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The map label for this gene is trpH [H]

Identifier: 126208151

GI number: 126208151

Start: 765785

End: 766603

Strand: Reverse

Name: trpH [H]

Synonym: APL_0671

Alternate gene names: 126208151

Gene position: 766603-765785 (Counterclockwise)

Preceding gene: 126208152

Following gene: 126208147

Centisome position: 33.7

GC content: 48.47

Gene sequence:

>819_bases
ATGAAATATGATTTACATTCACACAGTACCGCATCGGACGGTATGCTTAGCCCGACCGAGTTGGTTCAGCGTGCGTTAGA
GCAACAAATAGAAATGCTTGCCTTAACCGATCACGATACCGTAGCGGGGATTCAAGAAGCAAAACACGCAGCACAAGGGC
AACCGATTCGCTTTATTGCCGGCGTGGAAATTTCTATCGTTTGGGAAGGCAAAAGTATTCATCTTGCCGCTTTAAATGTG
GATGAAACGCATCCTGCATTAGTGGCATTGTTAGATAAGCAAGCGTTACTGCGTGAGCAAAGAGCGGTCGAAATCGGCGA
AAAACTTGCAAAAGCCGGTATTCCGAATGCTTATGAAGGGGCAAAAGCGTTAGCAAGCGGAGAGGTGACTCGTGCGCATT
ACGGGCGTTTTTTACACGAAAACGGTCATGTCCGAAATATCGAACACGCCTTTAAAAAGTATCTCGGTGGCGGTAAGCCG
GCTTACGTTAAGCCAATGTGGTGCAGTTTAGAAGAAGCGATTGAAGTCACACACCAAGCGGGCGGCGTGATTTGCATTGC
ACATCCGTTGCGTTATAAATTAACCGGACGTTGGATTCGCCGCTTAACCGCTGACTTTAAATTAGCCGGCGGTGACGGTA
TTGAGGTTGCCGGCTGCGGGCAAACACCGGATCAACGCCAACTGATCGCTCGTTGGGCAAAAGAGTTTGATTTATATGCT
TCGGTCGGTTCGGATTTCCATTACCCGACCGGTTGGATTGAGCTTGGCAGAGGGCTAATACTGCCGGCGGATTGCAAACC
GATTTGGGATTTGTTTTAA

Upstream 100 bases:

>100_bases
TTACCGTTTGCCTTCTACCTCTCGGGCTTATCCATTGAGTTTAGCTAAGAAAATTGAGGCGTACCGACAATTTTTTATTC
AAGCAGGATTACTTTAACGC

Downstream 100 bases:

>100_bases
GGGAAAAGGGCGTTTTAAACGCCCTTTGCTTTATCTGAATTATTGCACTTTAAATTGGCTAAACTCAGCCATTACTTTGC
CTAATTCAGCTACTCGCCGT

Product: TrpH-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKYDLHSHSTASDGMLSPTELVQRALEQQIEMLALTDHDTVAGIQEAKHAAQGQPIRFIAGVEISIVWEGKSIHLAALNV
DETHPALVALLDKQALLREQRAVEIGEKLAKAGIPNAYEGAKALASGEVTRAHYGRFLHENGHVRNIEHAFKKYLGGGKP
AYVKPMWCSLEEAIEVTHQAGGVICIAHPLRYKLTGRWIRRLTADFKLAGGDGIEVAGCGQTPDQRQLIARWAKEFDLYA
SVGSDFHYPTGWIELGRGLILPADCKPIWDLF

Sequences:

>Translated_272_residues
MKYDLHSHSTASDGMLSPTELVQRALEQQIEMLALTDHDTVAGIQEAKHAAQGQPIRFIAGVEISIVWEGKSIHLAALNV
DETHPALVALLDKQALLREQRAVEIGEKLAKAGIPNAYEGAKALASGEVTRAHYGRFLHENGHVRNIEHAFKKYLGGGKP
AYVKPMWCSLEEAIEVTHQAGGVICIAHPLRYKLTGRWIRRLTADFKLAGGDGIEVAGCGQTPDQRQLIARWAKEFDLYA
SVGSDFHYPTGWIELGRGLILPADCKPIWDLF
>Mature_272_residues
MKYDLHSHSTASDGMLSPTELVQRALEQQIEMLALTDHDTVAGIQEAKHAAQGQPIRFIAGVEISIVWEGKSIHLAALNV
DETHPALVALLDKQALLREQRAVEIGEKLAKAGIPNAYEGAKALASGEVTRAHYGRFLHENGHVRNIEHAFKKYLGGGKP
AYVKPMWCSLEEAIEVTHQAGGVICIAHPLRYKLTGRWIRRLTADFKLAGGDGIEVAGCGQTPDQRQLIARWAKEFDLYA
SVGSDFHYPTGWIELGRGLILPADCKPIWDLF

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=273, Percent_Identity=50.1831501831502, Blast_Score=270, Evalue=8e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 29960; Mature: 29960

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYDLHSHSTASDGMLSPTELVQRALEQQIEMLALTDHDTVAGIQEAKHAAQGQPIRFIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCEEEEE
GVEISIVWEGKSIHLAALNVDETHPALVALLDKQALLREQRAVEIGEKLAKAGIPNAYEG
CCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AKALASGEVTRAHYGRFLHENGHVRNIEHAFKKYLGGGKPAYVKPMWCSLEEAIEVTHQA
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEECHHHHCHHHHHHHHHHC
GGVICIAHPLRYKLTGRWIRRLTADFKLAGGDGIEVAGCGQTPDQRQLIARWAKEFDLYA
CCEEEEECCCHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
SVGSDFHYPTGWIELGRGLILPADCKPIWDLF
HCCCCCCCCCHHHHHCCCCEEECCCCHHHCCC
>Mature Secondary Structure
MKYDLHSHSTASDGMLSPTELVQRALEQQIEMLALTDHDTVAGIQEAKHAAQGQPIRFIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCEEEEE
GVEISIVWEGKSIHLAALNVDETHPALVALLDKQALLREQRAVEIGEKLAKAGIPNAYEG
CCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AKALASGEVTRAHYGRFLHENGHVRNIEHAFKKYLGGGKPAYVKPMWCSLEEAIEVTHQA
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEECHHHHCHHHHHHHHHHC
GGVICIAHPLRYKLTGRWIRRLTADFKLAGGDGIEVAGCGQTPDQRQLIARWAKEFDLYA
CCEEEEECCCHHHHHHHHHHHHHHCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
SVGSDFHYPTGWIELGRGLILPADCKPIWDLF
HCCCCCCCCCHHHHHCCCCEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]