| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is fhuA [C]
Identifier: 126176471
GI number: 126176471
Start: 5020361
End: 5022757
Strand: Reverse
Name: fhuA [C]
Synonym: Sbal_4286
Alternate gene names: 126176471
Gene position: 5022757-5020361 (Counterclockwise)
Preceding gene: 126176472
Following gene: 126176470
Centisome position: 97.96
GC content: 47.81
Gene sequence:
>2397_bases ATGATAAAAAGCACATCACAGAAATTCTTGTTAAGTACATTGGCCGTGTTGGTGAGTTCTCACCTTTGGGCAGCCGAAGC ACCGCAACAGGAAGAAGCCAAGAAAGACGCGTTAGGTTTAGAAAGAATTACCGTGACTGGGGTTGCCCGCGGTACTCGTG TTATGGACTCGAGTGTGTCAGTCAGCAGCGTGTCACTGGCTGAGCTGGAAGTGAGCTCGCCACGTTCATCGGCCGAGGCA TTTAGTATTATTCCGGGGATGAAGGTTGAGTCTACTGGTGGCGAAGGTAACGCTAACATTGCCGTGCGTGGTTTACCTGT GGCGTCTGGTGGTGCTAAGTTCCTACAAATTCAAGAAGATGGTTTGCCAATCCTGCAGTTTGGCGATATCGCCTTCGGTA ACGCAGACATCTTTTTACGCTTAGATTCAACAGTGCAAACCATTGAATCTATCCGTGGTGGCTCGGCATCGACTGCGGCC AGTAATGCGCCCGGCGGCATTATCAACGTGATCAGTAAAACGGGCACCTCGGATTCGGGCAGTGTTGCTACCACTCTAGG ACTGGATTACGACACTTTCCGTACCGACTTTGAATACGGCACTAGCATCAACGACAGCCTGCGTTTCCATGTGGGCGGTT TTGTGCGCACGGGCGAAGGCCCACGCGACGCTGGCTATAACGCCAACAAAGGCGGCCAGATCAAAGCTAACTTAACCAAA GAATTCGATAAGGGTTACGTTCGTCTGTATTTCAAACATTTAGACGATAAAAGCATTGGTTACTTACCTATGCCTATGTA CTCGGATGGCAGTTCAATCCCAGGTTTTGATGCTAAATCCGATGCGATTCAATCCGCGTATTTCCAATCAACCTTTAGCT TAGGTGCCGATGGCGAACGTCGCCGTGGCGATATGCGCGATGGTATGAATCCTGTAGTTAATTCTGTCGGCTTAGAAGCA TCATTCGATTTAGGTAACGATTGGCAGGTAGAAAACCGTTTCCGTTTCTCCGATGTGAGCGGTAACTTCATTGCGCCATT CCCAGCCGAAGTGGCAAACGGTAGCGACATCGCGACCAGTATTGCAGGCACTGGCGCTAAGTTGATTTACGCTAATGGAC CTAATGCTGGTAGTCAGATGGACGGTTTAGCCATGCGTATCAATACCTTTGATGTGCAAATGAATGACTTTGGCTCAATC GTAAACGACTTCAAATTGACTAAAACCTTCGACGATACCAGCGTGACCTTAGGTTATTACAATGCGGTGCAAAACATCGG CATGACCTGGATGTGGAACTCTTATCTGATGGAAGTAAAAGGCGATAATGCCGCGCTATTAGATGTGGTTGCCGCCGATG GTACTGCGTATTCTGACAACGGTCTCTATGGTTATGGCGTACCTTACTGGGGAAATTGTTGCCAACGTAATTACGATACC GACTACACCATTAAAGCGCCTTACCTCGCGTTAGCCTCGAGTTTTGGTGACTTATCGCTTGATGCCAGTGTGCGTTATGA CAGTGGTGATGCGAGCGGTAACTACGCAGGTAGCGTGCAATCGCAAGTGGATATGAATCTAGATGGAGTGATTTCAATCC CTGAGCAAAGCGTGTCTTCCATCGATAATGCTAACCCTCAGCCAGTAAATTACGATTGGAGTTACACCTCTTACTCATTA GGTGCTAACTATCAATTTTCCAGTGACTTAGCCGCCTTTGGTCGCTTGAGCCATGGTGGCCGCGCCAATGCCGACCGTCT ATTGTTTGGTAAGGTGCGTGCCGATGGTTCAGTGGCGAAGGAAGATGCGGTTGATATCGTTGATCAGTACGAGTTAGGTG TTAAGTACCGTTACGATGATTTGTCTGTGTTCGCGACAGCGTTCTACTCTGAAACCGAAGAGCAAAACTTTGAAGCCACC AGCCAACGTTTCTTCGACCGTAAGTACAAAGCCAAAGGTATCGAAATCGAGTCGGCCTATTTTATCGGTGACTTCGACTT TAGAGGCAACCTAACCTGGACCGATGCTGAGATTGCTAAAGATGCATTGACGCCAGAAGTCGTGGGTAACACCCCAAGAA GACAGGCTGACTTTATCTACTCTTTGATGGGCCGTTACAACTTTGACCAAGGTTCAGTGGGCGTTAACTTAATCGGTACC ACGGATTCTTATGCTCAAGATAATAACGACTTAAGTTTCGACGGCTACAACCAAGTAAATGCCTTTGCAACTTACAATCT GACCGAAGCTATGAGTGTGTCTTTAAACGTCAACAACTTGTTTAATGCCACTGGTATTACTGAAGCGGAAGAAGGCTCAA TCCCTGATAACAATATCATCCGTGCCCGTACCATTAATGGCCGCACCACGAGTGCGACGCTTAAATACGAGTTCTAA
Upstream 100 bases:
>100_bases CTTGAGCAATCACTAAGATGGTTCTTCGATTAATCACAATTCGGTAGAGGCAGCCATGGGGAGATAGGGCTGCATCTCAA ATATGGGTGGGGACATAAAA
Downstream 100 bases:
>100_bases GCGGATCTTGCTACAGAAACTGTTTTTACAGAAAAAATGTTAAGCCCAAAACAGCCCATGAAAGTGGGCTTTTTGCCTGC TACAGAATGCAGAATATAGA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; Nb-Dependent Receptor Plug
Number of amino acids: Translated: 798; Mature: 798
Protein sequence:
>798_residues MIKSTSQKFLLSTLAVLVSSHLWAAEAPQQEEAKKDALGLERITVTGVARGTRVMDSSVSVSSVSLAELEVSSPRSSAEA FSIIPGMKVESTGGEGNANIAVRGLPVASGGAKFLQIQEDGLPILQFGDIAFGNADIFLRLDSTVQTIESIRGGSASTAA SNAPGGIINVISKTGTSDSGSVATTLGLDYDTFRTDFEYGTSINDSLRFHVGGFVRTGEGPRDAGYNANKGGQIKANLTK EFDKGYVRLYFKHLDDKSIGYLPMPMYSDGSSIPGFDAKSDAIQSAYFQSTFSLGADGERRRGDMRDGMNPVVNSVGLEA SFDLGNDWQVENRFRFSDVSGNFIAPFPAEVANGSDIATSIAGTGAKLIYANGPNAGSQMDGLAMRINTFDVQMNDFGSI VNDFKLTKTFDDTSVTLGYYNAVQNIGMTWMWNSYLMEVKGDNAALLDVVAADGTAYSDNGLYGYGVPYWGNCCQRNYDT DYTIKAPYLALASSFGDLSLDASVRYDSGDASGNYAGSVQSQVDMNLDGVISIPEQSVSSIDNANPQPVNYDWSYTSYSL GANYQFSSDLAAFGRLSHGGRANADRLLFGKVRADGSVAKEDAVDIVDQYELGVKYRYDDLSVFATAFYSETEEQNFEAT SQRFFDRKYKAKGIEIESAYFIGDFDFRGNLTWTDAEIAKDALTPEVVGNTPRRQADFIYSLMGRYNFDQGSVGVNLIGT TDSYAQDNNDLSFDGYNQVNAFATYNLTEAMSVSLNVNNLFNATGITEAEEGSIPDNNIIRARTINGRTTSATLKYEF
Sequences:
>Translated_798_residues MIKSTSQKFLLSTLAVLVSSHLWAAEAPQQEEAKKDALGLERITVTGVARGTRVMDSSVSVSSVSLAELEVSSPRSSAEA FSIIPGMKVESTGGEGNANIAVRGLPVASGGAKFLQIQEDGLPILQFGDIAFGNADIFLRLDSTVQTIESIRGGSASTAA SNAPGGIINVISKTGTSDSGSVATTLGLDYDTFRTDFEYGTSINDSLRFHVGGFVRTGEGPRDAGYNANKGGQIKANLTK EFDKGYVRLYFKHLDDKSIGYLPMPMYSDGSSIPGFDAKSDAIQSAYFQSTFSLGADGERRRGDMRDGMNPVVNSVGLEA SFDLGNDWQVENRFRFSDVSGNFIAPFPAEVANGSDIATSIAGTGAKLIYANGPNAGSQMDGLAMRINTFDVQMNDFGSI VNDFKLTKTFDDTSVTLGYYNAVQNIGMTWMWNSYLMEVKGDNAALLDVVAADGTAYSDNGLYGYGVPYWGNCCQRNYDT DYTIKAPYLALASSFGDLSLDASVRYDSGDASGNYAGSVQSQVDMNLDGVISIPEQSVSSIDNANPQPVNYDWSYTSYSL GANYQFSSDLAAFGRLSHGGRANADRLLFGKVRADGSVAKEDAVDIVDQYELGVKYRYDDLSVFATAFYSETEEQNFEAT SQRFFDRKYKAKGIEIESAYFIGDFDFRGNLTWTDAEIAKDALTPEVVGNTPRRQADFIYSLMGRYNFDQGSVGVNLIGT TDSYAQDNNDLSFDGYNQVNAFATYNLTEAMSVSLNVNNLFNATGITEAEEGSIPDNNIIRARTINGRTTSATLKYEF >Mature_798_residues MIKSTSQKFLLSTLAVLVSSHLWAAEAPQQEEAKKDALGLERITVTGVARGTRVMDSSVSVSSVSLAELEVSSPRSSAEA FSIIPGMKVESTGGEGNANIAVRGLPVASGGAKFLQIQEDGLPILQFGDIAFGNADIFLRLDSTVQTIESIRGGSASTAA SNAPGGIINVISKTGTSDSGSVATTLGLDYDTFRTDFEYGTSINDSLRFHVGGFVRTGEGPRDAGYNANKGGQIKANLTK EFDKGYVRLYFKHLDDKSIGYLPMPMYSDGSSIPGFDAKSDAIQSAYFQSTFSLGADGERRRGDMRDGMNPVVNSVGLEA SFDLGNDWQVENRFRFSDVSGNFIAPFPAEVANGSDIATSIAGTGAKLIYANGPNAGSQMDGLAMRINTFDVQMNDFGSI VNDFKLTKTFDDTSVTLGYYNAVQNIGMTWMWNSYLMEVKGDNAALLDVVAADGTAYSDNGLYGYGVPYWGNCCQRNYDT DYTIKAPYLALASSFGDLSLDASVRYDSGDASGNYAGSVQSQVDMNLDGVISIPEQSVSSIDNANPQPVNYDWSYTSYSL GANYQFSSDLAAFGRLSHGGRANADRLLFGKVRADGSVAKEDAVDIVDQYELGVKYRYDDLSVFATAFYSETEEQNFEAT SQRFFDRKYKAKGIEIESAYFIGDFDFRGNLTWTDAEIAKDALTPEVVGNTPRRQADFIYSLMGRYNFDQGSVGVNLIGT TDSYAQDNNDLSFDGYNQVNAFATYNLTEAMSVSLNVNNLFNATGITEAEEGSIPDNNIIRARTINGRTTSATLKYEF
Specific function: This Receptor Binds The Ferrichrome-Iron Ligand. It Interacts With The Tonb Protein, Which Is Responsible For Energy Coupling Of The Ferrichrome-Promoted Iron Transport System. Acts As A Receptor For Bacteriophage T5 As Well As T1, Phi80 And Colicin M. B
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86241; Mature: 86241
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSTSQKFLLSTLAVLVSSHLWAAEAPQQEEAKKDALGLERITVTGVARGTRVMDSSVS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCEEECCCCC VSSVSLAELEVSSPRSSAEAFSIIPGMKVESTGGEGNANIAVRGLPVASGGAKFLQIQED CCEEEEEEEEECCCCCCCCCEEECCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEECC GLPILQFGDIAFGNADIFLRLDSTVQTIESIRGGSASTAASNAPGGIINVISKTGTSDSG CCCEEEECCEEECCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCC SVATTLGLDYDTFRTDFEYGTSINDSLRFHVGGFVRTGEGPRDAGYNANKGGQIKANLTK CEEEEECCCHHHHCCCCCCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCEEEEECHH EFDKGYVRLYFKHLDDKSIGYLPMPMYSDGSSIPGFDAKSDAIQSAYFQSTFSLGADGER CCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH RRGDMRDGMNPVVNSVGLEASFDLGNDWQVENRFRFSDVSGNFIAPFPAEVANGSDIATS HCCCHHCCCHHHHHHCCCEEEECCCCCCEECCEEEEECCCCCEECCCCHHHCCCCHHHHH IAGTGAKLIYANGPNAGSQMDGLAMRINTFDVQMNDFGSIVNDFKLTKTFDDTSVTLGYY HCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEECHHHHHHHCCEEEEEECCCEEEEEEH NAVQNIGMTWMWNSYLMEVKGDNAALLDVVAADGTAYSDNGLYGYGVPYWGNCCQRNYDT HHHHHCCEEEEEEEEEEEECCCCEEEEEEEECCCCEECCCCEEECCCCCCCHHHCCCCCC DYTIKAPYLALASSFGDLSLDASVRYDSGDASGNYAGSVQSQVDMNLDGVISIPEQSVSS CEEEECCHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCEEECCHHHHHH IDNANPQPVNYDWSYTSYSLGANYQFSSDLAAFGRLSHGGRANADRLLFGKVRADGSVAK HCCCCCCCCCCCCCCCEEECCCCCEECCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCH EDAVDIVDQYELGVKYRYDDLSVFATAFYSETEEQNFEATSQRFFDRKYKAKGIEIESAY HHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEE FIGDFDFRGNLTWTDAEIAKDALTPEVVGNTPRRQADFIYSLMGRYNFDQGSVGVNLIGT EEEEEECCCCEEECHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEC TDSYAQDNNDLSFDGYNQVNAFATYNLTEAMSVSLNVNNLFNATGITEAEEGSIPDNNII CCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEHHHEECCCCCCCCCCCCCCCCCEE RARTINGRTTSATLKYEF EEEEECCCCEEEEEEEEC >Mature Secondary Structure MIKSTSQKFLLSTLAVLVSSHLWAAEAPQQEEAKKDALGLERITVTGVARGTRVMDSSVS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCEEECCCCC VSSVSLAELEVSSPRSSAEAFSIIPGMKVESTGGEGNANIAVRGLPVASGGAKFLQIQED CCEEEEEEEEECCCCCCCCCEEECCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEECC GLPILQFGDIAFGNADIFLRLDSTVQTIESIRGGSASTAASNAPGGIINVISKTGTSDSG CCCEEEECCEEECCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCC SVATTLGLDYDTFRTDFEYGTSINDSLRFHVGGFVRTGEGPRDAGYNANKGGQIKANLTK CEEEEECCCHHHHCCCCCCCCCCCCCEEEEECEEEECCCCCCCCCCCCCCCCEEEEECHH EFDKGYVRLYFKHLDDKSIGYLPMPMYSDGSSIPGFDAKSDAIQSAYFQSTFSLGADGER CCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH RRGDMRDGMNPVVNSVGLEASFDLGNDWQVENRFRFSDVSGNFIAPFPAEVANGSDIATS HCCCHHCCCHHHHHHCCCEEEECCCCCCEECCEEEEECCCCCEECCCCHHHCCCCHHHHH IAGTGAKLIYANGPNAGSQMDGLAMRINTFDVQMNDFGSIVNDFKLTKTFDDTSVTLGYY HCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEECHHHHHHHCCEEEEEECCCEEEEEEH NAVQNIGMTWMWNSYLMEVKGDNAALLDVVAADGTAYSDNGLYGYGVPYWGNCCQRNYDT HHHHHCCEEEEEEEEEEEECCCCEEEEEEEECCCCEECCCCEEECCCCCCCHHHCCCCCC DYTIKAPYLALASSFGDLSLDASVRYDSGDASGNYAGSVQSQVDMNLDGVISIPEQSVSS CEEEECCHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCEEECCHHHHHH IDNANPQPVNYDWSYTSYSLGANYQFSSDLAAFGRLSHGGRANADRLLFGKVRADGSVAK HCCCCCCCCCCCCCCCEEECCCCCEECCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCH EDAVDIVDQYELGVKYRYDDLSVFATAFYSETEEQNFEATSQRFFDRKYKAKGIEIESAY HHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEE FIGDFDFRGNLTWTDAEIAKDALTPEVVGNTPRRQADFIYSLMGRYNFDQGSVGVNLIGT EEEEEECCCCEEECHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEC TDSYAQDNNDLSFDGYNQVNAFATYNLTEAMSVSLNVNNLFNATGITEAEEGSIPDNNII CCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEHHHEECCCCCCCCCCCCCCCCCEE RARTINGRTTSATLKYEF EEEEECCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA