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The map label for this gene is scrK [H]

Identifier: 126176470

GI number: 126176470

Start: 5019282

End: 5020241

Strand: Reverse

Name: scrK [H]

Synonym: Sbal_4285

Alternate gene names: 126176470

Gene position: 5020241-5019282 (Counterclockwise)

Preceding gene: 126176471

Following gene: 126176469

Centisome position: 97.91

GC content: 53.12

Gene sequence:

>960_bases
ATGACGGTATTACTCAGTTTTGGTGAGGTGTTAGTGGACTTGCTGCCAACCGATGCCACGGGCAAACATCATCAGCCGAT
TGCGGGTGGCGCGCCCGCTAATGTGGCCGTGGGTTACGCTAAACTCGGCGGTAAGAGTTACTTTGCCGGTGGCATCAGCG
CCGACCATTATGGCGTTATGTTAAAGCAAGCCTTAGCGGATCAGGGGGTGGCGACCGATTATCTTGCCGAAGTGCCGGGC
GCCGCTACCGCGACTGTGCTGGTGAATTTAGATGAACAGGGTGAGCGCACCTTTGAGTTCAACCGAAATGGCACAGCCGA
TATGCGCTACAGCAATCAGCATTTTGACAATATCCCATGGCAGGGGATTGATATCTTTCACCTTTGCTCGAATACCTTTA
CCGAAACCGCCATCTTTAACACTAGCCTTTATGGTGCGCGTTGTGCCAATGCATTCGCGACTTTAGTGAGTTTCGATGTG
AACCTGCGTTTATCCCTGTGGCAGGATACGTCCTTGCTGGCCGAGCGGGTTGAGCAGTGTTTTCGCTACACTCAAGTGCT
GAAAATGAGCCGCGAAGAAGCGGACTATTTAGCGCTGGCGCGGGATAAGAGCTTTGAAGATTATCTGCAGTTCTGCCTCG
CCCAAGGGGTTGAGGTGATTTTGGTCACCGATGGCGCCAACCCAGTGCAATGCATCACAGCGCAGCAAAGGTTTAGCGTA
CCCGTCCCCAAAATCTCAGCCGTCGATACCACGGCCGCGGGCGACAGTTTTATCTCAGGCTTCCTGTTCGCCTTAGGCTT
AGAGCTGGAATACGATTTAGTCAATTTGACCTTGAAACAAAGGATCGAAAGCAAAGCGCACTTAGAGGCGGCGGTGGTGT
TTGCAACTCGCTGCGGCGCGATTACCTGCGGACAAAAGGGCGCGTTTCCCTCCTTACCTACGTTGGCGCAGGTTAGCTAA

Upstream 100 bases:

>100_bases
CTGTTTTTACAGAAAAAATGTTAAGCCCAAAACAGCCCATGAAAGTGGGCTTTTTGCCTGCTACAGAATGCAGAATATAG
AATACAAAGTTGGAGTGGAA

Downstream 100 bases:

>100_bases
ACCTGCCTGTATTAACGATAAAATCCAAGGCGAGCCTGTTGAGTTGACCTTGGATTTTTTGCCTTTTAGATTTTCCGCTC
GTCATTTTTCAATAGCATAG

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVMLKQALADQGVATDYLAEVPG
AATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPWQGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDV
NLRLSLWQDTSLLAERVEQCFRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSV
PVPKISAVDTTAAGDSFISGFLFALGLELEYDLVNLTLKQRIESKAHLEAAVVFATRCGAITCGQKGAFPSLPTLAQVS

Sequences:

>Translated_319_residues
MTVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVMLKQALADQGVATDYLAEVPG
AATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPWQGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDV
NLRLSLWQDTSLLAERVEQCFRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSV
PVPKISAVDTTAAGDSFISGFLFALGLELEYDLVNLTLKQRIESKAHLEAAVVFATRCGAITCGQKGAFPSLPTLAQVS
>Mature_318_residues
TVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVMLKQALADQGVATDYLAEVPGA
ATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPWQGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDVN
LRLSLWQDTSLLAERVEQCFRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSVP
VPKISAVDTTAAGDSFISGFLFALGLELEYDLVNLTLKQRIESKAHLEAAVVFATRCGAITCGQKGAFPSLPTLAQVS

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.4 [H]

Molecular weight: Translated: 34531; Mature: 34400

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVM
CEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEECCCCCCHHHHH
LKQALADQGVATDYLAEVPGAATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPW
HHHHHHCCCCCHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCC
QGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDVNLRLSLWQDTSLLAERVEQC
CCCHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHH
FRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSV
HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECHHHCCC
PVPKISAVDTTAAGDSFISGFLFALGLELEYDLVNLTLKQRIESKAHLEAAVVFATRCGA
CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEHHCCE
ITCGQKGAFPSLPTLAQVS
EECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVM
EEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEECCCCCCHHHHH
LKQALADQGVATDYLAEVPGAATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPW
HHHHHHCCCCCHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCC
QGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDVNLRLSLWQDTSLLAERVEQC
CCCHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHH
FRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSV
HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECHHHCCC
PVPKISAVDTTAAGDSFISGFLFALGLELEYDLVNLTLKQRIESKAHLEAAVVFATRCGA
CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEHHCCE
ITCGQKGAFPSLPTLAQVS
EECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2174811 [H]