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The map label for this gene is ydjN [C]

Identifier: 126208088

GI number: 126208088

Start: 691672

End: 692997

Strand: Direct

Name: ydjN [C]

Synonym: APL_0606

Alternate gene names: 126208088

Gene position: 691672-692997 (Clockwise)

Preceding gene: 126208087

Following gene: 126208090

Centisome position: 30.41

GC content: 42.53

Gene sequence:

>1326_bases
ATGACTATCCTTAATTTAGCGGTGTTTACCGCATTATTATACCTACTTTTCTTACTTTATAAACATACGCAAAAGCTAGG
ACAAACCGTATTTATCGGCTTATTGCTTGGATTGGTAAGCGGTGCGATTTTGCAGAATTTTTACCAAAAAGCTGAAATTG
ATGCGACATTAGAATGGATCAATTTAGTCGGTAACGGCTATGTACGTTTGTTACAAATGATCGTAATGCCGTTAGTGTTT
ATTTCGATTTTATCGGCAATTACCCGTCTAAAACAAGCCGGTTCACTTGGAAAAATCAGCTTTAGTGTACTATCGGTTTT
ATTGGTTACTACTGCGATTGCGGCGGCAATCGGTATTGCGATGGTGTATCTGTTCGATTTATCGGCGGAAGGATTAGTTG
CCGGCGAGAGAGAATTAGCTGCCCAAGGCAAAGTAGCGGGGCGTGCGGAGCAAGTATCAAACTTATCCGTCCCGGCGATG
TTGCTCTCTTTTATTCCGAAAAATCCGTTCTTAGAATTAACCGGTGCAAACCCGACTTCAATTATTAGTACGGTAATTTT
CTCGGCATTTTTAGGCGTAGCGGCATTAAGTTTGGCTAAAGAAGATGCGGCATTAGGCGAACGTATTGCCAGCGGTGTGG
ATACGTTAAATAAACTGATTATGCGTTTAGTCCGCTTTGTGATTCGTTTAACCCCTTACGGCGTATTTGCATTAATGGTA
AAAATGGCGGCCACCTCAAAATGGGCGGATATTGTCAATTTAGGCAGCTTTATTGTGGCGTCTTACTTAGCAATCGCTTT
GATGTTTTTGGTACACGGCATTTTACTTTTTGTCGCAAAAGTGAATCCGTTCGAGTATTACAAGAAAGTTTTACCGACAC
TTAGTTTTGCGTTTACTTCTCGCTCAAGTGCGGCGACTTTACCGTTAAATATCGAAACGCAAACCGATAAATTGGGTAAT
AATAATGTTATCGCTAATTTTTCGGCAACCTTTGGTGCAACCATTGGACAAAACGGCTGTGCGGGGATTTATCCTGCAAT
GTTAGCGGTAATGGTCGCACCGACGGTAGGTATTGATCCATTTAGTGTTGGCTACGTTGTCACGTTGATCTTAGTCGTAG
CGATTTCTTCATTCGGCATTGCCGGCGTTGGCGGCGGTGCAACTTTTGCAGCGATTGTAGTGCTTTCCACCTTAAATCTA
CCGATTGAATTAGTCGGTTTATTGATTTCGGTCGAGCCGTTAATTGATATGGGACGTACCGCATTAAATGTAAACGGCTC
AATGGTGGCGGGTACGTTAAGCAACAAGTGGCTTAATCGAGCGTAA

Upstream 100 bases:

>100_bases
AACGATATAACTTTTAGATCTATAAAATGAAGAAGTTGTATTGAAACGATAAGGCGAGAGTTATATGCTCGCCTTTCTTT
TTTATTGTGTGGAGGTTCGG

Downstream 100 bases:

>100_bases
CAAGCGGTGATTTTTGGCAAATTTTTTACGAAATTTGACCGCTTGCAGCAGAAAATAGAAAAGGGGCATTAGCCCCTTTT
TTGTTGCTATAGTCGAATAG

Product: symporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MTILNLAVFTALLYLLFLLYKHTQKLGQTVFIGLLLGLVSGAILQNFYQKAEIDATLEWINLVGNGYVRLLQMIVMPLVF
ISILSAITRLKQAGSLGKISFSVLSVLLVTTAIAAAIGIAMVYLFDLSAEGLVAGERELAAQGKVAGRAEQVSNLSVPAM
LLSFIPKNPFLELTGANPTSIISTVIFSAFLGVAALSLAKEDAALGERIASGVDTLNKLIMRLVRFVIRLTPYGVFALMV
KMAATSKWADIVNLGSFIVASYLAIALMFLVHGILLFVAKVNPFEYYKKVLPTLSFAFTSRSSAATLPLNIETQTDKLGN
NNVIANFSATFGATIGQNGCAGIYPAMLAVMVAPTVGIDPFSVGYVVTLILVVAISSFGIAGVGGGATFAAIVVLSTLNL
PIELVGLLISVEPLIDMGRTALNVNGSMVAGTLSNKWLNRA

Sequences:

>Translated_441_residues
MTILNLAVFTALLYLLFLLYKHTQKLGQTVFIGLLLGLVSGAILQNFYQKAEIDATLEWINLVGNGYVRLLQMIVMPLVF
ISILSAITRLKQAGSLGKISFSVLSVLLVTTAIAAAIGIAMVYLFDLSAEGLVAGERELAAQGKVAGRAEQVSNLSVPAM
LLSFIPKNPFLELTGANPTSIISTVIFSAFLGVAALSLAKEDAALGERIASGVDTLNKLIMRLVRFVIRLTPYGVFALMV
KMAATSKWADIVNLGSFIVASYLAIALMFLVHGILLFVAKVNPFEYYKKVLPTLSFAFTSRSSAATLPLNIETQTDKLGN
NNVIANFSATFGATIGQNGCAGIYPAMLAVMVAPTVGIDPFSVGYVVTLILVVAISSFGIAGVGGGATFAAIVVLSTLNL
PIELVGLLISVEPLIDMGRTALNVNGSMVAGTLSNKWLNRA
>Mature_440_residues
TILNLAVFTALLYLLFLLYKHTQKLGQTVFIGLLLGLVSGAILQNFYQKAEIDATLEWINLVGNGYVRLLQMIVMPLVFI
SILSAITRLKQAGSLGKISFSVLSVLLVTTAIAAAIGIAMVYLFDLSAEGLVAGERELAAQGKVAGRAEQVSNLSVPAML
LSFIPKNPFLELTGANPTSIISTVIFSAFLGVAALSLAKEDAALGERIASGVDTLNKLIMRLVRFVIRLTPYGVFALMVK
MAATSKWADIVNLGSFIVASYLAIALMFLVHGILLFVAKVNPFEYYKKVLPTLSFAFTSRSSAATLPLNIETQTDKLGNN
NVIANFSATFGATIGQNGCAGIYPAMLAVMVAPTVGIDPFSVGYVVTLILVVAISSFGIAGVGGGATFAAIVVLSTLNLP
IELVGLLISVEPLIDMGRTALNVNGSMVAGTLSNKWLNRA

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468566, Length=280, Percent_Identity=27.5, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI223468564, Length=272, Percent_Identity=27.2058823529412, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI5032093, Length=280, Percent_Identity=27.5, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI21314632, Length=421, Percent_Identity=25.8907363420428, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI40254478, Length=470, Percent_Identity=23.6170212765957, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI4827012, Length=261, Percent_Identity=28.3524904214559, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI66773030, Length=246, Percent_Identity=30.0813008130081, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI169790839, Length=249, Percent_Identity=26.1044176706827, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI194239697, Length=255, Percent_Identity=25.8823529411765, Blast_Score=79, Evalue=9e-15,
Organism=Escherichia coli, GI1788024, Length=441, Percent_Identity=58.5034013605442, Blast_Score=458, Evalue=1e-130,
Organism=Escherichia coli, GI1790514, Length=420, Percent_Identity=24.7619047619048, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI1789947, Length=415, Percent_Identity=23.6144578313253, Blast_Score=98, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI193206505, Length=451, Percent_Identity=25.4988913525499, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71983106, Length=409, Percent_Identity=25.1833740831296, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71983099, Length=409, Percent_Identity=25.1833740831296, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI193206654, Length=447, Percent_Identity=24.8322147651007, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17537407, Length=418, Percent_Identity=22.2488038277512, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71996953, Length=440, Percent_Identity=24.0909090909091, Blast_Score=85, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17541374, Length=414, Percent_Identity=23.6714975845411, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24583025, Length=434, Percent_Identity=25.5760368663594, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17137668, Length=434, Percent_Identity=25.5760368663594, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24583023, Length=434, Percent_Identity=25.5760368663594, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 46660; Mature: 46529

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILNLAVFTALLYLLFLLYKHTQKLGQTVFIGLLLGLVSGAILQNFYQKAEIDATLEWI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLVGNGYVRLLQMIVMPLVFISILSAITRLKQAGSLGKISFSVLSVLLVTTAIAAAIGIA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MVYLFDLSAEGLVAGERELAAQGKVAGRAEQVSNLSVPAMLLSFIPKNPFLELTGANPTS
HHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCHHHHHHHHCCCCCCEEECCCCHHH
IISTVIFSAFLGVAALSLAKEDAALGERIASGVDTLNKLIMRLVRFVIRLTPYGVFALMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KMAATSKWADIVNLGSFIVASYLAIALMFLVHGILLFVAKVNPFEYYKKVLPTLSFAFTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
RSSAATLPLNIETQTDKLGNNNVIANFSATFGATIGQNGCAGIYPAMLAVMVAPTVGIDP
CCCCEEEEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
FSVGYVVTLILVVAISSFGIAGVGGGATFAAIVVLSTLNLPIELVGLLISVEPLIDMGRT
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
ALNVNGSMVAGTLSNKWLNRA
EEECCCCEEEECHHHHHCCCC
>Mature Secondary Structure 
TILNLAVFTALLYLLFLLYKHTQKLGQTVFIGLLLGLVSGAILQNFYQKAEIDATLEWI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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EEECCCCEEEECHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]