| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yneN [H]
Identifier: 126176260
GI number: 126176260
Start: 4780257
End: 4781324
Strand: Direct
Name: yneN [H]
Synonym: Sbal_4074
Alternate gene names: 126176260
Gene position: 4780257-4781324 (Clockwise)
Preceding gene: 126176259
Following gene: 126176261
Centisome position: 93.23
GC content: 43.16
Gene sequence:
>1068_bases ATGACAACCGGCTTTAATACCTTGTTAAAAACACCATTGATCGCATTGTTATGTTTATTTACCTTGGCTCAAGTGGCCCA TGGCGCAGACGACGATTATTCGGCCGAGGGTGAACGAAGAGCTAAAGCAGCTGGGGAGTCCTTGGTTGGCACACCAGCCC CTCAGATGAAGATGACAACCATTGATGGTAAGGCGATTGATCTTGCTGATTTGTATGGTAAGAAGCCGGTTTATATTAAG TTCTGGGCAACCTGGTGTGTCCCGTGCCGTGAACAAATGCCGAGCTTTGAAGATATCTACAAAAAGTACGGTGACAAGGT TGAAGTCATTGCGGTGAACACAGGTATCAGCGATAACATAAAATCTGTCACCGAGTTTAGTCAAAAAATGGGCTTGACCA TGCCCATTACTATTGATGATGGCAAGCTAGCACGTGCGTTCCACTTACGTGTTACCCCTCAACATTTATTGATTGATAAA AATGGTAAATTTGCTTATTTCGGTCATAAGGATGATAAAGAGTTCCATCAGGCTTTGGATAGAGTAGTCGCTGAAAAAGC GACAGGTAAACCTTTACATAATCCGACCTTTGTAGCGAAAGATTCAGGTTATAACTTGGGCGATACAGTGCCTGATCTTG CTTTTTCTACCATTGACGAAAAGCCGCTTAATATTCAATTTAATACCGCCAGCAGTAAAAAAGTGGTCGCGGTATTCTTT GGCCCTTGGTGTGAGTGGTATTTGGAAACAACAGAGCCTAAGACGTCGCAGGCTTGTACTCGGGTGCGTGAGCTGTTGGA GAAAAAATCGCAAGCATCCACAGTGCAATGGGTAACGGTTTCGACCAACTTATGGTCATCAGTTGCTGAGCTTAAGGATT ATCGTAAGAGTTATGGCACGACTATGCCAATCGTGTTTGATCGCGATGGTGAGTTGTTCAAGCAATTTGGTGTTAACCAA GTACCAAGCATTAGTTTAATCGACGCTGACGGTAAGGTTATCCTAAAATCCTCGATTCAAGATGATGATTTTGATGCCGT TTTACACACGATTTCAGCATTAAAATAA
Upstream 100 bases:
>100_bases AACTGTCTCTACGGCCATTTAATTCATGACCTTTTGGCCCAGGGACACTCAGGCTAATAGGTATCTTACGCTTTCAGTAA AAAATGATAGGAAAATTGTT
Downstream 100 bases:
>100_bases CCCCTTCATCTTGATAATAAAGGCGTGACATGAAACGTTTAGCTCAGTTTATAACAGGATTTATTATCCTAATATGTTCG TTGCAAGTTATGGCCAATGA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTTGFNTLLKTPLIALLCLFTLAQVAHGADDDYSAEGERRAKAAGESLVGTPAPQMKMTTIDGKAIDLADLYGKKPVYIK FWATWCVPCREQMPSFEDIYKKYGDKVEVIAVNTGISDNIKSVTEFSQKMGLTMPITIDDGKLARAFHLRVTPQHLLIDK NGKFAYFGHKDDKEFHQALDRVVAEKATGKPLHNPTFVAKDSGYNLGDTVPDLAFSTIDEKPLNIQFNTASSKKVVAVFF GPWCEWYLETTEPKTSQACTRVRELLEKKSQASTVQWVTVSTNLWSSVAELKDYRKSYGTTMPIVFDRDGELFKQFGVNQ VPSISLIDADGKVILKSSIQDDDFDAVLHTISALK
Sequences:
>Translated_355_residues MTTGFNTLLKTPLIALLCLFTLAQVAHGADDDYSAEGERRAKAAGESLVGTPAPQMKMTTIDGKAIDLADLYGKKPVYIK FWATWCVPCREQMPSFEDIYKKYGDKVEVIAVNTGISDNIKSVTEFSQKMGLTMPITIDDGKLARAFHLRVTPQHLLIDK NGKFAYFGHKDDKEFHQALDRVVAEKATGKPLHNPTFVAKDSGYNLGDTVPDLAFSTIDEKPLNIQFNTASSKKVVAVFF GPWCEWYLETTEPKTSQACTRVRELLEKKSQASTVQWVTVSTNLWSSVAELKDYRKSYGTTMPIVFDRDGELFKQFGVNQ VPSISLIDADGKVILKSSIQDDDFDAVLHTISALK >Mature_354_residues TTGFNTLLKTPLIALLCLFTLAQVAHGADDDYSAEGERRAKAAGESLVGTPAPQMKMTTIDGKAIDLADLYGKKPVYIKF WATWCVPCREQMPSFEDIYKKYGDKVEVIAVNTGISDNIKSVTEFSQKMGLTMPITIDDGKLARAFHLRVTPQHLLIDKN GKFAYFGHKDDKEFHQALDRVVAEKATGKPLHNPTFVAKDSGYNLGDTVPDLAFSTIDEKPLNIQFNTASSKKVVAVFFG PWCEWYLETTEPKTSQACTRVRELLEKKSQASTVQWVTVSTNLWSSVAELKDYRKSYGTTMPIVFDRDGELFKQFGVNQV PSISLIDADGKVILKSSIQDDDFDAVLHTISALK
Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 39481; Mature: 39350
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGFNTLLKTPLIALLCLFTLAQVAHGADDDYSAEGERRAKAAGESLVGTPAPQMKMTT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEE IDGKAIDLADLYGKKPVYIKFWATWCVPCREQMPSFEDIYKKYGDKVEVIAVNTGISDNI ECCCEEEHHHHHCCCCEEEEEEEECCCHHHHHCCCHHHHHHHHCCEEEEEEEECCCCCHH KSVTEFSQKMGLTMPITIDDGKLARAFHLRVTPQHLLIDKNGKFAYFGHKDDKEFHQALD HHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCEEEEECCCCEEEECCCCCHHHHHHHH RVVAEKATGKPLHNPTFVAKDSGYNLGDTVPDLAFSTIDEKPLNIQFNTASSKKVVAVFF HHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEEEE GPWCEWYLETTEPKTSQACTRVRELLEKKSQASTVQWVTVSTNLWSSVAELKDYRKSYGT CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHCC TMPIVFDRDGELFKQFGVNQVPSISLIDADGKVILKSSIQDDDFDAVLHTISALK CCCEEECCCHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TTGFNTLLKTPLIALLCLFTLAQVAHGADDDYSAEGERRAKAAGESLVGTPAPQMKMTT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEE IDGKAIDLADLYGKKPVYIKFWATWCVPCREQMPSFEDIYKKYGDKVEVIAVNTGISDNI ECCCEEEHHHHHCCCCEEEEEEEECCCHHHHHCCCHHHHHHHHCCEEEEEEEECCCCCHH KSVTEFSQKMGLTMPITIDDGKLARAFHLRVTPQHLLIDKNGKFAYFGHKDDKEFHQALD HHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCEEEEECCCCEEEECCCCCHHHHHHHH RVVAEKATGKPLHNPTFVAKDSGYNLGDTVPDLAFSTIDEKPLNIQFNTASSKKVVAVFF HHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEEEE GPWCEWYLETTEPKTSQACTRVRELLEKKSQASTVQWVTVSTNLWSSVAELKDYRKSYGT CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHCC TMPIVFDRDGELFKQFGVNQVPSISLIDADGKVILKSSIQDDDFDAVLHTISALK CCCEEECCCHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]