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The map label for this gene is ycaQ [H]

Identifier: 126176202

GI number: 126176202

Start: 4715072

End: 4716241

Strand: Reverse

Name: ycaQ [H]

Synonym: Sbal_4016

Alternate gene names: 126176202

Gene position: 4716241-4715072 (Counterclockwise)

Preceding gene: 126176207

Following gene: 126176198

Centisome position: 91.98

GC content: 48.63

Gene sequence:

>1170_bases
ATGTCGAATCCCTTTTCACCCCGCGAATGGCTGCAATTAACGATGCAGCAGCAAGGATTATTACAGCCACAGACTTCGGT
GGCTGAGACTGTCTTGCGCCTAAGTTATGTGCAAATCGACTCGATTAACGTGGTTGAGCGTGCGCATCACCATGTGTTGC
ATAGCCGTATGCCCGGATACCAGCCGAAGATGCTCGATTCGGCTTTGGCTAAAGGTGAGATTTTCGAATATTGGTCCCAT
GCGGCGGCCTATTTACCGATCGCCGATTACCGTTTTAGTTTGCAACGTAAACTGCTGCAAAATGGCGGTAAGCATTGGTT
TGAGCCCGACGATAAAGTAATGCAAGAAGTGCGGGCACGAATCCTTGCAGAAGGGCCACTCAAGGCCAGTGATTTTGAAC
ACAGTGAAGGTAAAAACGGTGCCTGGTGGGATTGGAAACCCGCGAAAAAAGCCCTAGAGCAGCTCTTTATGCGTGGTGAG
CTGATGGTGGTGCGGCGAGAGAAATTCCAGAAGGTTTACGATCTTACTGCGCGGGTGTTACCACAAGACATAAATGCCAA
AGCACCGACAGAGGCTGAATTTACCCGCTATCTGATTGATCGTTATCTCGATGCCCATGCCTTTGGTACTGCGGCGCAAA
TAGCTTATCTACGCAAAGGCTTAAAATCAGCAGTAGCCCAAGAGCTGGCAGAGATGCTGTCACAGGGGGGATTAGCGAGT
TTTAAGGCGGCGGGGCAAAGCTACTTTTACTACCCTGCATTACAGCTCCATGCGCCATTACCCAATAAAGTCTGGCTGCT
AAATCCCTTCGATAATTTATTAATCCAACGGCAACGGCTAAAGCAATGGTTTGATTTTGATTATCAAATTGAAGTCTATG
TGCCCGCCGAAAAGCGTCGGTATGGTTATTATTCTTTAGCGATTCTGTGGCGCGATACTTTTGTCGGCCGCGTGGATGTG
AAAGCCGATCGCCAAACGGGCATCTTGTTATTGCAGCAATTGACCTTAGAAGCGGGCGTGATGGTGAATGGCCTAGATGA
GGATTTCTGTGCTGCGTTTGACACCGCCATCAGGGAGTATGCCCGCTTTAACGGTTGCGATCGCTGGAAGTTAGTTAAAG
CAAATCATAAAGGCCTTAAGCAGAAGTATGCTCGCCAACAAAAGTGTTAG

Upstream 100 bases:

>100_bases
GGAACACTCGCAAAATAATAAGTACATCAGCTTTATTTTCAGTATTTTAAGTTTATCTATTGAGCCTGAAGTTTTGCCGG
TCGTTGCGTTAGGAGACTTG

Downstream 100 bases:

>100_bases
TCATCAGTCGCTTTAATTGGAATGTCCATAAAGCGAAAGCAGCCATAGAGAAAAATGAGATACAGCAGTGGCAAGGCTGC
GGTGACTAAGGGTGACGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSNPFSPREWLQLTMQQQGLLQPQTSVAETVLRLSYVQIDSINVVERAHHHVLHSRMPGYQPKMLDSALAKGEIFEYWSH
AAAYLPIADYRFSLQRKLLQNGGKHWFEPDDKVMQEVRARILAEGPLKASDFEHSEGKNGAWWDWKPAKKALEQLFMRGE
LMVVRREKFQKVYDLTARVLPQDINAKAPTEAEFTRYLIDRYLDAHAFGTAAQIAYLRKGLKSAVAQELAEMLSQGGLAS
FKAAGQSYFYYPALQLHAPLPNKVWLLNPFDNLLIQRQRLKQWFDFDYQIEVYVPAEKRRYGYYSLAILWRDTFVGRVDV
KADRQTGILLLQQLTLEAGVMVNGLDEDFCAAFDTAIREYARFNGCDRWKLVKANHKGLKQKYARQQKC

Sequences:

>Translated_389_residues
MSNPFSPREWLQLTMQQQGLLQPQTSVAETVLRLSYVQIDSINVVERAHHHVLHSRMPGYQPKMLDSALAKGEIFEYWSH
AAAYLPIADYRFSLQRKLLQNGGKHWFEPDDKVMQEVRARILAEGPLKASDFEHSEGKNGAWWDWKPAKKALEQLFMRGE
LMVVRREKFQKVYDLTARVLPQDINAKAPTEAEFTRYLIDRYLDAHAFGTAAQIAYLRKGLKSAVAQELAEMLSQGGLAS
FKAAGQSYFYYPALQLHAPLPNKVWLLNPFDNLLIQRQRLKQWFDFDYQIEVYVPAEKRRYGYYSLAILWRDTFVGRVDV
KADRQTGILLLQQLTLEAGVMVNGLDEDFCAAFDTAIREYARFNGCDRWKLVKANHKGLKQKYARQQKC
>Mature_388_residues
SNPFSPREWLQLTMQQQGLLQPQTSVAETVLRLSYVQIDSINVVERAHHHVLHSRMPGYQPKMLDSALAKGEIFEYWSHA
AAYLPIADYRFSLQRKLLQNGGKHWFEPDDKVMQEVRARILAEGPLKASDFEHSEGKNGAWWDWKPAKKALEQLFMRGEL
MVVRREKFQKVYDLTARVLPQDINAKAPTEAEFTRYLIDRYLDAHAFGTAAQIAYLRKGLKSAVAQELAEMLSQGGLASF
KAAGQSYFYYPALQLHAPLPNKVWLLNPFDNLLIQRQRLKQWFDFDYQIEVYVPAEKRRYGYYSLAILWRDTFVGRVDVK
ADRQTGILLLQQLTLEAGVMVNGLDEDFCAAFDTAIREYARFNGCDRWKLVKANHKGLKQKYARQQKC

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=351, Percent_Identity=35.6125356125356, Blast_Score=191, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 45029; Mature: 44898

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCEEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNPFSPREWLQLTMQQQGLLQPQTSVAETVLRLSYVQIDSINVVERAHHHVLHSRMPGY
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCC
QPKMLDSALAKGEIFEYWSHAAAYLPIADYRFSLQRKLLQNGGKHWFEPDDKVMQEVRAR
CHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
ILAEGPLKASDFEHSEGKNGAWWDWKPAKKALEQLFMRGELMVVRREKFQKVYDLTARVL
HHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHC
PQDINAKAPTEAEFTRYLIDRYLDAHAFGTAAQIAYLRKGLKSAVAQELAEMLSQGGLAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
FKAAGQSYFYYPALQLHAPLPNKVWLLNPFDNLLIQRQRLKQWFDFDYQIEVYVPAEKRR
HHHCCCCEEEECEEEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECHHHCC
YGYYSLAILWRDTFVGRVDVKADRQTGILLLQQLTLEAGVMVNGLDEDFCAAFDTAIREY
CCEEEEEEEEHHHHCEEEEECCCCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHH
ARFNGCDRWKLVKANHKGLKQKYARQQKC
HHCCCCCCEEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]