| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yhbP [C]
Identifier: 126208214
GI number: 126208214
Start: 841369
End: 841818
Strand: Direct
Name: yhbP [C]
Synonym: APL_0734
Alternate gene names: 126208214
Gene position: 841369-841818 (Clockwise)
Preceding gene: 126208213
Following gene: 126208231
Centisome position: 36.99
GC content: 42.22
Gene sequence:
>450_bases ATGATACAGAAACTTCCCTCCCATATCAGCCGTTTTATCCGACAAAATCACGTCGTAAGTTTTGCCGTCTATGGCGCAAA CGACTTTTGGGCGGCAAACTGTTTTTATGCTTTCGATAGCGAACAAGTTCGGTTAATCATTCTGACTGATAAAAACACGC GCCACGGTCTGTTGATGCAAGAAAACGCACATATTGTAGGCACAATTGCCGCTCAAGTTGAAACCCTCACTGAAATTGAA GGTATTCAATTCTCGGCGTATTGCACCCGTTTGACCGATTATACGGCATGCCAAGAGGCTTTAGATTGCTATTATGCTCG CCATCCAATCGCCCGCTTAAAATCGAGTGATATATGGGAAATTCGCTTGGATATGATAAAACATACCGGGAATAAATTAG CTTTCGCAAAGAAAACCATTTGGGAAAGAGAAAAAGTCTCGTTTTCCTAA
Upstream 100 bases:
>100_bases GCACTCATTTTAGTAATGCCGTTCTCTTATTTTTGGCAAATGTTTGTCGCTTAATAGATACAACATCCCACTGTTACGGT GGGATATTTTAAAAGAATAT
Downstream 100 bases:
>100_bases GAAAACAAGCGGTCAGATTTCACTCATTTTTTGTAAAATTTTTTCCAAATTTCACCGTTTGTATAGGGATGATTAACCGC CGGCAAGTTTTACCTTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MIQKLPSHISRFIRQNHVVSFAVYGANDFWAANCFYAFDSEQVRLIILTDKNTRHGLLMQENAHIVGTIAAQVETLTEIE GIQFSAYCTRLTDYTACQEALDCYYARHPIARLKSSDIWEIRLDMIKHTGNKLAFAKKTIWEREKVSFS
Sequences:
>Translated_149_residues MIQKLPSHISRFIRQNHVVSFAVYGANDFWAANCFYAFDSEQVRLIILTDKNTRHGLLMQENAHIVGTIAAQVETLTEIE GIQFSAYCTRLTDYTACQEALDCYYARHPIARLKSSDIWEIRLDMIKHTGNKLAFAKKTIWEREKVSFS >Mature_149_residues MIQKLPSHISRFIRQNHVVSFAVYGANDFWAANCFYAFDSEQVRLIILTDKNTRHGLLMQENAHIVGTIAAQVETLTEIE GIQFSAYCTRLTDYTACQEALDCYYARHPIARLKSSDIWEIRLDMIKHTGNKLAFAKKTIWEREKVSFS
Specific function: Unknown
COG id: COG3787
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0306 family [H]
Homologues:
Organism=Escherichia coli, GI1789544, Length=136, Percent_Identity=41.1764705882353, Blast_Score=113, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011194 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17206; Mature: 17206
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKLPSHISRFIRQNHVVSFAVYGANDFWAANCFYAFDSEQVRLIILTDKNTRHGLLMQ CCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEEEECCCCEEEEEEECCCCCCCEEEE ENAHIVGTIAAQVETLTEIEGIQFSAYCTRLTDYTACQEALDCYYARHPIARLKSSDIWE CCCEEEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHH IRLDMIKHTGNKLAFAKKTIWEREKVSFS HHHHHHHCCCCEEEHHHHHHHCCCCCCCC >Mature Secondary Structure MIQKLPSHISRFIRQNHVVSFAVYGANDFWAANCFYAFDSEQVRLIILTDKNTRHGLLMQ CCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEEEECCCCEEEEEEECCCCCCCEEEE ENAHIVGTIAAQVETLTEIEGIQFSAYCTRLTDYTACQEALDCYYARHPIARLKSSDIWE CCCEEEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHH IRLDMIKHTGNKLAFAKKTIWEREKVSFS HHHHHHHCCCCEEEHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA