| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yqjC [C]
Identifier: 126176424
GI number: 126176424
Start: 4966026
End: 4966418
Strand: Reverse
Name: yqjC [C]
Synonym: Sbal_4239
Alternate gene names: 126176424
Gene position: 4966418-4966026 (Counterclockwise)
Preceding gene: 126176426
Following gene: 126176422
Centisome position: 96.86
GC content: 49.36
Gene sequence:
>393_bases ATGCAGATTAAACATGGAATTTATGGCGTCGTTATTAGCTTGGCATTGAGCGCGACAGCATGGGCCGATGAAACCCCTAA AGTGGGCTGCGCGGCGAAGTTAGAAGCCATCAGTGCCGAACTTGCCCAAGCGAAAGCGGCGGGCAATAAGCATAAAGTTG ACGGGCTCGAAAAGGCCTATTACGAAGTCTCAACCCATTGTGATGACGACAGCTTATATGCCGAGCGCGTCGCTAAAGTT GCGGCCTTAGAAGAAAAACTGACTGAGCGCCAAAACGAGTTGGCTAAAGCCATAGAAGAAGGTCGTTCTATGGATAAAAT CAATAAGAAACGCAATAAGGTTGCCGCAGCGGAATTGGAGCTTGCTAAGGCGCGAGCCGAGCTAACCCAATAA
Upstream 100 bases:
>100_bases CAGATTGAGCTCACTGAGTGTGGCACTATATTGATAGCGCGGTGACAGGACACAGTCAGATAGCGGCAATGATCAATGAA TTAAGCGTGAGGAGATTAAT
Downstream 100 bases:
>100_bases GTCGCCTAGGCTCAGTCGTTTGGATAAGCATTAGGCTTAGCCCGCGTAACCTATGCTCAAAACTGTGGATTCTGTACTGG AGTTATAGCCCGCGCTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAYYEVSTHCDDDSLYAERVAKV AALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELELAKARAELTQ
Sequences:
>Translated_130_residues MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAYYEVSTHCDDDSLYAERVAKV AALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELELAKARAELTQ >Mature_130_residues MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAYYEVSTHCDDDSLYAERVAKV AALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELELAKARAELTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082209, Length=124, Percent_Identity=36.2903225806452, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14111; Mature: 14111
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAY CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH YEVSTHCDDDSLYAERVAKVAALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LAKARAELTQ HHHHHHHHCC >Mature Secondary Structure MQIKHGIYGVVISLALSATAWADETPKVGCAAKLEAISAELAQAKAAGNKHKVDGLEKAY CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH YEVSTHCDDDSLYAERVAKVAALEEKLTERQNELAKAIEEGRSMDKINKKRNKVAAAELE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LAKARAELTQ HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA