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The map label for this gene is pgpB [H]

Identifier: 126207901

GI number: 126207901

Start: 474855

End: 475559

Strand: Reverse

Name: pgpB [H]

Synonym: APL_0417

Alternate gene names: 126207901

Gene position: 475559-474855 (Counterclockwise)

Preceding gene: 126207902

Following gene: 126207900

Centisome position: 20.91

GC content: 42.55

Gene sequence:

>705_bases
ATGTTGCTTATCCCGTTATTCACTTGGGCGACCGGTTGGAAGTGGACCTTCGGCGGTATGGATTACCACCTTTATGATCT
TGATTTCTGGTTATTTTTCTTAACCGAAACTGGCTCCACCCCTTACGCATTAATTACCTGCGTCCTCTTTATGCTTTGGT
TAATGTGGCTGACTCGTAAACATTATTCGTGGTTTTTAGTCGGCTTTATTTGTGCCGGATCCGTAGTCGGTACGCAAATC
ATCAAAGAAGGAGCGAAAGCGGTGTTTAAAGAGCCTCGCCCGTTTGTAACGGAAATGTTCCAAGCACAAACGGAACAATT
TTATGCCCTACCGGAAGCGGAACAAGCTCAAGCGGTATTAACCCTTGCGGAAAAAACGCATCCGAATGATGCGGATTTTA
TCGTATCACATCAAGCCGGCGAATTAGGTTATTCCTTCCCTTCCGGTCATACCATTTTTGCCGTTTCTTGGTTATTGGTT
TTCGGCGGATTACTCTTCGGTTTAAGCGGCAAAGCGGTCGTTTTTGCGCAAATTTTTACCATTTTATGGGCAAGTTTGAT
GTTGATCAGCCGATTGCGTTTAGGTATGCACTATCCTATTGATTTGTTTGTCAGTACGTTAATTGCTTGGTTATTCCACA
TTATCGTATTTGTTTGGGTAATTCCTTTCCTAGAAACCTTTAAAATCTTTCAAAAACGAGGTTAA

Upstream 100 bases:

>100_bases
GTTTCATAATTTATTTTTATTCAAATCTGGCCGCTTGTAAGCGGTCTTTTTTATGAGGAAATTTTCCGTGGTTAAAAAAC
TCTCGATTTTCACGTCTTTG

Downstream 100 bases:

>100_bases
TTATGGCTGTTTATTACGGTTTAGATGTAGGCGGTACGAAAATTGAGTTGGCGGCATTTAATGCTCAACTGGAAAAACTG
TATAGCGAGCGAGTGCCAAC

Product: phosphatidylglycerophosphatase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLLIPLFTWATGWKWTFGGMDYHLYDLDFWLFFLTETGSTPYALITCVLFMLWLMWLTRKHYSWFLVGFICAGSVVGTQI
IKEGAKAVFKEPRPFVTEMFQAQTEQFYALPEAEQAQAVLTLAEKTHPNDADFIVSHQAGELGYSFPSGHTIFAVSWLLV
FGGLLFGLSGKAVVFAQIFTILWASLMLISRLRLGMHYPIDLFVSTLIAWLFHIIVFVWVIPFLETFKIFQKRG

Sequences:

>Translated_234_residues
MLLIPLFTWATGWKWTFGGMDYHLYDLDFWLFFLTETGSTPYALITCVLFMLWLMWLTRKHYSWFLVGFICAGSVVGTQI
IKEGAKAVFKEPRPFVTEMFQAQTEQFYALPEAEQAQAVLTLAEKTHPNDADFIVSHQAGELGYSFPSGHTIFAVSWLLV
FGGLLFGLSGKAVVFAQIFTILWASLMLISRLRLGMHYPIDLFVSTLIAWLFHIIVFVWVIPFLETFKIFQKRG
>Mature_234_residues
MLLIPLFTWATGWKWTFGGMDYHLYDLDFWLFFLTETGSTPYALITCVLFMLWLMWLTRKHYSWFLVGFICAGSVVGTQI
IKEGAKAVFKEPRPFVTEMFQAQTEQFYALPEAEQAQAVLTLAEKTHPNDADFIVSHQAGELGYSFPSGHTIFAVSWLLV
FGGLLFGLSGKAVVFAQIFTILWASLMLISRLRLGMHYPIDLFVSTLIAWLFHIIVFVWVIPFLETFKIFQKRG

Specific function: Hydrolyzes phosphatidylglycerophosphate, phosphatidic acid, and lysophosphatidic acid; the pattern of activities varies according to subcellular location [H]

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Cell outer membrane; Multi-pass membrane protein (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787534, Length=215, Percent_Identity=34.8837209302326, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 26861; Mature: 26861

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIPLFTWATGWKWTFGGMDYHLYDLDFWLFFLTETGSTPYALITCVLFMLWLMWLTRK
CEEEEEEHHCCCCEEEECCCEEEEEHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHH
HYSWFLVGFICAGSVVGTQIIKEGAKAVFKEPRPFVTEMFQAQTEQFYALPEAEQAQAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
TLAEKTHPNDADFIVSHQAGELGYSFPSGHTIFAVSWLLVFGGLLFGLSGKAVVFAQIFT
HHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ILWASLMLISRLRLGMHYPIDLFVSTLIAWLFHIIVFVWVIPFLETFKIFQKRG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLIPLFTWATGWKWTFGGMDYHLYDLDFWLFFLTETGSTPYALITCVLFMLWLMWLTRK
CEEEEEEHHCCCCEEEECCCEEEEEHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHH
HYSWFLVGFICAGSVVGTQIIKEGAKAVFKEPRPFVTEMFQAQTEQFYALPEAEQAQAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
TLAEKTHPNDADFIVSHQAGELGYSFPSGHTIFAVSWLLVFGGLLFGLSGKAVVFAQIFT
HHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ILWASLMLISRLRLGMHYPIDLFVSTLIAWLFHIIVFVWVIPFLETFKIFQKRG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]