| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is 126208202
Identifier: 126208202
GI number: 126208202
Start: 830997
End: 831512
Strand: Reverse
Name: 126208202
Synonym: APL_0722
Alternate gene names: NA
Gene position: 831512-830997 (Counterclockwise)
Preceding gene: 126208203
Following gene: 126208201
Centisome position: 36.56
GC content: 43.6
Gene sequence:
>516_bases ATGCAACAACTTGAACCGCAACAATTCGCCAGCTGGGCGGAACCGATAGATATGTTGTACGCTTGCCACAGCAAGGTAAA ACGTTTCTGCAAGCAGTTACAAATTTTACCTGAGTATTTGGCAAAAAACGGGGTAAATCAGGCAGTTAAAAACGATGTGC AGCAAATTATCAATTATTTTAATCTTTCCGCACCGTTACATCACGAAGATGAAGAATGTGACTTTTTCCCCGCATTAATT CAAGTGCAACCGCAGGCTCAAGCCGATATTGATGAACTGGAGAGCCAACATGAGTCGTTACACCAAAATTGGGCATTACT GTCCGCTCAATTAGAAGCATTAGTGACAGGAGAGCGTAATGATGTGGATCCGCTGCTTATCGCTCGCTTTATTGCCGGAT ACGATGTTCATATTGCAATTGAAGAGCCGTTATTTGAACTCGGTCGGACCCATTTGGCGCAATCCGAATTAGAGCGTATG GGTAAAATTATGGCGGAACGTCGTAAAGTCGCTTAA
Upstream 100 bases:
>100_bases GCCGTTACAATCGGAAGTGAATAAATAATTCCAAATTTTTTATGGCACAAGTTTAGGCTTGTGCCTTTTTATCAAAGGGT GATTAGATAGAGAGGTGATT
Downstream 100 bases:
>100_bases TAGACAATGATAAAAACGTATCAATTGGATTTACGTCAATACCGCTGCCCGTTACCGCTATTAATGACTAAAAAAGCATT AAACCAACTAGCGTTAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MQQLEPQQFASWAEPIDMLYACHSKVKRFCKQLQILPEYLAKNGVNQAVKNDVQQIINYFNLSAPLHHEDEECDFFPALI QVQPQAQADIDELESQHESLHQNWALLSAQLEALVTGERNDVDPLLIARFIAGYDVHIAIEEPLFELGRTHLAQSELERM GKIMAERRKVA
Sequences:
>Translated_171_residues MQQLEPQQFASWAEPIDMLYACHSKVKRFCKQLQILPEYLAKNGVNQAVKNDVQQIINYFNLSAPLHHEDEECDFFPALI QVQPQAQADIDELESQHESLHQNWALLSAQLEALVTGERNDVDPLLIARFIAGYDVHIAIEEPLFELGRTHLAQSELERM GKIMAERRKVA >Mature_171_residues MQQLEPQQFASWAEPIDMLYACHSKVKRFCKQLQILPEYLAKNGVNQAVKNDVQQIINYFNLSAPLHHEDEECDFFPALI QVQPQAQADIDELESQHESLHQNWALLSAQLEALVTGERNDVDPLLIARFIAGYDVHIAIEEPLFELGRTHLAQSELERM GKIMAERRKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012312 [H]
Pfam domain/function: PF01814 Hemerythrin [H]
EC number: NA
Molecular weight: Translated: 19620; Mature: 19620
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLEPQQFASWAEPIDMLYACHSKVKRFCKQLQILPEYLAKNGVNQAVKNDVQQIINYF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NLSAPLHHEDEECDFFPALIQVQPQAQADIDELESQHESLHQNWALLSAQLEALVTGERN CCCCCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVDPLLIARFIAGYDVHIAIEEPLFELGRTHLAQSELERMGKIMAERRKVA CCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQQLEPQQFASWAEPIDMLYACHSKVKRFCKQLQILPEYLAKNGVNQAVKNDVQQIINYF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NLSAPLHHEDEECDFFPALIQVQPQAQADIDELESQHESLHQNWALLSAQLEALVTGERN CCCCCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVDPLLIARFIAGYDVHIAIEEPLFELGRTHLAQSELERMGKIMAERRKVA CCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]