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The map label for this gene is ybfF [C]

Identifier: 126208231

GI number: 126208231

Start: 863424

End: 864209

Strand: Direct

Name: ybfF [C]

Synonym: APL_0753

Alternate gene names: 126208231

Gene position: 863424-864209 (Clockwise)

Preceding gene: 126208214

Following gene: 126208232

Centisome position: 37.96

GC content: 43.0

Gene sequence:

>786_bases
ATGACAGAAAATACTTATCTTAATTATCAATTCCAACCGGCAACCGAAAAAGCCGACGCACAAACCATGGTTTTCCTACA
CGGATTATTCGGCGATATTAATAATTTGGGCATTATTGCCCGCCAATTTAGTGAGCAATTTAATATCTTACGCGTGGATC
TACGCAACCACGGGCAATCTTTCCATTCGGATGAGATGAATTACCACTTAATGGCGCAGGATCTACAAGCTTTATTACAG
CATCTACATTTAACGGATAATATTGTGATCGGTCATTCAATGGGCGGCAAAACCGCAATGACATTGGCAAATATCGCTCC
CGATCTCATCGAAAAATTAGTCGTAATTGATATTGCGCCGACCGCCAACCCGACCCATCGACATAACAATAATTTTGCCG
GCTTATTCGCCGTTAAAGCCGCTCGACCGGCAACACGCCAACAAGCGAAAACCGTGCTAGCGCAATATGTGAAAGACGAA
GGCGAACAACAATTTATGTTAAAAGCATTCGACCCGCAAAAACCGGATTATTTCCGCTTCAATTTAACCTCAATTAAAGC
AAACTATGAAAATTTGATGGGCTGGAACGAGGTCTTTTTTGATAAACCGACTTTATTTATCAAAGGCGGTGCGTCCGATT
ATATTCAAGCGAAAGACACCGACACGATTCTGAAGCAATTTCCACAGGCGAAATCGTTTGTCGTCGCCAATGCGCAACAC
TGGGTACACGCGGAAAAACCGGAAACGGTCGCTCGCGCCATTCAAAAATTTTTAGACAAGGAATAA

Upstream 100 bases:

>100_bases
TTGATTTACTTGATTAGAAAAAAATTCTAGGCATTATAATACAGATTCAAGATCTTTTTACAGGATCTTAACCAAACATT
TGAATAAAAAATAACAACTT

Downstream 100 bases:

>100_bases
TAACATTATGAATAAAGATACGATTTTTTCCGCACCGATTGAGAAACTCGGTGACTTTACCTTTGACGAATCGGTTGCCG
AAGTGTTTCCCGATATGATC

Product: putative esterase/lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MTENTYLNYQFQPATEKADAQTMVFLHGLFGDINNLGIIARQFSEQFNILRVDLRNHGQSFHSDEMNYHLMAQDLQALLQ
HLHLTDNIVIGHSMGGKTAMTLANIAPDLIEKLVVIDIAPTANPTHRHNNNFAGLFAVKAARPATRQQAKTVLAQYVKDE
GEQQFMLKAFDPQKPDYFRFNLTSIKANYENLMGWNEVFFDKPTLFIKGGASDYIQAKDTDTILKQFPQAKSFVVANAQH
WVHAEKPETVARAIQKFLDKE

Sequences:

>Translated_261_residues
MTENTYLNYQFQPATEKADAQTMVFLHGLFGDINNLGIIARQFSEQFNILRVDLRNHGQSFHSDEMNYHLMAQDLQALLQ
HLHLTDNIVIGHSMGGKTAMTLANIAPDLIEKLVVIDIAPTANPTHRHNNNFAGLFAVKAARPATRQQAKTVLAQYVKDE
GEQQFMLKAFDPQKPDYFRFNLTSIKANYENLMGWNEVFFDKPTLFIKGGASDYIQAKDTDTILKQFPQAKSFVVANAQH
WVHAEKPETVARAIQKFLDKE
>Mature_260_residues
TENTYLNYQFQPATEKADAQTMVFLHGLFGDINNLGIIARQFSEQFNILRVDLRNHGQSFHSDEMNYHLMAQDLQALLQH
LHLTDNIVIGHSMGGKTAMTLANIAPDLIEKLVVIDIAPTANPTHRHNNNFAGLFAVKAARPATRQQAKTVLAQYVKDEG
EQQFMLKAFDPQKPDYFRFNLTSIKANYENLMGWNEVFFDKPTLFIKGGASDYIQAKDTDTILKQFPQAKSFVVANAQHW
VHAEKPETVARAIQKFLDKE

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200008, Length=252, Percent_Identity=35.7142857142857, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI23200012, Length=252, Percent_Identity=35.7142857142857, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI223941839, Length=246, Percent_Identity=32.9268292682927, Blast_Score=118, Evalue=4e-27,
Organism=Escherichia coli, GI1786902, Length=254, Percent_Identity=43.7007874015748, Blast_Score=214, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI17508535, Length=272, Percent_Identity=30.5147058823529, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17507063, Length=256, Percent_Identity=25.78125, Blast_Score=80, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6321468, Length=264, Percent_Identity=30.6818181818182, Blast_Score=99, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24640348, Length=256, Percent_Identity=27.734375, Blast_Score=97, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24646055, Length=276, Percent_Identity=22.463768115942, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012908 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07819 PGAP1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 29638; Mature: 29507

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENTYLNYQFQPATEKADAQTMVFLHGLFGDINNLGIIARQFSEQFNILRVDLRNHGQS
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEHHCCCC
FHSDEMNYHLMAQDLQALLQHLHLTDNIVIGHSMGGKTAMTLANIAPDLIEKLVVIDIAP
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCHHHHHHEEEEEECC
TANPTHRHNNNFAGLFAVKAARPATRQQAKTVLAQYVKDEGEQQFMLKAFDPQKPDYFRF
CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEE
NLTSIKANYENLMGWNEVFFDKPTLFIKGGASDYIQAKDTDTILKQFPQAKSFVVANAQH
EEEEEECCHHHHCCCHHHHCCCCEEEEECCCCCCEECCCHHHHHHHCCCCCCEEEECCHH
WVHAEKPETVARAIQKFLDKE
CEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TENTYLNYQFQPATEKADAQTMVFLHGLFGDINNLGIIARQFSEQFNILRVDLRNHGQS
CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEHHCCCC
FHSDEMNYHLMAQDLQALLQHLHLTDNIVIGHSMGGKTAMTLANIAPDLIEKLVVIDIAP
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCHHHHHHEEEEEECC
TANPTHRHNNNFAGLFAVKAARPATRQQAKTVLAQYVKDEGEQQFMLKAFDPQKPDYFRF
CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEE
NLTSIKANYENLMGWNEVFFDKPTLFIKGGASDYIQAKDTDTILKQFPQAKSFVVANAQH
EEEEEECCHHHHCCCHHHHCCCCEEEEECCCCCCEECCCHHHHHHHCCCCCCEEEECCHH
WVHAEKPETVARAIQKFLDKE
CEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]