI number: 126208236

Start: 868838

End: 869209

Strand: Direct

Name: yohJ [C]

Synonym: APL_0758

Alternate gene names: 126208236

Gene position: 868838-869209 (Clockwise)

Preceding gene: 126208235

Following gene: 126208237

Centisome position: 38.2

GC content: 41.13

Gene sequence:

>372_bases
ATGCAAAAGAACATTATCGGCTTTGCGCTTTCTTTAGCGATTTTATGGGCAATGCTTTATCTCGGCAAAGGGTTAAACAC
ACTCATTCCTATCGGTATTCCGGACAGTATTTGGGGCTTACTTGTCTTATTTGTTACGCTGATTACAGGCTTAATCAAAT
TAGAATGGGTGTTACCGACCGGACGTTTCCTAAACCGATATATGCCGCTCGTTTTTCTACCGATTTGCGTAGGTATGATT
GAATACGGCGAAATTTTAGTTCGCTATTTCTCCTCGCTAATTATTTCCAATATCCTCAGCACAATAATTACCATTGTTGT
AGTCGGTTGGGCGGCACAGCGTTTATTCAAACATTCGGGAGAGGAACAATGA

Upstream 100 bases:

>100_bases
GTTCGATTGTGGGGAACATTATCTAATCGGCAAGCGGTCAAATTTCGAGAATTTTTTGCAAAATTTCCTACAAATTTGAC
CGCTTATCACATGAGGCTTT

Downstream 100 bases:

>100_bases
TTTATCTTTATTCCGTGCTGACTGTCGTCGCCTTTTTTCTAAGTGTGAAGCTCAGCAAAAAATTAGCGATTTCATTACTC
AATCCTTTTTTATTAACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MQKNIIGFALSLAILWAMLYLGKGLNTLIPIGIPDSIWGLLVLFVTLITGLIKLEWVLPTGRFLNRYMPLVFLPICVGMI
EYGEILVRYFSSLIISNILSTIITIVVVGWAAQRLFKHSGEEQ

Sequences:

>Translated_123_residues
MQKNIIGFALSLAILWAMLYLGKGLNTLIPIGIPDSIWGLLVLFVTLITGLIKLEWVLPTGRFLNRYMPLVFLPICVGMI
EYGEILVRYFSSLIISNILSTIITIVVVGWAAQRLFKHSGEEQ
>Mature_123_residues
MQKNIIGFALSLAILWAMLYLGKGLNTLIPIGIPDSIWGLLVLFVTLITGLIKLEWVLPTGRFLNRYMPLVFLPICVGMI
EYGEILVRYFSSLIISNILSTIITIVVVGWAAQRLFKHSGEEQ

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=119, Percent_Identity=34.453781512605, Blast_Score=76, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 13793; Mature: 13793

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNIIGFALSLAILWAMLYLGKGLNTLIPIGIPDSIWGLLVLFVTLITGLIKLEWVLPT
CCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GRFLNRYMPLVFLPICVGMIEYGEILVRYFSSLIISNILSTIITIVVVGWAAQRLFKHSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EEQ
CCC
>Mature Secondary Structure
MQKNIIGFALSLAILWAMLYLGKGLNTLIPIGIPDSIWGLLVLFVTLITGLIKLEWVLPT
CCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GRFLNRYMPLVFLPICVGMIEYGEILVRYFSSLIISNILSTIITIVVVGWAAQRLFKHSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EEQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA