Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is yqjC [C]

Identifier: 126176424

GI number: 126176424

Start: 4966026

End: 4966418

Strand: Reverse

Name: yqjC [C]

Synonym: Sbal_4239

Alternate gene names: 126176424

Gene position: 4966418-4966026 (Counterclockwise)

Preceding gene: 126176426

Following gene: 126176422

Centisome position: 96.86

GC content: 49.36

Gene sequence:

>393_bases
ATGCAGATTAAACATGGAATTTATGGCGTCGTTATTAGCTTGGCATTGAGCGCGACAGCATGGGCCGATGAAACCCCTAA
AGTGGGCTGCGCGGCGAAGTTAGAAGCCATCAGTGCCGAACTTGCCCAAGCGAAAGCGGCGGGCAATAAGCATAAAGTTG
ACGGGCTCGAAAAGGCCTATTACGAAGTCTCAACCCATTGTGATGACGACAGCTTATATGCCGAGCGCGTCGCTAAAGTT
GCGGCCTTAGAAGAAAAACTGACTGAGCGCCAAAACGAGTTGGCTAAAGCCATAGAAGAAGGTCGTTCTATGGATAAAAT
CAATAAGAAACGCAATAAGGTTGCCGCAGCGGAATTGGAGCTTGCTAAGGCGCGAGCCGAGCTAACCCAATAA

Upstream 100 bases:

>100_bases
CAGATTGAGCTCACTGAGTGTGGCACTATATTGATAGCGCGGTGACAGGACACAGTCAGATAGCGGCAATGATCAATGAA
TTAAGCGTGAGGAGATTAAT

Downstream 100 bases:

>100_bases
GTCGCCTAGGCTCAGTCGTTTGGATAAGCATTAGGCTTAGCCCGCGTAACCTATGCTCAAAACTGTGGATTCTGTACTGG
AGTTATAGCCCGCGCTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAYYEVSTHCDDDSLYAERVAKV
AALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELELAKARAELTQ

Sequences:

>Translated_130_residues
MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAYYEVSTHCDDDSLYAERVAKV
AALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELELAKARAELTQ
>Mature_130_residues
MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAYYEVSTHCDDDSLYAERVAKV
AALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELELAKARAELTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082209, Length=124, Percent_Identity=36.2903225806452, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14111; Mature: 14111

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAY
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
YEVSTHCDDDSLYAERVAKVAALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LAKARAELTQ
HHHHHHHHCC
>Mature Secondary Structure
MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAY
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
YEVSTHCDDDSLYAERVAKVAALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LAKARAELTQ
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA