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The map label for this gene is fliF [H]

Identifier: 126176167

GI number: 126176167

Start: 4667424

End: 4669100

Strand: Reverse

Name: fliF [H]

Synonym: Sbal_3979

Alternate gene names: 126176167

Gene position: 4669100-4667424 (Counterclockwise)

Preceding gene: 126176168

Following gene: 126176166

Centisome position: 91.06

GC content: 46.03

Gene sequence:

>1677_bases
ATGTCTACCACTTTTGTTCAATCAGGTCAGGATATTACCGGGACTGAATCTTCGTCAGGATTCATTGCTGGCATGACCCA
AAAATGGCATCGTTTTAACCGTGGTGATCGTCAGGTCATAGCATTAGCTTTACTCGCTGTGGTTGTAGCTAGTGTCATAG
TGCTGATGTTATGGACGGCAACGGCGGGTTACCGACCTTTATATGGTAGCCAAGAAAATGTTGATACTTCTCAGGTTTTA
AATGTTTTAGATGCAGAAGGCATTGATTATCGCCTCGATGCGAATTCTGGTGCTGTACTCGTTGCAGAAGAGCAAGTGGG
TAATGCTCGTATGATCTTGGCCGCCAAAGGCGTTAAAGCTAAGGTGCCTTCTGGCATGGAGGCTCTTGATAATACCGCCC
TCGGTACGAGCCAATTTATGGAGCAAGCCAAATATCGCAATAGCTTAGAAGGTGAATTGGCTCGAACCATAATGTCGTTA
AAGTTAGTTCGTGCTGCAAGAGTTCATTTGGCGATACCTAAACAAACTCTGTTTATCCGTCAGGAGCCTGAACTGCCTAC
CGCTTCTGTGATGTTGCAGTTAGATCCCAATACTCGACTCTCTGAGTCACAGGTTGAGGCGATTGTTAATTTAGTCGCAG
GGAGTGTCACTGGACTCACGGCAAGTAATATCAAGGTTGTCGATCAAGATGGCCGATATTTAAGTGAGAACATTTCAGGT
AATCAAGATCTTAGCCAGTCTAGGAATAAGCAATTACAGTACACGCGTGAACTTGAAAATAGTCTAGTGGCCAATGCCTC
TTCTATGCTCGAGCCTGTGCTTGGGCAAGAAAACTTCCAAGTACGGGTAACGGCAAAAGTAAACTTTAACCAAGTTGAAG
AAACCAAGGAGTCACTCGATCCACAAAATGTCGTGACTCAAGAACGTACCAGTGTCGATGATTCAAGCAATAGTATTGCC
GCGGGTATTCCAGGAGCATTAAGTAATAAGCCACCCCAGGCAGGCAAAGCGGCAGCGGATGACAAAACCCGTAATTTGAA
ACAGGAAGAAAGTCGTCAATATGACGTGGGTCGCTCTGTACGTCATGTCCGTTATCAACAAATGCAGCTCGAAAATCTCT
CTGTCTCAGTGCTTATTAATAGTGCGACAAGCCAAGGAGCATTCAATGATGAGGCTCAACTCGCTAAGTTTGGCAATATG
GTCAAGGATGCTATCGGTTTCTCGGCGGCGAGAGGTGATAGTTTTACCATTAATGCCTTTGAGTTTACCCCAACTGTTAC
AGCGGAATTTACGCCGTCACCTTGGTGGCAATCAGAAAATTACCAAGCTTATTTACGCTACATCATTGGCGGCATTCTCG
GTTTCGGACTGATTTTGTTTGTATTAAGGCCGCTGGTTAAGCACTTGACTCGTACAGCGCAAATGACTGCTCCTAGGATT
GAGCCCGTTGCATTAAGTGCAGCTCCTGCTGGCGCGTTAGATGGACCTGTTGCCGATGCTGCATCAAATCAGCCACATCA
GTTACCGAGTGCCGAGTGGCTAGGTAGTCAAGGTTTACCCGAACCTGGCTCACCTTTGACCGTTAAAATGGAGCATTTGG
CCTTGCTCGCAAATAAAGAACCCGCGCGTGTTGCAGAAGTGATAGCTCATTGGATAGGCGATAAAGACGGTGAATAA

Upstream 100 bases:

>100_bases
AAAGGCCAGTTTGTCCTTTGCGACTATGCTCCAAATTCGTAATCGTCTTGTGCAAGCATTTGACGATGTAATGAAGATGC
CTATTTAAGGAATTGTGTGA

Downstream 100 bases:

>100_bases
TTCAATCGAAATCAAGATGGACAATTATGCCCAAGCGGCCATGTTATTGCTGAGTATGGGAGAAGAAGGTGCTGCCATGG
TGATGGCGCATTTGGATCGT

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MSTTFVQSGQDITGTESSSGFIAGMTQKWHRFNRGDRQVIALALLAVVVASVIVLMLWTATAGYRPLYGSQENVDTSQVL
NVLDAEGIDYRLDANSGAVLVAEEQVGNARMILAAKGVKAKVPSGMEALDNTALGTSQFMEQAKYRNSLEGELARTIMSL
KLVRAARVHLAIPKQTLFIRQEPELPTASVMLQLDPNTRLSESQVEAIVNLVAGSVTGLTASNIKVVDQDGRYLSENISG
NQDLSQSRNKQLQYTRELENSLVANASSMLEPVLGQENFQVRVTAKVNFNQVEETKESLDPQNVVTQERTSVDDSSNSIA
AGIPGALSNKPPQAGKAAADDKTRNLKQEESRQYDVGRSVRHVRYQQMQLENLSVSVLINSATSQGAFNDEAQLAKFGNM
VKDAIGFSAARGDSFTINAFEFTPTVTAEFTPSPWWQSENYQAYLRYIIGGILGFGLILFVLRPLVKHLTRTAQMTAPRI
EPVALSAAPAGALDGPVADAASNQPHQLPSAEWLGSQGLPEPGSPLTVKMEHLALLANKEPARVAEVIAHWIGDKDGE

Sequences:

>Translated_558_residues
MSTTFVQSGQDITGTESSSGFIAGMTQKWHRFNRGDRQVIALALLAVVVASVIVLMLWTATAGYRPLYGSQENVDTSQVL
NVLDAEGIDYRLDANSGAVLVAEEQVGNARMILAAKGVKAKVPSGMEALDNTALGTSQFMEQAKYRNSLEGELARTIMSL
KLVRAARVHLAIPKQTLFIRQEPELPTASVMLQLDPNTRLSESQVEAIVNLVAGSVTGLTASNIKVVDQDGRYLSENISG
NQDLSQSRNKQLQYTRELENSLVANASSMLEPVLGQENFQVRVTAKVNFNQVEETKESLDPQNVVTQERTSVDDSSNSIA
AGIPGALSNKPPQAGKAAADDKTRNLKQEESRQYDVGRSVRHVRYQQMQLENLSVSVLINSATSQGAFNDEAQLAKFGNM
VKDAIGFSAARGDSFTINAFEFTPTVTAEFTPSPWWQSENYQAYLRYIIGGILGFGLILFVLRPLVKHLTRTAQMTAPRI
EPVALSAAPAGALDGPVADAASNQPHQLPSAEWLGSQGLPEPGSPLTVKMEHLALLANKEPARVAEVIAHWIGDKDGE
>Mature_557_residues
STTFVQSGQDITGTESSSGFIAGMTQKWHRFNRGDRQVIALALLAVVVASVIVLMLWTATAGYRPLYGSQENVDTSQVLN
VLDAEGIDYRLDANSGAVLVAEEQVGNARMILAAKGVKAKVPSGMEALDNTALGTSQFMEQAKYRNSLEGELARTIMSLK
LVRAARVHLAIPKQTLFIRQEPELPTASVMLQLDPNTRLSESQVEAIVNLVAGSVTGLTASNIKVVDQDGRYLSENISGN
QDLSQSRNKQLQYTRELENSLVANASSMLEPVLGQENFQVRVTAKVNFNQVEETKESLDPQNVVTQERTSVDDSSNSIAA
GIPGALSNKPPQAGKAAADDKTRNLKQEESRQYDVGRSVRHVRYQQMQLENLSVSVLINSATSQGAFNDEAQLAKFGNMV
KDAIGFSAARGDSFTINAFEFTPTVTAEFTPSPWWQSENYQAYLRYIIGGILGFGLILFVLRPLVKHLTRTAQMTAPRIE
PVALSAAPAGALDGPVADAASNQPHQLPSAEWLGSQGLPEPGSPLTVKMEHLALLANKEPARVAEVIAHWIGDKDGE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=444, Percent_Identity=30.4054054054054, Blast_Score=217, Evalue=1e-57,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 60433; Mature: 60302

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTFVQSGQDITGTESSSGFIAGMTQKWHRFNRGDRQVIALALLAVVVASVIVLMLWTA
CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAGYRPLYGSQENVDTSQVLNVLDAEGIDYRLDANSGAVLVAEEQVGNARMILAAKGVKA
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCC
KVPSGMEALDNTALGTSQFMEQAKYRNSLEGELARTIMSLKLVRAARVHLAIPKQTLFIR
CCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEE
QEPELPTASVMLQLDPNTRLSESQVEAIVNLVAGSVTGLTASNIKVVDQDGRYLSENISG
CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEECCEEEEECCCCCHHHCCCC
NQDLSQSRNKQLQYTRELENSLVANASSMLEPVLGQENFQVRVTAKVNFNQVEETKESLD
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHCC
PQNVVTQERTSVDDSSNSIAAGIPGALSNKPPQAGKAAADDKTRNLKQEESRQYDVGRSV
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHH
RHVRYQQMQLENLSVSVLINSATSQGAFNDEAQLAKFGNMVKDAIGFSAARGDSFTINAF
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
EFTPTVTAEFTPSPWWQSENYQAYLRYIIGGILGFGLILFVLRPLVKHLTRTAQMTAPRI
EECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EPVALSAAPAGALDGPVADAASNQPHQLPSAEWLGSQGLPEPGSPLTVKMEHLALLANKE
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEHHHHHHHCCCC
PARVAEVIAHWIGDKDGE
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STTFVQSGQDITGTESSSGFIAGMTQKWHRFNRGDRQVIALALLAVVVASVIVLMLWTA
CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAGYRPLYGSQENVDTSQVLNVLDAEGIDYRLDANSGAVLVAEEQVGNARMILAAKGVKA
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCC
KVPSGMEALDNTALGTSQFMEQAKYRNSLEGELARTIMSLKLVRAARVHLAIPKQTLFIR
CCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEE
QEPELPTASVMLQLDPNTRLSESQVEAIVNLVAGSVTGLTASNIKVVDQDGRYLSENISG
CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEECCEEEEECCCCCHHHCCCC
NQDLSQSRNKQLQYTRELENSLVANASSMLEPVLGQENFQVRVTAKVNFNQVEETKESLD
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHCC
PQNVVTQERTSVDDSSNSIAAGIPGALSNKPPQAGKAAADDKTRNLKQEESRQYDVGRSV
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHH
RHVRYQQMQLENLSVSVLINSATSQGAFNDEAQLAKFGNMVKDAIGFSAARGDSFTINAF
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
EFTPTVTAEFTPSPWWQSENYQAYLRYIIGGILGFGLILFVLRPLVKHLTRTAQMTAPRI
EECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EPVALSAAPAGALDGPVADAASNQPHQLPSAEWLGSQGLPEPGSPLTVKMEHLALLANKE
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEHHHHHHHCCCC
PARVAEVIAHWIGDKDGE
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8675317; 10984043 [H]