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The map label for this gene is azlC [H]

Identifier: 126176433

GI number: 126176433

Start: 4974125

End: 4974838

Strand: Reverse

Name: azlC [H]

Synonym: Sbal_4248

Alternate gene names: 126176433

Gene position: 4974838-4974125 (Counterclockwise)

Preceding gene: 126176434

Following gene: 126176432

Centisome position: 97.03

GC content: 42.44

Gene sequence:

>714_bases
GTGATTGTAGTGAACATAAACCGCATATTTTATATAGCTAAATTGACGATCCCAATCGCAACCGCTTATGTACCACTCGG
GCTTGCTTTGGGGGTATTTATGGTGTCGAGTGGCGTTCAATGGTTTTGGGCACCGGTGGCGGCATTGGTTATTTTCGCCG
GTTCAATTGAGTTCTTGGTCGTTAGTTTTATTCTCGCAGGGCTGCCATTGGCGACTGTGGCATGGACGACGTTAATCGTT
AATTTTCGTCATATTTTTTATGGGTTATCTTTTCCACTTAAGTCACTGCGTACGCCATTGCAAAAGTTATATGGCATTTT
CGCATTAACCGATGAAACCTATAGCATAACTTGTACGAGTGAGGGTAAGAAGCTGACAGGAGCTGAGATTAGCCTGCTGC
AAGTTATTAGTCATTTATGGTGGGTCGGCGCCACGTTAATCGGCGCGCTTATTGGCACTTTGATCCCTCCTGAAATAACA
GGGTTTGAGTTTGCCTTAACCGCTATGTTTGTGACATTGGCTATCGATGCAGTGCGTCACACTGTGGATAATAAGCTCAT
CACATATGCTGTCATTTCGAGTGTCTTTGGGGTCTTGATGGAGTATTACGTCGTTAATAATGCATTTTTAGCGGCTGGTT
TAATTTGTTATCTAAGCTTAATCAGTAAAGATTATATTTACTCTAGAGAAGAGGCGATCATTAATGATATCTGA

Upstream 100 bases:

>100_bases
TATGCAACGGGCAATTTCAGGTTGAATGAACCCGTTATCTCAATGTCATTGATAATTTTGTCTTTATTTCGTGGGTGTTA
AATCTTTTTTATTCAGCTAG

Downstream 100 bases:

>100_bases
TACGCATGTGCTTTGGGTGATACTAACTGTATCTGCGGTCACTATGGGATTACGACTCGCCCCTTTTATTTTGATGGCTC
AGTTGTCTGATAACCAATAT

Product: AzlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIVVNINRIFYIAKLTIPIATAYVPLGLALGVFMVSSGVQWFWAPVAALVIFAGSIEFLVVSFILAGLPLATVAWTTLIV
NFRHIFYGLSFPLKSLRTPLQKLYGIFALTDETYSITCTSEGKKLTGAEISLLQVISHLWWVGATLIGALIGTLIPPEIT
GFEFALTAMFVTLAIDAVRHTVDNKLITYAVISSVFGVLMEYYVVNNAFLAAGLICYLSLISKDYIYSREEAIINDI

Sequences:

>Translated_237_residues
MIVVNINRIFYIAKLTIPIATAYVPLGLALGVFMVSSGVQWFWAPVAALVIFAGSIEFLVVSFILAGLPLATVAWTTLIV
NFRHIFYGLSFPLKSLRTPLQKLYGIFALTDETYSITCTSEGKKLTGAEISLLQVISHLWWVGATLIGALIGTLIPPEIT
GFEFALTAMFVTLAIDAVRHTVDNKLITYAVISSVFGVLMEYYVVNNAFLAAGLICYLSLISKDYIYSREEAIINDI
>Mature_237_residues
MIVVNINRIFYIAKLTIPIATAYVPLGLALGVFMVSSGVQWFWAPVAALVIFAGSIEFLVVSFILAGLPLATVAWTTLIV
NFRHIFYGLSFPLKSLRTPLQKLYGIFALTDETYSITCTSEGKKLTGAEISLLQVISHLWWVGATLIGALIGTLIPPEIT
GFEFALTAMFVTLAIDAVRHTVDNKLITYAVISSVFGVLMEYYVVNNAFLAAGLICYLSLISKDYIYSREEAIINDI

Specific function: Involved in branched-chain amino acid transport [H]

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 26015; Mature: 26015

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVNINRIFYIAKLTIPIATAYVPLGLALGVFMVSSGVQWFWAPVAALVIFAGSIEFLV
CEEEEEHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
VSFILAGLPLATVAWTTLIVNFRHIFYGLSFPLKSLRTPLQKLYGIFALTDETYSITCTS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCEEEEEEC
EGKKLTGAEISLLQVISHLWWVGATLIGALIGTLIPPEITGFEFALTAMFVTLAIDAVRH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TVDNKLITYAVISSVFGVLMEYYVVNNAFLAAGLICYLSLISKDYIYSREEAIINDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVVNINRIFYIAKLTIPIATAYVPLGLALGVFMVSSGVQWFWAPVAALVIFAGSIEFLV
CEEEEEHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
VSFILAGLPLATVAWTTLIVNFRHIFYGLSFPLKSLRTPLQKLYGIFALTDETYSITCTS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCEEEEEEC
EGKKLTGAEISLLQVISHLWWVGATLIGALIGTLIPPEITGFEFALTAMFVTLAIDAVRH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TVDNKLITYAVISSVFGVLMEYYVVNNAFLAAGLICYLSLISKDYIYSREEAIINDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377 [H]