| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is fliE [H]
Identifier: 126176168
GI number: 126176168
Start: 4669113
End: 4669451
Strand: Reverse
Name: fliE [H]
Synonym: Sbal_3980
Alternate gene names: 126176168
Gene position: 4669451-4669113 (Counterclockwise)
Preceding gene: 126176169
Following gene: 126176167
Centisome position: 91.07
GC content: 42.77
Gene sequence:
>339_bases ATGTCTAATGGAGCGATTGGTAGCTCAAATATGTTGATGGAAACCTTAAATATTCATCGTGAAGTGGCTAAAGGTGCGAT CAACATCACTTCAAATCCAGCCGACAATGGTATGGCTTATGGTTCATTCACTGAGCTAATTAAGAGTAAAGTTTCTGCCG TTAACCAAGACCAGAATCAATCCTCTATGGCGATGGCTGCTGTCGATAGTGGTAAGAGTGATGACCTCGTCGGTGCCATG GTTGCTTCGCAAAAGGCCAGTTTGTCCTTTGCGACTATGCTCCAAATTCGTAATCGTCTTGTGCAAGCATTTGACGATGT AATGAAGATGCCTATTTAA
Upstream 100 bases:
>100_bases TTAAGATATCGCCTCGTGCAAATGCGAGAAGCAGGGATTGATATTGAAACGTTATTAGATCAAGCAGCGTGAGCAATCAA AAAAGTAATAGGAATGGAAT
Downstream 100 bases:
>100_bases GGAATTGTGTGAATGTCTACCACTTTTGTTCAATCAGGTCAGGATATTACCGGGACTGAATCTTCGTCAGGATTCATTGC TGGCATGACCCAAAAATGGC
Product: flagellar hook-basal body complex subunit FliE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSNGAIGSSNMLMETLNIHREVAKGAINITSNPADNGMAYGSFTELIKSKVSAVNQDQNQSSMAMAAVDSGKSDDLVGAM VASQKASLSFATMLQIRNRLVQAFDDVMKMPI
Sequences:
>Translated_112_residues MSNGAIGSSNMLMETLNIHREVAKGAINITSNPADNGMAYGSFTELIKSKVSAVNQDQNQSSMAMAAVDSGKSDDLVGAM VASQKASLSFATMLQIRNRLVQAFDDVMKMPI >Mature_111_residues SNGAIGSSNMLMETLNIHREVAKGAINITSNPADNGMAYGSFTELIKSKVSAVNQDQNQSSMAMAAVDSGKSDDLVGAMV ASQKASLSFATMLQIRNRLVQAFDDVMKMPI
Specific function: Unknown
COG id: COG1677
COG function: function code NU; Flagellar hook-basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001624 [H]
Pfam domain/function: PF02049 FliE [H]
EC number: NA
Molecular weight: Translated: 11888; Mature: 11757
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.9 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.1 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNGAIGSSNMLMETLNIHREVAKGAINITSNPADNGMAYGSFTELIKSKVSAVNQDQNQ CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC SSMAMAAVDSGKSDDLVGAMVASQKASLSFATMLQIRNRLVQAFDDVMKMPI HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNGAIGSSNMLMETLNIHREVAKGAINITSNPADNGMAYGSFTELIKSKVSAVNQDQNQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC SSMAMAAVDSGKSDDLVGAMVASQKASLSFATMLQIRNRLVQAFDDVMKMPI HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA