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The map label for this gene is lafA [H]

Identifier: 126176146

GI number: 126176146

Start: 4650520

End: 4651326

Strand: Reverse

Name: lafA [H]

Synonym: Sbal_3958

Alternate gene names: 126176146

Gene position: 4651326-4650520 (Counterclockwise)

Preceding gene: 126176147

Following gene: 126176145

Centisome position: 90.72

GC content: 44.36

Gene sequence:

>807_bases
ATGTTAGGTGTTCATACTAATTACGCTTCAATTGTTGCGCAGGGTGCTGTAAATAAAAGTAATAACCTATTAACTAATGC
TATGGAGCGTTTGTCTACTGGTTTACGTATCAATAGCGCTTCTGATGATGCTGCGGGTTTGCAAATTGCTAATCGCATGA
GCGCTAACGTGAAAGGTATGGAAACGGCTTCACGCAATATTTCTGACGCGACGTCTATGTTACAAACTGCCGATGGTGCG
TTAGAAGAATTAACAACTATTGCCAACCGCCAGAAAGAATTGGCCACTCAAGCGGCGAACGGTGTGAACTCTGCTGATGA
TTTAACTGCGCTGGATGCTGAATTTCAACAGCTAAGTTTAGAAGTTGATCGTATCGCAAAAAATACGACTTATGCGGGTA
ATAACTTGTTCACTGCTATAGATGGTGGTGTGACTTTCCAAATTGGTGCTGGCACAAGCGAAACGATGAAAGTGACAAGT
GCAGCCCCAGTTGCGCTGGCCAATACTGTGAAACTGGATACTGGCGATAACGCAAGGTTAGCAATTACCGCAGTTGATGA
TTTTATTAAGACAGTGGGCACTTCACGCTCAACTTTAGGTGCCAACATTAACCGTCTTGGCCATACAGCGGCTAACCTTG
CCAGTGTAACTGAAAATACTAAAGCCGCTGCTGGCCGTATTATGGATGCCGATTTTGCGGTTGAATCTGCCAATATGACG
CGCAACCAATTATTAGTTCAAGCGGGTACAACGGTTCTGTCTTCAGCTAACCAAAATACGGGTTTAGTGATGGGTCTACT
GCGCTAA

Upstream 100 bases:

>100_bases
TTTCAAATCGGTTTTAGTTGTGGGCTTGTGTAGTCGCTTTAGTTAGTTATGCCTGGATTCAGGCCTAACCAAAACAATCG
TTATTTTCTGGAGAACTACT

Downstream 100 bases:

>100_bases
TTACAGTTAATTAGTCAGCTAGTCAGTGTTAGTTTTAATGCCAGTGAGCTTAGCTTGCTGGCATTTTTTATGGTGTTCTG
TGTATTTCATCTAACCCTAA

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGMETASRNISDATSMLQTADGA
LEELTTIANRQKELATQAANGVNSADDLTALDAEFQQLSLEVDRIAKNTTYAGNNLFTAIDGGVTFQIGAGTSETMKVTS
AAPVALANTVKLDTGDNARLAITAVDDFIKTVGTSRSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMT
RNQLLVQAGTTVLSSANQNTGLVMGLLR

Sequences:

>Translated_268_residues
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGMETASRNISDATSMLQTADGA
LEELTTIANRQKELATQAANGVNSADDLTALDAEFQQLSLEVDRIAKNTTYAGNNLFTAIDGGVTFQIGAGTSETMKVTS
AAPVALANTVKLDTGDNARLAITAVDDFIKTVGTSRSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMT
RNQLLVQAGTTVLSSANQNTGLVMGLLR
>Mature_268_residues
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGMETASRNISDATSMLQTADGA
LEELTTIANRQKELATQAANGVNSADDLTALDAEFQQLSLEVDRIAKNTTYAGNNLFTAIDGGVTFQIGAGTSETMKVTS
AAPVALANTVKLDTGDNARLAITAVDDFIKTVGTSRSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMT
RNQLLVQAGTTVLSSANQNTGLVMGLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Essential for lateral flagellar synthesis and swarming motility [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=155, Percent_Identity=41.2903225806452, Blast_Score=120, Evalue=8e-29,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 27795; Mature: 27795

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCH
ETASRNISDATSMLQTADGALEELTTIANRQKELATQAANGVNSADDLTALDAEFQQLSL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EVDRIAKNTTYAGNNLFTAIDGGVTFQIGAGTSETMKVTSAAPVALANTVKLDTGDNARL
HHHHHHCCCEECCCCEEEEECCCEEEEECCCCCHHEEECCCCCEEEEEEEEEECCCCCEE
AITAVDDFIKTVGTSRSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMT
EEEEHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCEECCCCEEECCCCH
RNQLLVQAGTTVLSSANQNTGLVMGLLR
HHHEEHHHCCHHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCH
ETASRNISDATSMLQTADGALEELTTIANRQKELATQAANGVNSADDLTALDAEFQQLSL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EVDRIAKNTTYAGNNLFTAIDGGVTFQIGAGTSETMKVTSAAPVALANTVKLDTGDNARL
HHHHHHCCCEECCCCEEEEECCCEEEEECCCCCHHEEECCCCCEEEEEEEEEECCCCCEE
AITAVDDFIKTVGTSRSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMT
EEEEHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCEECCCCEEECCCCH
RNQLLVQAGTTVLSSANQNTGLVMGLLR
HHHEEHHHCCHHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]