| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is dld [H]
Identifier: 126208167
GI number: 126208167
Start: 785117
End: 786808
Strand: Direct
Name: dld [H]
Synonym: APL_0687
Alternate gene names: 126208167
Gene position: 785117-786808 (Clockwise)
Preceding gene: 126208159
Following gene: 126208170
Centisome position: 34.52
GC content: 42.49
Gene sequence:
>1692_bases ATGTCTGCACATTTACTGATTCCACAACTGACCGAAATCGTTGGTTCTCAACACATTATTACCGATGCGGCTAAAAGCGA AGCTTATCGTAGCGGCTATCGTTTCGGGACGGGAAAAGCACTTGCCGTGGTGCGCCCTGCAACATTATTAGAATATTGGC GAGTTTTAAAAGCCTGTGTACGTCACGATGTCATTGTGATTAACCAAGCTGCCAATACCGGCTTGACTGGTGGCTCGACC CCGAACGGCAATGATTACGACCGAGAAATTGTCATTATCAATACGATGAGAATGGACGGTATCCAGTTGATCAACAATGC GGAACAAGTGGTCTGTTTACCGGGTTCGACACTCAATGAGTTAGAAATTAAACTTAAACCGCACGGACGTGAACCTCACT CTGTTATCGGCTCATCTTGTATCGGTGCTTCGGTGATTGGTGGTGTGTGTAATAACTCCGGCGGTGCATTGGTACAACGA GGCCCGGCTTATACCGAAATGGCGTTATTTGCTCAACTAAACGAACAAGGCGAGCTTGAGCTTAAAAATCACTTAGGCAT TGATTTAGGCGAAACGCCGGAAGAAATTTTAGAAAATCTGCAAAATAATCGCTATCAACGCAAAGATATTCAACTAGATT GCGGTAAAGGTCATGATCATACTTATTGTGATCACGTGCGTAAAATTGATGAAGACTCCCCTGCTCGCTTTAATGCCGAT CCGAATCGCCATTATGAAGCCTCCGGTAGTGCCGGTAAATTAGCCGTGTTTGCTGTGCGTTTAGATACTTTCCCGTTAGA AAAGCAAACCGCCGTGTTCTATATAGGTACAAATCACACCGCTACCCTAAACGATTTACGCCGTCATATGCTTGCCAACT TTAAGCAATTACCGATTTCCGGTGAATATATTCATCGTGATGCGTTCGATATTGCCGCGCGTTACGGTAAAGATACGTTC TGGGTCATTAAAAAATTCGGTACGCACTGGTTACCGAAATTATTCGCCTTAAAAGCCAATGCCGACCGTATTGCGAAAAA ATTCTCGTTCTTACCTCATCATTTAAGCGATAAATTTATGCAGACATTATCTAAACGTTTACCGGAACATTTACCGCAAA GTTTATGGCAATATCGTGAAAAGTATGAACACCATTTAATTCTGAAAATGGGCGGAACCGGCGTTGCCGAGGCTCGTGAA TATTTAAAACAATATTTTTCCGAAAGCGAGAAAGGCGGTTATTTCGAATGTAATGCGGTGGAAACACAAGCGGCAATGTT ACACCGTTTTGCAGTAGCCTCTGCCGCAATTCGTTATCGAGCTACACACGAAAATGAGGTGGAAGATATTGTTGCATTAG ATATTGCATTACGTCGTAATGATCAAGATTGGTTTGAGGTCTTACCGCCTGAAATCGATCAGAAAATCCTGCATAAACTC TATTACGGACATTTTATGTGCCACGTATTCCACCAAGACTACATTGTGAAAAAAGGCGTAGATTGTGTTGCGTTAGAACA CGAAATGTTAGCCTTATTAGATAAACGTGGTGCACAATACCCTGCGGAACATAACGTCGGGCATTTATATGAAGCAAAAC CGACGTTACGCAAATTCTATAAAGATTTAGATCCAACCAATAGCTTTAACGTAGGTATCGGACAAACTTCTAAGAAAAAA TACTGGAAATAG
Upstream 100 bases:
>100_bases TTCTCCTTAAAAAAATAATGCTAAATATAGCATAAAATTTATTACACATTTAGCCATCTTTTGTTATGATTTTGTTAATT TTATACTAAGGAGGCTTATC
Downstream 100 bases:
>100_bases TATAATAAAGCTGTCTATTTTTGCTTTTCCTTTGCAAGAAAATTAAAAAAATAACCGCTTGTCATTCAGTTAATATAAAT ATAAAAACGCACTAAAGCCC
Product: D-lactate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MSAHLLIPQLTEIVGSQHIITDAAKSEAYRSGYRFGTGKALAVVRPATLLEYWRVLKACVRHDVIVINQAANTGLTGGST PNGNDYDREIVIINTMRMDGIQLINNAEQVVCLPGSTLNELEIKLKPHGREPHSVIGSSCIGASVIGGVCNNSGGALVQR GPAYTEMALFAQLNEQGELELKNHLGIDLGETPEEILENLQNNRYQRKDIQLDCGKGHDHTYCDHVRKIDEDSPARFNAD PNRHYEASGSAGKLAVFAVRLDTFPLEKQTAVFYIGTNHTATLNDLRRHMLANFKQLPISGEYIHRDAFDIAARYGKDTF WVIKKFGTHWLPKLFALKANADRIAKKFSFLPHHLSDKFMQTLSKRLPEHLPQSLWQYREKYEHHLILKMGGTGVAEARE YLKQYFSESEKGGYFECNAVETQAAMLHRFAVASAAIRYRATHENEVEDIVALDIALRRNDQDWFEVLPPEIDQKILHKL YYGHFMCHVFHQDYIVKKGVDCVALEHEMLALLDKRGAQYPAEHNVGHLYEAKPTLRKFYKDLDPTNSFNVGIGQTSKKK YWK
Sequences:
>Translated_563_residues MSAHLLIPQLTEIVGSQHIITDAAKSEAYRSGYRFGTGKALAVVRPATLLEYWRVLKACVRHDVIVINQAANTGLTGGST PNGNDYDREIVIINTMRMDGIQLINNAEQVVCLPGSTLNELEIKLKPHGREPHSVIGSSCIGASVIGGVCNNSGGALVQR GPAYTEMALFAQLNEQGELELKNHLGIDLGETPEEILENLQNNRYQRKDIQLDCGKGHDHTYCDHVRKIDEDSPARFNAD PNRHYEASGSAGKLAVFAVRLDTFPLEKQTAVFYIGTNHTATLNDLRRHMLANFKQLPISGEYIHRDAFDIAARYGKDTF WVIKKFGTHWLPKLFALKANADRIAKKFSFLPHHLSDKFMQTLSKRLPEHLPQSLWQYREKYEHHLILKMGGTGVAEARE YLKQYFSESEKGGYFECNAVETQAAMLHRFAVASAAIRYRATHENEVEDIVALDIALRRNDQDWFEVLPPEIDQKILHKL YYGHFMCHVFHQDYIVKKGVDCVALEHEMLALLDKRGAQYPAEHNVGHLYEAKPTLRKFYKDLDPTNSFNVGIGQTSKKK YWK >Mature_562_residues SAHLLIPQLTEIVGSQHIITDAAKSEAYRSGYRFGTGKALAVVRPATLLEYWRVLKACVRHDVIVINQAANTGLTGGSTP NGNDYDREIVIINTMRMDGIQLINNAEQVVCLPGSTLNELEIKLKPHGREPHSVIGSSCIGASVIGGVCNNSGGALVQRG PAYTEMALFAQLNEQGELELKNHLGIDLGETPEEILENLQNNRYQRKDIQLDCGKGHDHTYCDHVRKIDEDSPARFNADP NRHYEASGSAGKLAVFAVRLDTFPLEKQTAVFYIGTNHTATLNDLRRHMLANFKQLPISGEYIHRDAFDIAARYGKDTFW VIKKFGTHWLPKLFALKANADRIAKKFSFLPHHLSDKFMQTLSKRLPEHLPQSLWQYREKYEHHLILKMGGTGVAEAREY LKQYFSESEKGGYFECNAVETQAAMLHRFAVASAAIRYRATHENEVEDIVALDIALRRNDQDWFEVLPPEIDQKILHKLY YGHFMCHVFHQDYIVKKGVDCVALEHEMLALLDKRGAQYPAEHNVGHLYEAKPTLRKFYKDLDPTNSFNVGIGQTSKKKY WK
Specific function: First component of the membrane-bound D-lactate oxidase, which is believed to play an important role in the energization of the active transport of a variety of sugars and amino acids [H]
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788454, Length=558, Percent_Identity=61.4695340501792, Blast_Score=722, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016172 - InterPro: IPR016173 - InterPro: IPR012256 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016164 - InterPro: IPR016168 - InterPro: IPR015409 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF09330 Lact-deh-memb [H]
EC number: =1.1.1.28 [H]
Molecular weight: Translated: 63739; Mature: 63608
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHLLIPQLTEIVGSQHIITDAAKSEAYRSGYRFGTGKALAVVRPATLLEYWRVLKACV CCCCEEHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHH RHDVIVINQAANTGLTGGSTPNGNDYDREIVIINTMRMDGIQLINNAEQVVCLPGSTLNE HCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCCCEEEECCCCCCCE LEIKLKPHGREPHSVIGSSCIGASVIGGVCNNSGGALVQRGPAYTEMALFAQLNEQGELE EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCEE LKNHLGIDLGETPEEILENLQNNRYQRKDIQLDCGKGHDHTYCDHVRKIDEDSPARFNAD EHHCCCCCCCCCHHHHHHHHHCCCEECCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCC PNRHYEASGSAGKLAVFAVRLDTFPLEKQTAVFYIGTNHTATLNDLRRHMLANFKQLPIS CCCCEECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCC GEYIHRDAFDIAARYGKDTFWVIKKFGTHWLPKLFALKANADRIAKKFSFLPHHLSDKFM CCHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHEECCHHHHHHHHHHCCHHHHHHHH QTLSKRLPEHLPQSLWQYREKYEHHLILKMGGTGVAEAREYLKQYFSESEKGGYFECNAV HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCH ETQAAMLHRFAVASAAIRYRATHENEVEDIVALDIALRRNDQDWFEVLPPEIDQKILHKL HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHEECCCCHHHHCCCCHHHHHHHHHH YYGHFMCHVFHQDYIVKKGVDCVALEHEMLALLDKRGAQYPAEHNVGHLYEAKPTLRKFY HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHH KDLDPTNSFNVGIGQTSKKKYWK HHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAHLLIPQLTEIVGSQHIITDAAKSEAYRSGYRFGTGKALAVVRPATLLEYWRVLKACV CCCEEHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHH RHDVIVINQAANTGLTGGSTPNGNDYDREIVIINTMRMDGIQLINNAEQVVCLPGSTLNE HCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCCCEEEECCCCCCCE LEIKLKPHGREPHSVIGSSCIGASVIGGVCNNSGGALVQRGPAYTEMALFAQLNEQGELE EEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCEE LKNHLGIDLGETPEEILENLQNNRYQRKDIQLDCGKGHDHTYCDHVRKIDEDSPARFNAD EHHCCCCCCCCCHHHHHHHHHCCCEECCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCC PNRHYEASGSAGKLAVFAVRLDTFPLEKQTAVFYIGTNHTATLNDLRRHMLANFKQLPIS CCCCEECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCC GEYIHRDAFDIAARYGKDTFWVIKKFGTHWLPKLFALKANADRIAKKFSFLPHHLSDKFM CCHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHEECCHHHHHHHHHHCCHHHHHHHH QTLSKRLPEHLPQSLWQYREKYEHHLILKMGGTGVAEAREYLKQYFSESEKGGYFECNAV HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCH ETQAAMLHRFAVASAAIRYRATHENEVEDIVALDIALRRNDQDWFEVLPPEIDQKILHKL HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHEECCCCHHHHCCCCHHHHHHHHHH YYGHFMCHVFHQDYIVKKGVDCVALEHEMLALLDKRGAQYPAEHNVGHLYEAKPTLRKFY HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHH KDLDPTNSFNVGIGQTSKKKYWK HHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]