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The map label for this gene is aspC [H]

Identifier: 126176434

GI number: 126176434

Start: 4974941

End: 4976023

Strand: Reverse

Name: aspC [H]

Synonym: Sbal_4249

Alternate gene names: 126176434

Gene position: 4976023-4974941 (Counterclockwise)

Preceding gene: 126176435

Following gene: 126176433

Centisome position: 97.05

GC content: 38.32

Gene sequence:

>1083_bases
ATGTCAATTGCCAATTATACTATTCAAGAATGGTTATTTAATGAAGCTAAAGGTAAATTTAAATACGATCTTGCCGAGAG
TGGTGTTCAATTTCAATATGTAAAAGATCTCAGTATCGATGATAATTGGTGTTTAGATTATAGCTATGACCGCGGATGTG
AAGATCTGAGGGAATTAATCAAATCCCAGTATACAAGCGATACCGCCTCACTCAATGCGGTTGTTACTCACGGTGCACAA
GAAGCATTATATATTTTTTATCGTACACTGCTCAGCTCAGGAGATCATGTTATTGCCACTTCACCTGGCTGGCAGCAAGC
TTGGGAAGTACCAAGAAGTATCAACTGTGATGTCAGCTTACTCGAATGGCTTCCGGGTGAAGCGTTTCCAATTGAAGAGT
TAGAAAGGTCAATCACGGCACAAACCAAACTGTTAGTGCTAAATAGTCATTGTAATCCAACAGGTGCAATACTCAGTGAT
CAAGAATGGCAAAATATTATATCCTTATGTAAACGTAAAAATATTTGGATTGTGAACGATGAAGAATATTTACTAGATTT
TTCAGGTTCAATCATTAATAAATATAAATTGTCGTTATCTGTATCCAGTCTCTCCAAAATATATGGATTACCCGCCTTAA
GGCTTGGATGGGCTGTATCGAATAACGATAAGATTATTGAGGATATGGTTAACTATAAGCGTTATACCTCGGTATGTAAT
TCACTGCTCTTGGAAAATATAGCCAAGAAAGTATTGTCAGAAAAAGAAATGCATATTAAGAGATTCCGTAATTATCTTAA
TATTGGCCGTCCCTTGCTCGATAAGTTTGCCGAATTGGCGAAAGATCACTTAGAGTTGATCCCGCCTAATCAAACGCCTT
ACGCCTGGTTTAATACCAAAAATGCGGTCGATTCAGCAAAGCTTGTCAGGATAATACTGGAAAAGCATCAGCTTTTGGTG
ATGCCAGCAGAGGTGTTTGGAACAAAAAATGGTATTAGACTGACCTATGCCCGTGACGAGCAATTGCTCAGGACATGTTT
AAATATGATATTGGATACATTGGGCGTGAGTGAGCGTCTCTAG

Upstream 100 bases:

>100_bases
GAGAAGTTGAACATTACGTCACACCAATGACACCTAAATTACCAGGTGCAGCTCATCGCGATATTTTTGTTATCACTATC
TCTCATATCAAGGAGTAATA

Downstream 100 bases:

>100_bases
GTTATGCAACGGGCAATTTCAGGTTGAATGAACCCGTTATCTCAATGTCATTGATAATTTTGTCTTTATTTCGTGGGTGT
TAAATCTTTTTTATTCAGCT

Product: aminotransferase, class I and II

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSIANYTIQEWLFNEAKGKFKYDLAESGVQFQYVKDLSIDDNWCLDYSYDRGCEDLRELIKSQYTSDTASLNAVVTHGAQ
EALYIFYRTLLSSGDHVIATSPGWQQAWEVPRSINCDVSLLEWLPGEAFPIEELERSITAQTKLLVLNSHCNPTGAILSD
QEWQNIISLCKRKNIWIVNDEEYLLDFSGSIINKYKLSLSVSSLSKIYGLPALRLGWAVSNNDKIIEDMVNYKRYTSVCN
SLLLENIAKKVLSEKEMHIKRFRNYLNIGRPLLDKFAELAKDHLELIPPNQTPYAWFNTKNAVDSAKLVRIILEKHQLLV
MPAEVFGTKNGIRLTYARDEQLLRTCLNMILDTLGVSERL

Sequences:

>Translated_360_residues
MSIANYTIQEWLFNEAKGKFKYDLAESGVQFQYVKDLSIDDNWCLDYSYDRGCEDLRELIKSQYTSDTASLNAVVTHGAQ
EALYIFYRTLLSSGDHVIATSPGWQQAWEVPRSINCDVSLLEWLPGEAFPIEELERSITAQTKLLVLNSHCNPTGAILSD
QEWQNIISLCKRKNIWIVNDEEYLLDFSGSIINKYKLSLSVSSLSKIYGLPALRLGWAVSNNDKIIEDMVNYKRYTSVCN
SLLLENIAKKVLSEKEMHIKRFRNYLNIGRPLLDKFAELAKDHLELIPPNQTPYAWFNTKNAVDSAKLVRIILEKHQLLV
MPAEVFGTKNGIRLTYARDEQLLRTCLNMILDTLGVSERL
>Mature_359_residues
SIANYTIQEWLFNEAKGKFKYDLAESGVQFQYVKDLSIDDNWCLDYSYDRGCEDLRELIKSQYTSDTASLNAVVTHGAQE
ALYIFYRTLLSSGDHVIATSPGWQQAWEVPRSINCDVSLLEWLPGEAFPIEELERSITAQTKLLVLNSHCNPTGAILSDQ
EWQNIISLCKRKNIWIVNDEEYLLDFSGSIINKYKLSLSVSSLSKIYGLPALRLGWAVSNNDKIIEDMVNYKRYTSVCNS
LLLENIAKKVLSEKEMHIKRFRNYLNIGRPLLDKFAELAKDHLELIPPNQTPYAWFNTKNAVDSAKLVRIILEKHQLLVM
PAEVFGTKNGIRLTYARDEQLLRTCLNMILDTLGVSERL

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4507369, Length=210, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17567369, Length=212, Percent_Identity=27.3584905660377, Blast_Score=71, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6322401, Length=255, Percent_Identity=26.2745098039216, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28573069, Length=230, Percent_Identity=24.7826086956522, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24646114, Length=230, Percent_Identity=24.7826086956522, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28573067, Length=230, Percent_Identity=24.7826086956522, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28573065, Length=230, Percent_Identity=24.7826086956522, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 41246; Mature: 41114

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIANYTIQEWLFNEAKGKFKYDLAESGVQFQYVKDLSIDDNWCLDYSYDRGCEDLRELI
CCCCHHHHHHHHHHHCCCCEEEEHHHCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHH
KSQYTSDTASLNAVVTHGAQEALYIFYRTLLSSGDHVIATSPGWQQAWEVPRSINCDVSL
HHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCHHH
LEWLPGEAFPIEELERSITAQTKLLVLNSHCNPTGAILSDQEWQNIISLCKRKNIWIVND
HHHCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEECC
EEYLLDFSGSIINKYKLSLSVSSLSKIYGLPALRLGWAVSNNDKIIEDMVNYKRYTSVCN
CCEEEECCCCHHHHEEEEEEHHHHHHHHCCCHHHCCEEECCCCHHHHHHHHHHHHHHHHH
SLLLENIAKKVLSEKEMHIKRFRNYLNIGRPLLDKFAELAKDHLELIPPNQTPYAWFNTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCEEEECCC
NAVDSAKLVRIILEKHQLLVMPAEVFGTKNGIRLTYARDEQLLRTCLNMILDTLGVSERL
CHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SIANYTIQEWLFNEAKGKFKYDLAESGVQFQYVKDLSIDDNWCLDYSYDRGCEDLRELI
CCCHHHHHHHHHHHCCCCEEEEHHHCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHH
KSQYTSDTASLNAVVTHGAQEALYIFYRTLLSSGDHVIATSPGWQQAWEVPRSINCDVSL
HHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCHHH
LEWLPGEAFPIEELERSITAQTKLLVLNSHCNPTGAILSDQEWQNIISLCKRKNIWIVND
HHHCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEECC
EEYLLDFSGSIINKYKLSLSVSSLSKIYGLPALRLGWAVSNNDKIIEDMVNYKRYTSVCN
CCEEEECCCCHHHHEEEEEEHHHHHHHHCCCHHHCCEEECCCCHHHHHHHHHHHHHHHHH
SLLLENIAKKVLSEKEMHIKRFRNYLNIGRPLLDKFAELAKDHLELIPPNQTPYAWFNTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCEEEECCC
NAVDSAKLVRIILEKHQLLVMPAEVFGTKNGIRLTYARDEQLLRTCLNMILDTLGVSERL
CHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]