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The map label for this gene is yhbY [C]

Identifier: 126207902

GI number: 126207902

Start: 475651

End: 476052

Strand: Reverse

Name: yhbY [C]

Synonym: APL_0418

Alternate gene names: 126207902

Gene position: 476052-475651 (Counterclockwise)

Preceding gene: 126207904

Following gene: 126207901

Centisome position: 20.93

GC content: 38.81

Gene sequence:

>402_bases
TTGCATTTTACTTTAAAATTCGCCCCTTTTGTGCTATTTTCTACGCCAAATTTTATTCACAAACAAACCACAGGTTTAAA
AACAATGTCTATTACATTAACAACGAAACAAAAACAATTTTTAAAAGGGTTAGCACACCACTTAAGTCCGGTTGTCATGC
TTGGCGGCAACGGCTTAACCGAAGGCGTGTTGGCTGAAATCGAAAACGCATTAGCTCATCACGAATTAATTAAAGTAAAA
ATTTCAGGTGCGGAGCGTGAAACCAAACAATTAATCATCGATGCGATTGTGCGTGAAACAAAAGCCGTTCCGGTTCAAAC
CATCGGTCACATTCTGGTGCTTTACCGCCAAAGCGAAGAGAAAAAAATCAGTTTACCTAAAGCAACCAAAGCCGTTTCAT
AA

Upstream 100 bases:

>100_bases
AAGACATTTCGCTAAATCTTGAGCCTCGTTTTTTACAATCATCGCAACACTTAACGTCGGCATAATCTTTCCTTTTTCGG
TTTATTTTGTTTGTCGTTCA

Downstream 100 bases:

>100_bases
TTTATTTTTATTCAAATCTGGCCGCTTGTAAGCGGTCTTTTTTATGAGGAAATTTTCCGTGGTTAAAAAACTCTCGATTT
TCACGTCTTTGATGTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MHFTLKFAPFVLFSTPNFIHKQTTGLKTMSITLTTKQKQFLKGLAHHLSPVVMLGGNGLTEGVLAEIENALAHHELIKVK
ISGAERETKQLIIDAIVRETKAVPVQTIGHILVLYRQSEEKKISLPKATKAVS

Sequences:

>Translated_133_residues
MHFTLKFAPFVLFSTPNFIHKQTTGLKTMSITLTTKQKQFLKGLAHHLSPVVMLGGNGLTEGVLAEIENALAHHELIKVK
ISGAERETKQLIIDAIVRETKAVPVQTIGHILVLYRQSEEKKISLPKATKAVS
>Mature_133_residues
MHFTLKFAPFVLFSTPNFIHKQTTGLKTMSITLTTKQKQFLKGLAHHLSPVVMLGGNGLTEGVLAEIENALAHHELIKVK
ISGAERETKQLIIDAIVRETKAVPVQTIGHILVLYRQSEEKKISLPKATKAVS

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=97, Percent_Identity=71.1340206185567, Blast_Score=135, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 14693; Mature: 14693

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS01301 UPF0044

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFTLKFAPFVLFSTPNFIHKQTTGLKTMSITLTTKQKQFLKGLAHHLSPVVMLGGNGLT
CEEEEEECCEEEECCCCHHHHHCCCCEEEEEEEECHHHHHHHHHHHHCCCEEEECCCCCC
EGVLAEIENALAHHELIKVKISGAERETKQLIIDAIVRETKAVPVQTIGHILVLYRQSEE
HHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCC
KKISLPKATKAVS
CEECCCCCCCCCC
>Mature Secondary Structure
MHFTLKFAPFVLFSTPNFIHKQTTGLKTMSITLTTKQKQFLKGLAHHLSPVVMLGGNGLT
CEEEEEECCEEEECCCCHHHHHCCCCEEEEEEEECHHHHHHHHHHHHCCCEEEECCCCCC
EGVLAEIENALAHHELIKVKISGAERETKQLIIDAIVRETKAVPVQTIGHILVLYRQSEE
HHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCCC
KKISLPKATKAVS
CEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]