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The map label for this gene is rhaT [C]

Identifier: 126207577

GI number: 126207577

Start: 96348

End: 97166

Strand: Reverse

Name: rhaT [C]

Synonym: APL_0089

Alternate gene names: 126207577

Gene position: 97166-96348 (Counterclockwise)

Preceding gene: 126207578

Following gene: 126207576

Centisome position: 4.27

GC content: 42.86

Gene sequence:

>819_bases
GTGCATTTTACCGCCATCTTTTTTGGTGCTTCCGGTATTTTTGGTGCATTAATTAAAAGCCGCCCGGATACACTTGTGCT
TGGGCGAGTGATGATTGCGCTTGTTTGTATCTCTTTGTATTTTATATGGAAAAAACAAGCGCTTGTAAAACTCACTCGCC
GAGAGTTATTTAGCCAAATATTGTCCGGCGTATTACTTGCCGCTCATTGGATCACCTTTTTTACTGCGGTACAAGTCGGC
GGTGTCGCCTTAGCCACCTTAGGCTTCGCCAGCTTTCCTGCTTTTGTCGCATTATTTGAAATGCTCTTTTTTAGAGAAAA
ACTCAGTTATCGTGAAGGCTTTTTACTTGTGGCGATCACTATCGGCTTAATTTTGGTCACACCGGAATTTACTTTTGGTA
ATCAGGCAACATTAGGGCTTTTATGGGGTGTTTTATCCGCTTTGGTCTATGGCGTGTTGGCGGTTGTAAATCGGAAAACT
ATGAGCAAATTATCCGGTACACAAACGAGCTGGTGGCAATATTTAGTAGCGATGTTGATCCTTTTACCTTTTTCGACGAC
AAGTTTGCTCAATGCTCCTGCCCTCGATTGGTTTTGGATTTTCTGTATCGGCTTTTTCTGTACCACACTGGCATATACGC
TATTTGTCTCCAGCCTTGATACGATCAATGCCCGTACCGCTTCGATGATTATCTCGCTTGAACCGGTATATGCCATTGCA
ATTGCGTGGCTATGTTTTAACGAAGTACCGACATTAACAATGTTGATTGGCGGTGCGATTATTTTACTCTCGGTCGCTTG
GGCTAACTTAAAGAAATAA

Upstream 100 bases:

>100_bases
CACAGCAAGATAACAATACGTTTGATGCCGAATTTGAACGCAAACAAGATCAGGATAAATGGATTAAATAGTGGATAAAC
ATTCGCTCGCACTATTGAAA

Downstream 100 bases:

>100_bases
ATGATGTTTAAAGCTAAATTTAATCAAAAAAATAAAGCTCGTTCCGCAACAAACAAACCGAACTTGCAAAATAGAACCAA
AAAACGACCGCTTAAACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MHFTAIFFGASGIFGALIKSRPDTLVLGRVMIALVCISLYFIWKKQALVKLTRRELFSQILSGVLLAAHWITFFTAVQVG
GVALATLGFASFPAFVALFEMLFFREKLSYREGFLLVAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGVLAVVNRKT
MSKLSGTQTSWWQYLVAMLILLPFSTTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASMIISLEPVYAIA
IAWLCFNEVPTLTMLIGGAIILLSVAWANLKK

Sequences:

>Translated_272_residues
MHFTAIFFGASGIFGALIKSRPDTLVLGRVMIALVCISLYFIWKKQALVKLTRRELFSQILSGVLLAAHWITFFTAVQVG
GVALATLGFASFPAFVALFEMLFFREKLSYREGFLLVAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGVLAVVNRKT
MSKLSGTQTSWWQYLVAMLILLPFSTTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASMIISLEPVYAIA
IAWLCFNEVPTLTMLIGGAIILLSVAWANLKK
>Mature_272_residues
MHFTAIFFGASGIFGALIKSRPDTLVLGRVMIALVCISLYFIWKKQALVKLTRRELFSQILSGVLLAAHWITFFTAVQVG
GVALATLGFASFPAFVALFEMLFFREKLSYREGFLLVAITIGLILVTPEFTFGNQATLGLLWGVLSALVYGVLAVVNRKT
MSKLSGTQTSWWQYLVAMLILLPFSTTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASMIISLEPVYAIA
IAWLCFNEVPTLTMLIGGAIILLSVAWANLKK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30026; Mature: 30026

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFTAIFFGASGIFGALIKSRPDTLVLGRVMIALVCISLYFIWKKQALVKLTRRELFSQI
CCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGVLLAAHWITFFTAVQVGGVALATLGFASFPAFVALFEMLFFREKLSYREGFLLVAIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IGLILVTPEFTFGNQATLGLLWGVLSALVYGVLAVVNRKTMSKLSGTQTSWWQYLVAMLI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LLPFSTTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASMIISLEPVYAIA
HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECHHHHHH
IAWLCFNEVPTLTMLIGGAIILLSVAWANLKK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHFTAIFFGASGIFGALIKSRPDTLVLGRVMIALVCISLYFIWKKQALVKLTRRELFSQI
CCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGVLLAAHWITFFTAVQVGGVALATLGFASFPAFVALFEMLFFREKLSYREGFLLVAIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IGLILVTPEFTFGNQATLGLLWGVLSALVYGVLAVVNRKTMSKLSGTQTSWWQYLVAMLI
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LLPFSTTSLLNAPALDWFWIFCIGFFCTTLAYTLFVSSLDTINARTASMIISLEPVYAIA
HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECHHHHHH
IAWLCFNEVPTLTMLIGGAIILLSVAWANLKK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA